RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 IP6K1Q92551 441 aa28.64■■■□□ 2.18
PTP4A3-203ENST00000520105 KIF24Q5T7B8 1368 aa28.64■■■□□ 2.18
PTP4A3-203ENST00000520105 SENP3-EIF4A1A0A087X0R7 540 aa28.63■■■□□ 2.17
PTP4A3-203ENST00000520105 HAP1P54257 671 aaPredicted RBP28.63■■■□□ 2.17
PTP4A3-203ENST00000520105 HNRNPUQ00839 825 aaKnown RBP eCLIP28.62■■■□□ 2.171e-11■■■□□ 18.2
PTP4A3-203ENST00000520105 RTL1A6NKG5 1358 aa28.6■■■□□ 2.17
PTP4A3-203ENST00000520105 CCDC146Q8IYE0 955 aa28.59■■■□□ 2.17
PTP4A3-203ENST00000520105 LTV1Q96GA3 475 aaPredicted RBP28.59■■■□□ 2.17
PTP4A3-203ENST00000520105 AXIN2Q9Y2T1 843 aa28.59■■■□□ 2.17
PTP4A3-203ENST00000520105 KIAA0232Q92628 1395 aa28.59■■■□□ 2.17
PTP4A3-203ENST00000520105 CHRNA2Q15822 529 aa28.59■■■□□ 2.17
PTP4A3-203ENST00000520105 ABCA3Q99758 1704 aa28.57■■■□□ 2.16
PTP4A3-203ENST00000520105 BLMP54132 1417 aaPredicted RBP28.56■■■□□ 2.16
PTP4A3-203ENST00000520105 CPDO75976 1380 aa28.56■■■□□ 2.16
PTP4A3-203ENST00000520105 HMOX1P09601 288 aa28.55■■■□□ 2.16
PTP4A3-203ENST00000520105 PRDM11Q9NQV5 511 aa28.54■■■□□ 2.16
PTP4A3-203ENST00000520105 COL22A1Q8NFW1 1626 aaPredicted RBP28.54■■■□□ 2.16
PTP4A3-203ENST00000520105 RGPD5Q99666 1765 aa28.52■■■□□ 2.16
PTP4A3-203ENST00000520105 HSPA1LP34931 641 aa28.51■■■□□ 2.15
PTP4A3-203ENST00000520105 EYA1Q99502 592 aa28.51■■■□□ 2.15
PTP4A3-203ENST00000520105 COL18A1P39060 1754 aa28.51■■■□□ 2.15
PTP4A3-203ENST00000520105 FCHSD2O94868 740 aa28.5■■■□□ 2.15
PTP4A3-203ENST00000520105 SULT6B1Q6IMI4 303 aa28.49■■■□□ 2.15
PTP4A3-203ENST00000520105 AEBP1Q8IUX7 1158 aa28.49■■■□□ 2.15
PTP4A3-203ENST00000520105 ANKRD24Q8TF21 1146 aa28.49■■■□□ 2.15
PTP4A3-203ENST00000520105 RUNDC1Q96C34 613 aa28.49■■■□□ 2.15
PTP4A3-203ENST00000520105 SALL2Q9Y467 1007 aaPredicted RBP28.49■■■□□ 2.15
PTP4A3-203ENST00000520105 FAM83GA6ND36 823 aa28.49■■■□□ 2.15
PTP4A3-203ENST00000520105 RSPH6AQ9H0K4 717 aa28.49■■■□□ 2.15
PTP4A3-203ENST00000520105 PLEKHF1Q96S99 279 aa28.48■■■□□ 2.15
PTP4A3-203ENST00000520105 RGPD1P0DJD0 1748 aa28.47■■■□□ 2.15
PTP4A3-203ENST00000520105 APAF1O14727 1248 aa28.47■■■□□ 2.15
PTP4A3-203ENST00000520105 NUTM2BA6NNL0 878 aaPredicted RBP28.46■■■□□ 2.15
PTP4A3-203ENST00000520105 NUTM2EB1AL46 878 aaPredicted RBP28.46■■■□□ 2.15
PTP4A3-203ENST00000520105 PRKAR2BP31323 418 aa28.46■■■□□ 2.15
PTP4A3-203ENST00000520105 NUTM2AQ8IVF1 878 aaPredicted RBP28.46■■■□□ 2.15
PTP4A3-203ENST00000520105 NBPF6Q5VWK0 638 aa28.46■■■□□ 2.15
PTP4A3-203ENST00000520105 NBPF4Q96M43 638 aa28.46■■■□□ 2.15
PTP4A3-203ENST00000520105 IGSF1Q8N6C5 1336 aa28.46■■■□□ 2.15
PTP4A3-203ENST00000520105 JCADQ9P266 1359 aa28.46■■■□□ 2.15
PTP4A3-203ENST00000520105 ERBB3P21860 1342 aa28.45■■■□□ 2.15
PTP4A3-203ENST00000520105 ADAMTS2O95450 1211 aa28.44■■■□□ 2.14
PTP4A3-203ENST00000520105 USHBP1Q8N6Y0 703 aa28.44■■■□□ 2.14
PTP4A3-203ENST00000520105 TCP11L2Q8N4U5 519 aa28.43■■■□□ 2.14
PTP4A3-203ENST00000520105 PNNQ9H307 717 aaKnown RBP28.43■■■□□ 2.14
PTP4A3-203ENST00000520105 RGPD2P0DJD1 1756 aa28.43■■■□□ 2.14
PTP4A3-203ENST00000520105 CAMTA1Q9Y6Y1 1673 aa28.42■■■□□ 2.14
PTP4A3-203ENST00000520105 ABCC6O95255 1503 aa28.41■■■□□ 2.14
PTP4A3-203ENST00000520105 PHACTR3Q96KR7 559 aa28.41■■■□□ 2.14
PTP4A3-203ENST00000520105 RRP7AQ9Y3A4 280 aaKnown RBP28.4■■■□□ 2.14
PTP4A3-203ENST00000520105 LMO7Q8WWI1 1683 aa28.4■■■□□ 2.14
PTP4A3-203ENST00000520105 ZBED9Q6R2W3 1325 aa28.4■■■□□ 2.14
PTP4A3-203ENST00000520105 MAPK8IP3Q9UPT6 1336 aa28.4■■■□□ 2.14
PTP4A3-203ENST00000520105 CSB-PGBD3P0DP91 1061 aa28.4■■■□□ 2.14
PTP4A3-203ENST00000520105 NEUROD2Q15784 382 aa28.39■■■□□ 2.14
PTP4A3-203ENST00000520105 KDRP35968 1356 aa28.39■■■□□ 2.13
PTP4A3-203ENST00000520105 NLRP2Q9NX02 1062 aa28.38■■■□□ 2.13
PTP4A3-203ENST00000520105 BTG4Q9NY30 223 aa28.37■■■□□ 2.13
PTP4A3-203ENST00000520105 NEFMP07197 916 aa28.36■■■□□ 2.13
PTP4A3-203ENST00000520105 STRN4Q9NRL3 753 aa28.36■■■□□ 2.13
PTP4A3-203ENST00000520105 COL5A2P05997 1499 aaPredicted RBP28.34■■■□□ 2.13
PTP4A3-203ENST00000520105 EVA1CP58658 441 aa28.34■■■□□ 2.13
PTP4A3-203ENST00000520105 TMPOP42166 694 aaKnown RBP28.34■■■□□ 2.13
PTP4A3-203ENST00000520105 COL14A1Q05707 1796 aaKnown RBP28.33■■■□□ 2.13
PTP4A3-203ENST00000520105 SPATA31A6Q5VVP1 1343 aa28.32■■■□□ 2.12
PTP4A3-203ENST00000520105 WDR17Q8IZU2 1322 aa28.32■■■□□ 2.12
PTP4A3-203ENST00000520105 LARP1Q6PKG0 1096 aaKnown RBP28.3■■■□□ 2.12
PTP4A3-203ENST00000520105 TOM1L2Q6ZVM7 507 aa28.29■■■□□ 2.12
PTP4A3-203ENST00000520105 NCAPD2Q15021 1401 aa28.29■■■□□ 2.12
PTP4A3-203ENST00000520105 RIPK4P57078 832 aa28.29■■■□□ 2.12
PTP4A3-203ENST00000520105 CENPBP07199 599 aaPredicted RBP28.28■■■□□ 2.12
PTP4A3-203ENST00000520105 NFE2L2Q16236 605 aa28.28■■■□□ 2.12
PTP4A3-203ENST00000520105 NGEFQ8N5V2 710 aa28.27■■■□□ 2.12
PTP4A3-203ENST00000520105 FAM208AQ9UK61 1670 aaKnown RBP28.26■■■□□ 2.11
PTP4A3-203ENST00000520105 LRP6O75581 1613 aa28.26■■■□□ 2.11
PTP4A3-203ENST00000520105 WWC1Q8IX03 1113 aa28.26■■■□□ 2.11
PTP4A3-203ENST00000520105 ZNF521Q96K83 1311 aa28.25■■■□□ 2.11
PTP4A3-203ENST00000520105 MTHFSDQ2M296 383 aaKnown RBP28.25■■■□□ 2.11
PTP4A3-203ENST00000520105 C8orf37Q96NL8 207 aa28.25■■■□□ 2.11
PTP4A3-203ENST00000520105 PLCH1Q4KWH8 1693 aa28.24■■■□□ 2.11
PTP4A3-203ENST00000520105 TRIM35Q9UPQ4 493 aa28.24■■■□□ 2.11
PTP4A3-203ENST00000520105 NGLY1Q96IV0 654 aa28.23■■■□□ 2.11
PTP4A3-203ENST00000520105 PHF23Q9BUL5 403 aaPredicted RBP28.23■■■□□ 2.11
PTP4A3-203ENST00000520105 CARD10Q9BWT7 1032 aa28.23■■■□□ 2.11
PTP4A3-203ENST00000520105 CCDC27Q2M243 656 aa28.23■■■□□ 2.11
PTP4A3-203ENST00000520105 NCBP3Q53F19 620 aaKnown RBP28.22■■■□□ 2.11
PTP4A3-203ENST00000520105 CDCA7LQ96GN5 454 aa28.22■■■□□ 2.11
PTP4A3-203ENST00000520105 USP35Q9P2H5 1018 aa28.22■■■□□ 2.11
PTP4A3-203ENST00000520105 RAPGEF4Q8WZA2 1011 aa28.21■■■□□ 2.11
PTP4A3-203ENST00000520105 DLG5Q8TDM6 1919 aa28.2■■■□□ 2.11
PTP4A3-203ENST00000520105 CRB1P82279 1406 aa28.2■■■□□ 2.1
PTP4A3-203ENST00000520105 SLIT2O94813 1529 aa28.2■■■□□ 2.1
PTP4A3-203ENST00000520105 GAS2L2Q8NHY3 880 aa28.19■■■□□ 2.1
PTP4A3-203ENST00000520105 FBXO41Q8TF61 875 aa28.19■■■□□ 2.1
PTP4A3-203ENST00000520105 MEX3CQ5U5Q3 659 aaKnown RBP28.18■■■□□ 2.1
PTP4A3-203ENST00000520105 TATP17735 454 aaPredicted RBP28.17■■■□□ 2.1
PTP4A3-203ENST00000520105 GOLGA2Q08379 1002 aa28.17■■■□□ 2.1
PTP4A3-203ENST00000520105 PLEKHO1Q53GL0 409 aaPredicted RBP28.17■■■□□ 2.1
PTP4A3-203ENST00000520105 MEGF6O75095 1541 aa28.17■■■□□ 2.1
PTP4A3-203ENST00000520105 PDE3BQ13370 1112 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms