RNA–Protein interactions for RNA: ENST00000520126.1

CLK4-204, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 1,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-204ENST00000520126 AMPHP49418 695 aa23.57■■□□□ 1.36
CLK4-204ENST00000520126 AXIN2Q9Y2T1 843 aa23.57■■□□□ 1.36
CLK4-204ENST00000520126 RRS1Q15050 365 aaKnown RBP23.56■■□□□ 1.36
CLK4-204ENST00000520126 LARP1Q6PKG0 1096 aaKnown RBP23.56■■□□□ 1.36
CLK4-204ENST00000520126 AATKQ6ZMQ8 1374 aa23.56■■□□□ 1.36
CLK4-204ENST00000520126 KIF20BQ96Q89 1820 aa23.56■■□□□ 1.36
CLK4-204ENST00000520126 CAMTA1Q9Y6Y1 1673 aa23.55■■□□□ 1.36
CLK4-204ENST00000520126 NFAT5O94916 1531 aa23.55■■□□□ 1.36
CLK4-204ENST00000520126 FAM98CQ17RN3 349 aaKnown RBP23.54■■□□□ 1.36
CLK4-204ENST00000520126 TOM1L2Q6ZVM7 507 aa23.54■■□□□ 1.36
CLK4-204ENST00000520126 LTV1Q96GA3 475 aaPredicted RBP23.54■■□□□ 1.36
CLK4-204ENST00000520126 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.53■■□□□ 1.36
CLK4-204ENST00000520126 PPM1GO15355 546 aaPredicted RBP23.53■■□□□ 1.36
CLK4-204ENST00000520126 MORC1Q86VD1 984 aa23.52■■□□□ 1.36
CLK4-204ENST00000520126 NRAPQ86VF7 1730 aa23.51■■□□□ 1.35
CLK4-204ENST00000520126 USP54Q70EL1 1684 aa23.51■■□□□ 1.35
CLK4-204ENST00000520126 MAP3K19Q56UN5 1328 aa23.51■■□□□ 1.35
CLK4-204ENST00000520126 SPATA31A5Q5VU36 1347 aa23.51■■□□□ 1.35
CLK4-204ENST00000520126 SPATA31A7Q8IWB4 1347 aa23.51■■□□□ 1.35
CLK4-204ENST00000520126 LMO7Q8WWI1 1683 aa23.49■■□□□ 1.35
CLK4-204ENST00000520126 COL5A2P05997 1499 aaPredicted RBP23.49■■□□□ 1.35
CLK4-204ENST00000520126 CC2D1BQ5T0F9 858 aaKnown RBP23.49■■□□□ 1.35
CLK4-204ENST00000520126 RGS12O14924 1447 aa23.49■■□□□ 1.35
CLK4-204ENST00000520126 SPATA31A1Q5TZJ5 1347 aa23.48■■□□□ 1.35
CLK4-204ENST00000520126 LTN1O94822 1766 aa23.48■■□□□ 1.35
CLK4-204ENST00000520126 SEPT12Q8IYM1 358 aa23.48■■□□□ 1.35
CLK4-204ENST00000520126 ANKRD24Q8TF21 1146 aa23.48■■□□□ 1.35
CLK4-204ENST00000520126 IP6K1Q92551 441 aa23.48■■□□□ 1.35
CLK4-204ENST00000520126 GLI3P10071 1580 aa23.48■■□□□ 1.35
CLK4-204ENST00000520126 NLRP2Q9NX02 1062 aa23.47■■□□□ 1.35
CLK4-204ENST00000520126 HOXC9P31274 260 aa23.46■■□□□ 1.35
CLK4-204ENST00000520126 EMILIN1Q9Y6C2 1016 aa23.46■■□□□ 1.35
CLK4-204ENST00000520126 WDR17Q8IZU2 1322 aa23.45■■□□□ 1.35
CLK4-204ENST00000520126 COL18A1P39060 1754 aa23.45■■□□□ 1.34
CLK4-204ENST00000520126 RGPD5Q99666 1765 aa23.45■■□□□ 1.34
CLK4-204ENST00000520126 TCP11L2Q8N4U5 519 aa23.45■■□□□ 1.34
CLK4-204ENST00000520126 CDK12Q9NYV4 1490 aaPredicted RBP23.44■■□□□ 1.34
CLK4-204ENST00000520126 CRB1P82279 1406 aa23.44■■□□□ 1.34
CLK4-204ENST00000520126 NSD2O96028 1365 aa23.43■■□□□ 1.34
CLK4-204ENST00000520126 PER1O15534 1290 aaPredicted RBP23.43■■□□□ 1.34
CLK4-204ENST00000520126 AMER1Q5JTC6 1135 aaPredicted RBP23.43■■□□□ 1.34
CLK4-204ENST00000520126 SOCS7O14512 581 aa23.42■■□□□ 1.34
CLK4-204ENST00000520126 ERBB3P21860 1342 aa23.41■■□□□ 1.34
CLK4-204ENST00000520126 DDX10Q13206 875 aaKnown RBP23.4■■□□□ 1.34
CLK4-204ENST00000520126 HSP90AB2PQ58FF8 381 aa23.4■■□□□ 1.34
CLK4-204ENST00000520126 BLMP54132 1417 aaPredicted RBP23.39■■□□□ 1.34
CLK4-204ENST00000520126 CARD10Q9BWT7 1032 aa23.39■■□□□ 1.34
CLK4-204ENST00000520126 THRAP3Q9Y2W1 955 aaKnown RBP23.39■■□□□ 1.34
CLK4-204ENST00000520126 ONECUT3O60422 494 aaPredicted RBP23.38■■□□□ 1.33
CLK4-204ENST00000520126 POLKQ9UBT6 870 aa23.38■■□□□ 1.33
CLK4-204ENST00000520126 ABCC6O95255 1503 aa23.38■■□□□ 1.33
CLK4-204ENST00000520126 RTL1A6NKG5 1358 aa23.38■■□□□ 1.33
CLK4-204ENST00000520126 FLT4P35916 1363 aa23.38■■□□□ 1.33
CLK4-204ENST00000520126 BARGINQ6ZT62 677 aa23.37■■□□□ 1.33
CLK4-204ENST00000520126 KRT27Q7Z3Y8 459 aa23.37■■□□□ 1.33
CLK4-204ENST00000520126 ANKRD26Q9UPS8 1709 aa23.37■■□□□ 1.33
CLK4-204ENST00000520126 SMG6Q86US8 1419 aaKnown RBP23.36■■□□□ 1.33
CLK4-204ENST00000520126 PDE3BQ13370 1112 aa23.35■■□□□ 1.33
CLK4-204ENST00000520126 FAM182BQ5T319 152 aa23.35■■□□□ 1.33
CLK4-204ENST00000520126 USHBP1Q8N6Y0 703 aa23.33■■□□□ 1.33
CLK4-204ENST00000520126 MAP2P11137 1827 aaKnown RBP23.33■■□□□ 1.33
CLK4-204ENST00000520126 INSRP06213 1382 aa23.32■■□□□ 1.32
CLK4-204ENST00000520126 PEAK1Q9H792 1746 aa23.31■■□□□ 1.32
CLK4-204ENST00000520126 KIF24Q5T7B8 1368 aa23.31■■□□□ 1.32
CLK4-204ENST00000520126 DDB1Q16531 1140 aa23.31■■□□□ 1.32
CLK4-204ENST00000520126 ZNF316A6NFI3 1004 aaPredicted RBP23.3■■□□□ 1.32
CLK4-204ENST00000520126 NBPF6Q5VWK0 638 aa23.3■■□□□ 1.32
CLK4-204ENST00000520126 NBPF4Q96M43 638 aa23.3■■□□□ 1.32
CLK4-204ENST00000520126 BRWD3Q6RI45 1802 aa23.29■■□□□ 1.32
CLK4-204ENST00000520126 IL2RBP14784 551 aa23.29■■□□□ 1.32
CLK4-204ENST00000520126 CDCA7Q9BWT1 371 aaPredicted RBP23.29■■□□□ 1.32
CLK4-204ENST00000520126 EXOC5O00471 708 aa23.28■■□□□ 1.32
CLK4-204ENST00000520126 MTHFSP49914 203 aa23.28■■□□□ 1.32
CLK4-204ENST00000520126 NPC1L1Q9UHC9 1359 aa23.26■■□□□ 1.31
CLK4-204ENST00000520126 EIF4A2Q14240 407 aaKnown RBP23.26■■□□□ 1.31
CLK4-204ENST00000520126 UPF1Q92900 1129 aaKnown RBP eCLIP23.26■■□□□ 1.31
CLK4-204ENST00000520126 THSD7AQ9UPZ6 1657 aa23.26■■□□□ 1.31
CLK4-204ENST00000520126 RAPGEF4Q8WZA2 1011 aa23.24■■□□□ 1.31
CLK4-204ENST00000520126 RGPD2P0DJD1 1756 aa23.23■■□□□ 1.31
CLK4-204ENST00000520126 EYA1Q99502 592 aa23.22■■□□□ 1.31
CLK4-204ENST00000520126 FAM208AQ9UK61 1670 aaKnown RBP23.21■■□□□ 1.31
CLK4-204ENST00000520126 TATP17735 454 aaPredicted RBP23.21■■□□□ 1.31
CLK4-204ENST00000520126 SF3B2Q13435 895 aaKnown RBP23.21■■□□□ 1.31
CLK4-204ENST00000520126 DDX54Q8TDD1 881 aaKnown RBP23.21■■□□□ 1.31
CLK4-204ENST00000520126 FAM196AQ6ZSG2 479 aa23.2■■□□□ 1.3
CLK4-204ENST00000520126 DISP2A7MBM2 1401 aa23.19■■□□□ 1.3
CLK4-204ENST00000520126 PPP2R1AP30153 589 aa23.18■■□□□ 1.3
CLK4-204ENST00000520126 MARCH10Q8NA82 808 aaPredicted RBP23.18■■□□□ 1.3
CLK4-204ENST00000520126 PARP4Q9UKK3 1724 aaKnown RBP23.18■■□□□ 1.3
CLK4-204ENST00000520126 CFAP53Q96M91 514 aa23.17■■□□□ 1.3
CLK4-204ENST00000520126 LRRC37A3O60309 1634 aa23.17■■□□□ 1.3
CLK4-204ENST00000520126 WNK3Q9BYP7 1800 aa23.17■■□□□ 1.3
CLK4-204ENST00000520126 DIAPH1O60610 1272 aaKnown RBP23.16■■□□□ 1.3
CLK4-204ENST00000520126 TRIM37O94972 964 aa23.16■■□□□ 1.3
CLK4-204ENST00000520126 ZCRB1Q8TBF4 217 aaKnown RBP23.16■■□□□ 1.3
CLK4-204ENST00000520126 MEGF6O75095 1541 aa23.15■■□□□ 1.3
CLK4-204ENST00000520126 U2SURPO15042 1029 aaKnown RBP23.14■■□□□ 1.3
CLK4-204ENST00000520126 IL13P35225 146 aa23.14■■□□□ 1.3
CLK4-204ENST00000520126 TNS2Q63HR2 1409 aa23.13■■□□□ 1.29
CLK4-204ENST00000520126 SULT6B1Q6IMI4 303 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms