RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 PEAK1Q9H792 1746 aa23.98■■□□□ 1.43
SDC2-205ENST00000520233 FAM83GA6ND36 823 aa23.98■■□□□ 1.43
SDC2-205ENST00000520233 INSRP06213 1382 aa23.97■■□□□ 1.43
SDC2-205ENST00000520233 CHRNA2Q15822 529 aa23.97■■□□□ 1.43
SDC2-205ENST00000520233 CFAP53Q96M91 514 aa23.96■■□□□ 1.43
SDC2-205ENST00000520233 COL18A1P39060 1754 aa23.96■■□□□ 1.43
SDC2-205ENST00000520233 BLMP54132 1417 aaPredicted RBP23.95■■□□□ 1.42
SDC2-205ENST00000520233 COL14A1Q05707 1796 aaKnown RBP23.95■■□□□ 1.42
SDC2-205ENST00000520233 HSP90AB2PQ58FF8 381 aa23.94■■□□□ 1.42
SDC2-205ENST00000520233 AXIN2Q9Y2T1 843 aa23.94■■□□□ 1.42
SDC2-205ENST00000520233 LMO7Q8WWI1 1683 aa23.93■■□□□ 1.42
SDC2-205ENST00000520233 CCER2I3L3R5 266 aa23.92■■□□□ 1.42
SDC2-205ENST00000520233 MEX3CQ5U5Q3 659 aaKnown RBP23.92■■□□□ 1.42
SDC2-205ENST00000520233 COL3A1P02461 1466 aaPredicted RBP23.91■■□□□ 1.42
SDC2-205ENST00000520233 CAMTA1Q9Y6Y1 1673 aa23.91■■□□□ 1.42
SDC2-205ENST00000520233 C8orf37Q96NL8 207 aa23.9■■□□□ 1.42
SDC2-205ENST00000520233 CCDC184Q52MB2 194 aa23.89■■□□□ 1.41
SDC2-205ENST00000520233 NGLY1Q96IV0 654 aa23.89■■□□□ 1.41
SDC2-205ENST00000520233 BTG4Q9NY30 223 aa23.89■■□□□ 1.41
SDC2-205ENST00000520233 DIAPH1O60610 1272 aaKnown RBP23.88■■□□□ 1.41
SDC2-205ENST00000520233 EIF4A2Q14240 407 aaKnown RBP23.88■■□□□ 1.41
SDC2-205ENST00000520233 ANKRD24Q8TF21 1146 aa23.88■■□□□ 1.41
SDC2-205ENST00000520233 MRS2Q9HD23 443 aa23.88■■□□□ 1.41
SDC2-205ENST00000520233 SLIT2O94813 1529 aa23.88■■□□□ 1.41
SDC2-205ENST00000520233 PLCH1Q4KWH8 1693 aa23.87■■□□□ 1.41
SDC2-205ENST00000520233 ERBB3P21860 1342 aa23.86■■□□□ 1.41
SDC2-205ENST00000520233 IL13P35225 146 aa23.86■■□□□ 1.41
SDC2-205ENST00000520233 FNBP4Q8N3X1 1017 aaPredicted RBP23.86■■□□□ 1.41
SDC2-205ENST00000520233 COL5A2P05997 1499 aaPredicted RBP23.86■■□□□ 1.41
SDC2-205ENST00000520233 RGPD5Q99666 1765 aa23.86■■□□□ 1.41
SDC2-205ENST00000520233 LTV1Q96GA3 475 aaPredicted RBP23.85■■□□□ 1.41
SDC2-205ENST00000520233 NWD2Q9ULI1 1742 aa23.84■■□□□ 1.41
SDC2-205ENST00000520233 EVA1CP58658 441 aa23.84■■□□□ 1.41
SDC2-205ENST00000520233 NUDCQ9Y266 331 aa23.84■■□□□ 1.41
SDC2-205ENST00000520233 STRN4Q9NRL3 753 aa23.83■■□□□ 1.41
SDC2-205ENST00000520233 WDR17Q8IZU2 1322 aa23.83■■□□□ 1.4
SDC2-205ENST00000520233 CSB-PGBD3P0DP91 1061 aa23.82■■□□□ 1.4
SDC2-205ENST00000520233 UNC5CLQ8IV45 518 aa23.81■■□□□ 1.4
SDC2-205ENST00000520233 NRAPQ86VF7 1730 aa23.81■■□□□ 1.4
SDC2-205ENST00000520233 BCL9LQ86UU0 1499 aa23.81■■□□□ 1.4
SDC2-205ENST00000520233 USP21Q9UK80 565 aa23.8■■□□□ 1.4
SDC2-205ENST00000520233 AFF2P51816 1311 aa23.8■■□□□ 1.4
SDC2-205ENST00000520233 U2SURPO15042 1029 aaKnown RBP23.79■■□□□ 1.4
SDC2-205ENST00000520233 PNISRQ8TF01 805 aaKnown RBP23.79■■□□□ 1.4
SDC2-205ENST00000520233 EYA1Q99502 592 aa23.79■■□□□ 1.4
SDC2-205ENST00000520233 IGSF1Q8N6C5 1336 aa23.79■■□□□ 1.4
SDC2-205ENST00000520233 NBPF6Q5VWK0 638 aa23.78■■□□□ 1.4
SDC2-205ENST00000520233 LARP1Q6PKG0 1096 aaKnown RBP23.78■■□□□ 1.4
SDC2-205ENST00000520233 NBPF4Q96M43 638 aa23.78■■□□□ 1.4
SDC2-205ENST00000520233 FAM208AQ9UK61 1670 aaKnown RBP23.78■■□□□ 1.4
SDC2-205ENST00000520233 CRB1P82279 1406 aa23.77■■□□□ 1.4
SDC2-205ENST00000520233 RGPD1P0DJD0 1748 aa23.77■■□□□ 1.4
SDC2-205ENST00000520233 WDR43Q15061 677 aaKnown RBP eCLIP23.77■■□□□ 1.4
SDC2-205ENST00000520233 TOM1L2Q6ZVM7 507 aa23.77■■□□□ 1.4
SDC2-205ENST00000520233 NLRP2Q9NX02 1062 aa23.77■■□□□ 1.4
SDC2-205ENST00000520233 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.76■■□□□ 1.39
SDC2-205ENST00000520233 CARD10Q9BWT7 1032 aa23.76■■□□□ 1.39
SDC2-205ENST00000520233 U2AF1L5P0DN76 240 aaPredicted RBP23.75■■□□□ 1.39
SDC2-205ENST00000520233 U2AF1Q01081 240 aaKnown RBP eCLIP23.75■■□□□ 1.39
SDC2-205ENST00000520233 VPS72Q15906 364 aa23.75■■□□□ 1.39
SDC2-205ENST00000520233 NCAPD2Q15021 1401 aa23.75■■□□□ 1.39
SDC2-205ENST00000520233 SULT6B1Q6IMI4 303 aa23.72■■□□□ 1.39
SDC2-205ENST00000520233 USHBP1Q8N6Y0 703 aa23.72■■□□□ 1.39
SDC2-205ENST00000520233 ADAMTS8Q9UP79 889 aa23.72■■□□□ 1.39
SDC2-205ENST00000520233 RGPD2P0DJD1 1756 aa23.72■■□□□ 1.39
SDC2-205ENST00000520233 KDRP35968 1356 aa23.71■■□□□ 1.39
SDC2-205ENST00000520233 SPATA31A1Q5TZJ5 1347 aa23.71■■□□□ 1.39
SDC2-205ENST00000520233 SPATA31A5Q5VU36 1347 aa23.71■■□□□ 1.39
SDC2-205ENST00000520233 SPATA31A7Q8IWB4 1347 aa23.71■■□□□ 1.39
SDC2-205ENST00000520233 ZNF772Q68DY9 489 aaPredicted RBP23.71■■□□□ 1.39
SDC2-205ENST00000520233 TRPC5Q9UL62 973 aaPredicted RBP23.71■■□□□ 1.39
SDC2-205ENST00000520233 ATRNO75882 1429 aa23.7■■□□□ 1.38
SDC2-205ENST00000520233 FCHSD2O94868 740 aa23.7■■□□□ 1.38
SDC2-205ENST00000520233 HMOX1P09601 288 aa23.7■■□□□ 1.38
SDC2-205ENST00000520233 AEBP1Q8IUX7 1158 aa23.69■■□□□ 1.38
SDC2-205ENST00000520233 FAM9BQ8IZU0 186 aa23.69■■□□□ 1.38
SDC2-205ENST00000520233 THRAP3Q9Y2W1 955 aaKnown RBP23.69■■□□□ 1.38
SDC2-205ENST00000520233 CCDC9Q9Y3X0 531 aaKnown RBP23.69■■□□□ 1.38
SDC2-205ENST00000520233 TCP11L2Q8N4U5 519 aa23.68■■□□□ 1.38
SDC2-205ENST00000520233 RSPH6AQ9H0K4 717 aa23.68■■□□□ 1.38
SDC2-205ENST00000520233 PNNQ9H307 717 aaKnown RBP23.67■■□□□ 1.38
SDC2-205ENST00000520233 QTRT2Q9H974 415 aaKnown RBP23.67■■□□□ 1.38
SDC2-205ENST00000520233 USP35Q9P2H5 1018 aa23.67■■□□□ 1.38
SDC2-205ENST00000520233 GJD4Q96KN9 370 aaPredicted RBP23.65■■□□□ 1.38
SDC2-205ENST00000520233 PRKAR2BP31323 418 aa23.64■■□□□ 1.37
SDC2-205ENST00000520233 BARGINQ6ZT62 677 aa23.64■■□□□ 1.37
SDC2-205ENST00000520233 RAPGEF4Q8WZA2 1011 aa23.64■■□□□ 1.37
SDC2-205ENST00000520233 PHF23Q9BUL5 403 aaPredicted RBP23.64■■□□□ 1.37
SDC2-205ENST00000520233 PLEKHG2Q9H7P9 1386 aa23.64■■□□□ 1.37
SDC2-205ENST00000520233 IL2RBP14784 551 aa23.63■■□□□ 1.37
SDC2-205ENST00000520233 PLEKHF1Q96S99 279 aa23.63■■□□□ 1.37
SDC2-205ENST00000520233 TATP17735 454 aaPredicted RBP23.62■■□□□ 1.37
SDC2-205ENST00000520233 CDCA7Q9BWT1 371 aaPredicted RBP23.62■■□□□ 1.37
SDC2-205ENST00000520233 RGS17Q9UGC6 210 aaPredicted RBP23.62■■□□□ 1.37
SDC2-205ENST00000520233 DISP2A7MBM2 1401 aa23.61■■□□□ 1.37
SDC2-205ENST00000520233 RUNDC1Q96C34 613 aa23.61■■□□□ 1.37
SDC2-205ENST00000520233 GLI3P10071 1580 aa23.61■■□□□ 1.37
SDC2-205ENST00000520233 MEGF6O75095 1541 aa23.6■■□□□ 1.37
SDC2-205ENST00000520233 NEFMP07197 916 aa23.6■■□□□ 1.37
SDC2-205ENST00000520233 CCDC146Q8IYE0 955 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 201 ms