RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 C6orf118Q5T5N4 469 aa9.91□□□□□ -0.82
SKP1-207ENST00000520417 MRPL14Q6P1L8 145 aaKnown RBP9.91□□□□□ -0.82
SKP1-207ENST00000520417 DZIP3Q86Y13 1208 aaKnown RBP9.91□□□□□ -0.82
SKP1-207ENST00000520417 ZFP42Q96MM3 310 aa9.91□□□□□ -0.82
SKP1-207ENST00000520417 OCSTAMPQ9BR26 566 aa9.91□□□□□ -0.82
SKP1-207ENST00000520417 GPSM3Q9Y4H4 160 aa9.91□□□□□ -0.82
SKP1-207ENST00000520417 KLF16Q9BXK1 252 aaPredicted RBP9.9□□□□□ -0.82
SKP1-207ENST00000520417 UPP2O95045 317 aa9.89□□□□□ -0.83
SKP1-207ENST00000520417 SNRKQ9NRH2 765 aa9.89□□□□□ -0.83
SKP1-207ENST00000520417 CDV3Q9UKY7 258 aaKnown RBP9.89□□□□□ -0.83
SKP1-207ENST00000520417 EMILIN1Q9Y6C2 1016 aa9.89□□□□□ -0.83
SKP1-207ENST00000520417 BANK1Q8NDB2 785 aa9.88□□□□□ -0.83
SKP1-207ENST00000520417 GJD4Q96KN9 370 aaPredicted RBP9.88□□□□□ -0.83
SKP1-207ENST00000520417 BMP2P12643 396 aa9.87□□□□□ -0.83
SKP1-207ENST00000520417 PPP1R26Q5T8A7 1209 aaPredicted RBP9.87□□□□□ -0.83
SKP1-207ENST00000520417 PGPEP1Q9NXJ5 209 aa9.87□□□□□ -0.83
SKP1-207ENST00000520417 PCDHB9Q9Y5E1 797 aa9.87□□□□□ -0.83
SKP1-207ENST00000520417 ZBBXA8MT70 800 aa9.86□□□□□ -0.83
SKP1-207ENST00000520417 NBPF20Q3BBV1 942 aa9.86□□□□□ -0.83
SKP1-207ENST00000520417 DHX9Q08211 1270 aaKnown RBP9.85□□□□□ -0.83
SKP1-207ENST00000520417 INTS6LQ5JSJ4 861 aaKnown RBP9.85□□□□□ -0.83
SKP1-207ENST00000520417 MTMR14Q8NCE2 650 aa9.85□□□□□ -0.83
SKP1-207ENST00000520417 NDUFB9Q9Y6M9 179 aa9.85□□□□□ -0.83
SKP1-207ENST00000520417 APBB1O00213 710 aa9.84□□□□□ -0.83
SKP1-207ENST00000520417 CBLBQ13191 982 aa9.84□□□□□ -0.83
SKP1-207ENST00000520417 LINC00528Q8N1L1 170 aa9.84□□□□□ -0.83
SKP1-207ENST00000520417 SOBPA7XYQ1 873 aa9.83□□□□□ -0.84
SKP1-207ENST00000520417 FBXO45P0C2W1 286 aa9.83□□□□□ -0.84
SKP1-207ENST00000520417 MEIOBQ8N635 442 aa9.82□□□□□ -0.84
SKP1-207ENST00000520417 TMPRSS4Q9NRS4 437 aa9.82□□□□□ -0.84
SKP1-207ENST00000520417 MAN1A2O60476 641 aa9.81□□□□□ -0.84
SKP1-207ENST00000520417 WFS1O76024 890 aa9.81□□□□□ -0.84
SKP1-207ENST00000520417 TREML4Q6UXN2 200 aa9.81□□□□□ -0.84
SKP1-207ENST00000520417 TSEN34Q9BSV6 310 aaKnown RBP9.8□□□□□ -0.84
SKP1-207ENST00000520417 PRM3Q9NNZ6 103 aa9.8□□□□□ -0.84
SKP1-207ENST00000520417 ERVH48-1M5A8F1 160 aa9.79□□□□□ -0.84
SKP1-207ENST00000520417 TERTO14746 1132 aaKnown RBP9.79□□□□□ -0.84
SKP1-207ENST00000520417 VEGFBP49765 207 aa9.79□□□□□ -0.84
SKP1-207ENST00000520417 AGBL1Q96MI9 1066 aa9.79□□□□□ -0.84
SKP1-207ENST00000520417 ZNF330Q9Y3S2 320 aaPredicted RBP9.79□□□□□ -0.84
SKP1-207ENST00000520417 RELBQ01201 579 aa9.78□□□□□ -0.84
SKP1-207ENST00000520417 NR1H3Q13133 447 aa9.78□□□□□ -0.84
SKP1-207ENST00000520417 TBC1D2BQ9UPU7 963 aa9.78□□□□□ -0.84
SKP1-207ENST00000520417 GIGYF1O75420 1035 aaPredicted RBP9.77□□□□□ -0.85
SKP1-207ENST00000520417 ZNF784Q8NCA9 323 aaPredicted RBP9.77□□□□□ -0.85
SKP1-207ENST00000520417 NXF1Q9UBU9 619 aaKnown RBP9.77□□□□□ -0.85
SKP1-207ENST00000520417 SLC16A10Q8TF71 515 aa9.76□□□□□ -0.85
SKP1-207ENST00000520417 CYLDQ9NQC7 956 aa9.76□□□□□ -0.85
SKP1-207ENST00000520417 FIGNL2A6NMB9 653 aa9.75□□□□□ -0.85
SKP1-207ENST00000520417 NFX1Q12986 1120 aaKnown RBP9.75□□□□□ -0.85
SKP1-207ENST00000520417 Q6ZVU0 165 aa9.75□□□□□ -0.85
SKP1-207ENST00000520417 ZNF395Q9H8N7 513 aaPredicted RBP9.75□□□□□ -0.85
SKP1-207ENST00000520417 TTLL8A6PVC2 850 aa9.73□□□□□ -0.85
SKP1-207ENST00000520417 ESPNB1AK53 854 aa9.73□□□□□ -0.85
SKP1-207ENST00000520417 SOCS7O14512 581 aa9.73□□□□□ -0.85
SKP1-207ENST00000520417 ABL2P42684 1182 aa9.73□□□□□ -0.85
SKP1-207ENST00000520417 POLMQ9NP87 494 aaPredicted RBP9.73□□□□□ -0.85
SKP1-207ENST00000520417 SEPT12Q8IYM1 358 aa9.72□□□□□ -0.85
SKP1-207ENST00000520417 ZNF592Q92610 1267 aa9.72□□□□□ -0.85
SKP1-207ENST00000520417 GDPD2Q9HCC8 539 aa9.72□□□□□ -0.85
SKP1-207ENST00000520417 DNMT3LQ9UJW3 386 aa9.72□□□□□ -0.85
SKP1-207ENST00000520417 SOS2Q07890 1332 aaPredicted RBP9.72□□□□□ -0.85
SKP1-207ENST00000520417 GPR37L1O60883 481 aa9.71□□□□□ -0.86
SKP1-207ENST00000520417 ADD1P35611 737 aaKnown RBP9.71□□□□□ -0.86
SKP1-207ENST00000520417 RNF20Q5VTR2 975 aa9.71□□□□□ -0.86
SKP1-207ENST00000520417 INSM2Q96T92 566 aaPredicted RBP9.71□□□□□ -0.86
SKP1-207ENST00000520417 ESF1Q9H501 851 aaKnown RBP9.71□□□□□ -0.86
SKP1-207ENST00000520417 MCCD1P59942 119 aaPredicted RBP9.7□□□□□ -0.86
SKP1-207ENST00000520417 TRIM52Q96A61 297 aa9.7□□□□□ -0.86
SKP1-207ENST00000520417 SPINT1O43278 529 aa9.69□□□□□ -0.86
SKP1-207ENST00000520417 LILRA1O75019 489 aa9.69□□□□□ -0.86
SKP1-207ENST00000520417 ADH1AP07327 375 aa9.69□□□□□ -0.86
SKP1-207ENST00000520417 CTSOP43234 321 aaPredicted RBP9.69□□□□□ -0.86
SKP1-207ENST00000520417 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.69□□□□□ -0.866e-7■□□□□ 11.1
SKP1-207ENST00000520417 PCDHB11Q9Y5F2 797 aa9.69□□□□□ -0.86
SKP1-207ENST00000520417 VAC14Q08AM6 782 aa9.68□□□□□ -0.86
SKP1-207ENST00000520417 LCE2AQ5TA79 106 aaPredicted RBP9.68□□□□□ -0.86
SKP1-207ENST00000520417 EIF4G2P78344 907 aaKnown RBP eCLIP9.67□□□□□ -0.86
SKP1-207ENST00000520417 IRF7Q92985 503 aa9.67□□□□□ -0.86
SKP1-207ENST00000520417 PTGIRP43119 386 aa9.66□□□□□ -0.86
SKP1-207ENST00000520417 MCM6Q14566 821 aa9.66□□□□□ -0.86
SKP1-207ENST00000520417 ATP5J2-PTCD1G3V325 749 aa9.65□□□□□ -0.86
SKP1-207ENST00000520417 H3BM21 787 aa9.65□□□□□ -0.86
SKP1-207ENST00000520417 IRF5Q13568 498 aa9.65□□□□□ -0.86
SKP1-207ENST00000520417 CC2D2BQ6DHV5 1058 aa9.65□□□□□ -0.86
SKP1-207ENST00000520417 NPAS3Q8IXF0 933 aa9.65□□□□□ -0.86
SKP1-207ENST00000520417 CEP126Q9P2H0 1117 aa9.65□□□□□ -0.86
SKP1-207ENST00000520417 MEN1O00255 615 aa9.64□□□□□ -0.87
SKP1-207ENST00000520417 LCE2CQ5TA81 110 aa9.64□□□□□ -0.87
SKP1-207ENST00000520417 PPFIA3O75145 1194 aa9.63□□□□□ -0.87
SKP1-207ENST00000520417 GMPRP36959 345 aa9.63□□□□□ -0.87
SKP1-207ENST00000520417 SCTRP47872 440 aa9.63□□□□□ -0.87
SKP1-207ENST00000520417 PTSQ03393 145 aa9.63□□□□□ -0.87
SKP1-207ENST00000520417 CCDC125Q86Z20 511 aa9.63□□□□□ -0.87
SKP1-207ENST00000520417 ERBB4Q15303 1308 aa9.62□□□□□ -0.87
SKP1-207ENST00000520417 SLFNL1Q499Z3 407 aa9.62□□□□□ -0.87
SKP1-207ENST00000520417 ERVK-9P63128 1117 aa9.61□□□□□ -0.87
SKP1-207ENST00000520417 KDF1Q8NAX2 398 aaPredicted RBP9.61□□□□□ -0.87
SKP1-207ENST00000520417 RNF217Q8TC41 542 aa9.61□□□□□ -0.87
SKP1-207ENST00000520417 MYCP01106 439 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms