RNA–Protein interactions for RNA: ENST00000520522.1

CTNNA1-224, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 390 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-224ENST00000520522 APBA3O96018 575 aa12.73□□□□□ -0.37
CTNNA1-224ENST00000520522 ABCC6O95255 1503 aa12.72□□□□□ -0.37
CTNNA1-224ENST00000520522 OVOS2A0A0G2JMS6 1433 aa12.72□□□□□ -0.37
CTNNA1-224ENST00000520522 OVOS2A0A0J9YW53 1432 aa12.72□□□□□ -0.37
CTNNA1-224ENST00000520522 OVOS2Q6IE36 1432 aa12.72□□□□□ -0.37
CTNNA1-224ENST00000520522 TTC21BQ7Z4L5 1316 aa12.72□□□□□ -0.37
CTNNA1-224ENST00000520522 PEAK1Q9H792 1746 aa12.72□□□□□ -0.37
CTNNA1-224ENST00000520522 NEUROD1Q13562 356 aa12.72□□□□□ -0.37
CTNNA1-224ENST00000520522 R3HDM1Q15032 1099 aaKnown RBP12.72□□□□□ -0.37
CTNNA1-224ENST00000520522 KCNH5Q8NCM2 988 aa12.72□□□□□ -0.37
CTNNA1-224ENST00000520522 LRRC37A3O60309 1634 aa12.72□□□□□ -0.37
CTNNA1-224ENST00000520522 NUP188Q5SRE5 1749 aa12.71□□□□□ -0.37
CTNNA1-224ENST00000520522 WDR17Q8IZU2 1322 aa12.71□□□□□ -0.37
CTNNA1-224ENST00000520522 WNK3Q9BYP7 1800 aa12.71□□□□□ -0.38
CTNNA1-224ENST00000520522 MON2Q7Z3U7 1717 aa12.71□□□□□ -0.38
CTNNA1-224ENST00000520522 ARHGEF25Q86VW2 580 aa12.7□□□□□ -0.38
CTNNA1-224ENST00000520522 NFAT5O94916 1531 aa12.7□□□□□ -0.38
CTNNA1-224ENST00000520522 RGPD3A6NKT7 1758 aaPredicted RBP12.7□□□□□ -0.38
CTNNA1-224ENST00000520522 RGPD4Q7Z3J3 1758 aa12.7□□□□□ -0.38
CTNNA1-224ENST00000520522 USP54Q70EL1 1684 aa12.7□□□□□ -0.38
CTNNA1-224ENST00000520522 KTN1Q86UP2 1357 aaKnown RBP12.69□□□□□ -0.38
CTNNA1-224ENST00000520522 ZBTB7CA1YPR0 619 aa12.69□□□□□ -0.38
CTNNA1-224ENST00000520522 TOM1L2Q6ZVM7 507 aa12.69□□□□□ -0.38
CTNNA1-224ENST00000520522 CDCA7Q9BWT1 371 aaPredicted RBP12.69□□□□□ -0.38
CTNNA1-224ENST00000520522 BCL9O00512 1426 aa12.69□□□□□ -0.38
CTNNA1-224ENST00000520522 DDB1Q16531 1140 aa12.68□□□□□ -0.38
CTNNA1-224ENST00000520522 AXIN2Q9Y2T1 843 aa12.68□□□□□ -0.38
CTNNA1-224ENST00000520522 USP31Q70CQ4 1352 aa12.68□□□□□ -0.38
CTNNA1-224ENST00000520522 NBPF14Q5TI25 921 aa12.67□□□□□ -0.38
CTNNA1-224ENST00000520522 CARD10Q9BWT7 1032 aa12.67□□□□□ -0.38
CTNNA1-224ENST00000520522 CARD11Q9BXL7 1154 aa12.67□□□□□ -0.38
CTNNA1-224ENST00000520522 SBF2Q86WG5 1849 aa12.67□□□□□ -0.38
CTNNA1-224ENST00000520522 CD163L1Q9NR16 1453 aa12.66□□□□□ -0.38
CTNNA1-224ENST00000520522 CCDC7Q96M83 1385 aa12.66□□□□□ -0.38
CTNNA1-224ENST00000520522 PLSCR1O15162 318 aa12.65□□□□□ -0.38
CTNNA1-224ENST00000520522 RGPD5Q99666 1765 aa12.65□□□□□ -0.38
CTNNA1-224ENST00000520522 PUS7Q96PZ0 661 aaKnown RBP12.64□□□□□ -0.39
CTNNA1-224ENST00000520522 BCL11BQ9C0K0 894 aaPredicted RBP12.64□□□□□ -0.39
CTNNA1-224ENST00000520522 TONSLQ96HA7 1378 aa12.64□□□□□ -0.39
CTNNA1-224ENST00000520522 TNS2Q63HR2 1409 aa12.63□□□□□ -0.39
CTNNA1-224ENST00000520522 EDC4Q6P2E9 1401 aaKnown RBP12.63□□□□□ -0.39
CTNNA1-224ENST00000520522 SOX12O15370 315 aa12.63□□□□□ -0.39
CTNNA1-224ENST00000520522 CSB-PGBD3P0DP91 1061 aa12.63□□□□□ -0.39
CTNNA1-224ENST00000520522 MARCH10Q8NA82 808 aaPredicted RBP12.63□□□□□ -0.39
CTNNA1-224ENST00000520522 HDGFL2Q7Z4V5 671 aaPredicted RBP12.62□□□□□ -0.39
CTNNA1-224ENST00000520522 ERBB3P21860 1342 aa12.62□□□□□ -0.39
CTNNA1-224ENST00000520522 NINLQ9Y2I6 1382 aa12.61□□□□□ -0.39
CTNNA1-224ENST00000520522 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.61□□□□□ -0.39
CTNNA1-224ENST00000520522 A0A1W2PP64 1363 aa12.6□□□□□ -0.39
CTNNA1-224ENST00000520522 DCAF8L1A6NGE4 600 aa12.6□□□□□ -0.39
CTNNA1-224ENST00000520522 EXOC5O00471 708 aa12.6□□□□□ -0.39
CTNNA1-224ENST00000520522 NME9Q86XW9 330 aa12.6□□□□□ -0.39
CTNNA1-224ENST00000520522 TMC1Q8TDI8 760 aa12.6□□□□□ -0.39
CTNNA1-224ENST00000520522 TERF2IPQ9NYB0 399 aa12.6□□□□□ -0.39
CTNNA1-224ENST00000520522 LTN1O94822 1766 aa12.6□□□□□ -0.39
CTNNA1-224ENST00000520522 SLC24A1O60721 1099 aa12.59□□□□□ -0.39
CTNNA1-224ENST00000520522 SLC12A5Q9H2X9 1139 aa12.59□□□□□ -0.39
CTNNA1-224ENST00000520522 SPON1Q9HCB6 807 aa12.59□□□□□ -0.39
CTNNA1-224ENST00000520522 NHSQ6T4R5 1651 aa12.58□□□□□ -0.4
CTNNA1-224ENST00000520522 KCNQ2O43526 872 aa12.58□□□□□ -0.4
CTNNA1-224ENST00000520522 PTF1AQ7RTS3 328 aa12.58□□□□□ -0.4
CTNNA1-224ENST00000520522 ANO8Q9HCE9 1232 aaPredicted RBP12.58□□□□□ -0.4
CTNNA1-224ENST00000520522 CASZ1Q86V15 1759 aa12.58□□□□□ -0.4
CTNNA1-224ENST00000520522 TESK2Q96S53 571 aa12.57□□□□□ -0.4
CTNNA1-224ENST00000520522 IL2RBP14784 551 aa12.56□□□□□ -0.4
CTNNA1-224ENST00000520522 PROM2Q8N271 834 aa12.56□□□□□ -0.4
CTNNA1-224ENST00000520522 ANKRD24Q8TF21 1146 aa12.56□□□□□ -0.4
CTNNA1-224ENST00000520522 NLRP2Q9NX02 1062 aa12.56□□□□□ -0.4
CTNNA1-224ENST00000520522 FAM208AQ9UK61 1670 aaKnown RBP12.56□□□□□ -0.4
CTNNA1-224ENST00000520522 ST20-MTHFSA0A0A6YYL1 179 aa12.54□□□□□ -0.4
CTNNA1-224ENST00000520522 TXNRD1Q16881 649 aa12.54□□□□□ -0.4
CTNNA1-224ENST00000520522 IP6K1Q92551 441 aa12.54□□□□□ -0.4
CTNNA1-224ENST00000520522 PPP1R1BQ9UD71 204 aaPredicted RBP12.54□□□□□ -0.4
CTNNA1-224ENST00000520522 STK32BQ9NY57 414 aa12.53□□□□□ -0.4
CTNNA1-224ENST00000520522 ANKRD36BQ8N2N9 1353 aa12.53□□□□□ -0.4
CTNNA1-224ENST00000520522 PAPPAQ13219 1627 aa12.52□□□□□ -0.4
CTNNA1-224ENST00000520522 SLC15A2Q16348 729 aa12.52□□□□□ -0.41
CTNNA1-224ENST00000520522 COG3Q96JB2 828 aa12.52□□□□□ -0.41
CTNNA1-224ENST00000520522 BTAF1O14981 1849 aa12.51□□□□□ -0.41
CTNNA1-224ENST00000520522 ACSBG1Q96GR2 724 aa12.51□□□□□ -0.41
CTNNA1-224ENST00000520522 RTL1A6NKG5 1358 aa12.51□□□□□ -0.41
CTNNA1-224ENST00000520522 MAP3K19Q56UN5 1328 aa12.5□□□□□ -0.41
CTNNA1-224ENST00000520522 USP47Q96K76 1375 aa12.49□□□□□ -0.41
CTNNA1-224ENST00000520522 HOXC9P31274 260 aa12.49□□□□□ -0.41
CTNNA1-224ENST00000520522 PDGFDQ9GZP0 370 aaPredicted RBP12.49□□□□□ -0.41
CTNNA1-224ENST00000520522 MYOM1P52179 1685 aa12.48□□□□□ -0.41
CTNNA1-224ENST00000520522 ZBTB7AO95365 584 aa12.48□□□□□ -0.41
CTNNA1-224ENST00000520522 PTGER2P43116 358 aa12.48□□□□□ -0.41
CTNNA1-224ENST00000520522 TMF1P82094 1093 aa12.48□□□□□ -0.41
CTNNA1-224ENST00000520522 TRIM26Q12899 539 aaPredicted RBP12.48□□□□□ -0.41
CTNNA1-224ENST00000520522 MTFR1LQ9H019 292 aa12.48□□□□□ -0.41
CTNNA1-224ENST00000520522 AMPHP49418 695 aa12.47□□□□□ -0.41
CTNNA1-224ENST00000520522 KAT6BQ8WYB5 2073 aa12.47□□□□□ -0.41
CTNNA1-224ENST00000520522 SLC4A2P04920 1241 aa12.46□□□□□ -0.41
CTNNA1-224ENST00000520522 YY1P25490 414 aa12.46□□□□□ -0.41
CTNNA1-224ENST00000520522 CDCA8Q53HL2 280 aa12.46□□□□□ -0.41
CTNNA1-224ENST00000520522 SLC27A3Q5K4L6 730 aa12.46□□□□□ -0.41
CTNNA1-224ENST00000520522 LTV1Q96GA3 475 aaPredicted RBP12.46□□□□□ -0.41
CTNNA1-224ENST00000520522 QSER1Q2KHR3 1735 aa12.45□□□□□ -0.42
CTNNA1-224ENST00000520522 SHANK3Q9BYB0 1731 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms