RNA–Protein interactions for RNA: ENST00000519802.5

PCM1-213, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-213ENST00000519802 TTLL8A6PVC2 850 aa10.1□□□□□ -0.79
PCM1-213ENST00000519802 CTDSPL2Q05D32 466 aa10.1□□□□□ -0.79
PCM1-213ENST00000519802 PPP1R26Q5T8A7 1209 aaPredicted RBP10.1□□□□□ -0.79
PCM1-213ENST00000519802 KRT76Q01546 638 aa10.09□□□□□ -0.79
PCM1-213ENST00000519802 PTSQ03393 145 aa10.09□□□□□ -0.79
PCM1-213ENST00000519802 Q6ZVU0 165 aa10.09□□□□□ -0.79
PCM1-213ENST00000519802 GPR161Q8N6U8 529 aaKnown RBP10.09□□□□□ -0.79
PCM1-213ENST00000519802 PGPEP1Q9NXJ5 209 aa10.09□□□□□ -0.79
PCM1-213ENST00000519802 CBLBQ13191 982 aa10.08□□□□□ -0.8
PCM1-213ENST00000519802 PDXDC2PQ6P474 469 aa10.08□□□□□ -0.8
PCM1-213ENST00000519802 SPINT1O43278 529 aa10.07□□□□□ -0.8
PCM1-213ENST00000519802 ARHGAP9Q9BRR9 750 aa10.07□□□□□ -0.8
PCM1-213ENST00000519802 FIGNL2A6NMB9 653 aa10.06□□□□□ -0.8
PCM1-213ENST00000519802 KCNMA1Q12791 1236 aa10.06□□□□□ -0.8
PCM1-213ENST00000519802 KCTD15Q96SI1 283 aaPredicted RBP10.06□□□□□ -0.8
PCM1-213ENST00000519802 FKBPLQ9UIM3 349 aa10.06□□□□□ -0.8
PCM1-213ENST00000519802 GSK3AP49840 483 aa10.05□□□□□ -0.8
PCM1-213ENST00000519802 LRRN4Q8WUT4 740 aa10.05□□□□□ -0.8
PCM1-213ENST00000519802 CNTNAP3BQ96NU0 1288 aa10.05□□□□□ -0.8
PCM1-213ENST00000519802 CNTNAP3Q9BZ76 1288 aa10.05□□□□□ -0.8
PCM1-213ENST00000519802 CDV3Q9UKY7 258 aaKnown RBP10.05□□□□□ -0.8
PCM1-213ENST00000519802 CCDC155Q8N6L0 562 aa10.04□□□□□ -0.8
PCM1-213ENST00000519802 NANOS1Q8WY41 292 aaKnown RBP10.04□□□□□ -0.8
PCM1-213ENST00000519802 SLC10A4Q96EP9 437 aa10.04□□□□□ -0.8
PCM1-213ENST00000519802 DHX9Q08211 1270 aaKnown RBP10.03□□□□□ -0.8
PCM1-213ENST00000519802 ZC3H4Q9UPT8 1303 aaKnown RBP10.03□□□□□ -0.8
PCM1-213ENST00000519802 FBXO31Q5XUX0 539 aaPredicted RBP10.02□□□□□ -0.81
PCM1-213ENST00000519802 ZBTB33Q86T24 672 aa10.02□□□□□ -0.81
PCM1-213ENST00000519802 COL25A1Q9BXS0 654 aaPredicted RBP10.02□□□□□ -0.81
PCM1-213ENST00000519802 NR6A1Q15406 480 aa10.01□□□□□ -0.81
PCM1-213ENST00000519802 INTS6LQ5JSJ4 861 aaKnown RBP10.01□□□□□ -0.81
PCM1-213ENST00000519802 OCSTAMPQ9BR26 566 aa10.01□□□□□ -0.81
PCM1-213ENST00000519802 LOC100996750A0A140TA64 210 aa10□□□□□ -0.81
PCM1-213ENST00000519802 SLC35F4A4IF30 521 aa10□□□□□ -0.81
PCM1-213ENST00000519802 AGBL1Q96MI9 1066 aa10□□□□□ -0.81
PCM1-213ENST00000519802 KRTAP4-6Q9BYQ5 205 aa10□□□□□ -0.81
PCM1-213ENST00000519802 CTSOP43234 321 aaPredicted RBP9.99□□□□□ -0.81
PCM1-213ENST00000519802 PTK2Q05397 1052 aa9.99□□□□□ -0.81
PCM1-213ENST00000519802 SKIV2LQ15477 1246 aaKnown RBP9.99□□□□□ -0.81
PCM1-213ENST00000519802 NEUROD2Q15784 382 aa9.99□□□□□ -0.81
PCM1-213ENST00000519802 RNFT1Q5M7Z0 435 aa9.99□□□□□ -0.81
PCM1-213ENST00000519802 KCTD17Q8N5Z5 321 aa9.99□□□□□ -0.81
PCM1-213ENST00000519802 RELBQ01201 579 aa9.98□□□□□ -0.81
PCM1-213ENST00000519802 ADAMTS8Q9UP79 889 aa9.98□□□□□ -0.81
PCM1-213ENST00000519802 GPSM3Q9Y4H4 160 aa9.98□□□□□ -0.81
PCM1-213ENST00000519802 ITGA6P23229 1130 aa9.97□□□□□ -0.81
PCM1-213ENST00000519802 SH3D19Q5HYK7 790 aa9.97□□□□□ -0.81
PCM1-213ENST00000519802 PPP2R2DQ66LE6 453 aa9.97□□□□□ -0.81
PCM1-213ENST00000519802 INSM2Q96T92 566 aaPredicted RBP9.97□□□□□ -0.81
PCM1-213ENST00000519802 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.97□□□□□ -0.81
PCM1-213ENST00000519802 BRPF1P55201 1214 aaPredicted RBP9.96□□□□□ -0.82
PCM1-213ENST00000519802 ZNF385CQ66K41 422 aaPredicted RBP9.96□□□□□ -0.82
PCM1-213ENST00000519802 TMEM151AQ8N4L1 468 aa9.96□□□□□ -0.82
PCM1-213ENST00000519802 PROCA1Q8NCQ7 364 aaPredicted RBP9.96□□□□□ -0.82
PCM1-213ENST00000519802 ADAM32Q8TC27 787 aa9.96□□□□□ -0.82
PCM1-213ENST00000519802 RASSF7Q02833 373 aa9.95□□□□□ -0.82
PCM1-213ENST00000519802 VWA5B2Q8N398 1253 aa9.95□□□□□ -0.82
PCM1-213ENST00000519802 SLURP2P0DP57 97 aa9.94□□□□□ -0.82
PCM1-213ENST00000519802 SV2AQ7L0J3 742 aa9.94□□□□□ -0.82
PCM1-213ENST00000519802 RNF217Q8TC41 542 aa9.94□□□□□ -0.82
PCM1-213ENST00000519802 POLMQ9NP87 494 aaPredicted RBP9.94□□□□□ -0.82
PCM1-213ENST00000519802 TMPRSS4Q9NRS4 437 aa9.94□□□□□ -0.82
PCM1-213ENST00000519802 RNF225M0QZC1 329 aaPredicted RBP9.93□□□□□ -0.82
PCM1-213ENST00000519802 AP1G2O75843 785 aa9.93□□□□□ -0.82
PCM1-213ENST00000519802 GDF11O95390 407 aa9.93□□□□□ -0.82
PCM1-213ENST00000519802 SUZ12Q15022 739 aaKnown RBP9.93□□□□□ -0.82
PCM1-213ENST00000519802 NBPF20Q3BBV1 942 aa9.93□□□□□ -0.82
PCM1-213ENST00000519802 ZNF395Q9H8N7 513 aaPredicted RBP9.93□□□□□ -0.82
PCM1-213ENST00000519802 CDC14CA4D256 554 aa9.92□□□□□ -0.82
PCM1-213ENST00000519802 SVOPQ8N4V2 548 aa9.92□□□□□ -0.82
PCM1-213ENST00000519802 ZNF784Q8NCA9 323 aaPredicted RBP9.92□□□□□ -0.82
PCM1-213ENST00000519802 EPS8L1Q8TE68 723 aa9.92□□□□□ -0.82
PCM1-213ENST00000519802 WHAMMQ8TF30 809 aa9.92□□□□□ -0.82
PCM1-213ENST00000519802 SENP3-EIF4A1A0A087X0R7 540 aa9.91□□□□□ -0.82
PCM1-213ENST00000519802 ADH1AP07327 375 aa9.91□□□□□ -0.82
PCM1-213ENST00000519802 LILRA1O75019 489 aa9.9□□□□□ -0.82
PCM1-213ENST00000519802 ARHGEF15O94989 841 aa9.9□□□□□ -0.82
PCM1-213ENST00000519802 ADD1P35611 737 aaKnown RBP9.9□□□□□ -0.82
PCM1-213ENST00000519802 FAM117AQ9C073 453 aa9.9□□□□□ -0.82
PCM1-213ENST00000519802 KDM4CQ9H3R0 1056 aa9.9□□□□□ -0.82
PCM1-213ENST00000519802 HMX1Q9NP08 348 aaPredicted RBP9.9□□□□□ -0.82
PCM1-213ENST00000519802 ERVH48-1M5A8F1 160 aa9.89□□□□□ -0.83
PCM1-213ENST00000519802 RAB15P59190 212 aa9.89□□□□□ -0.83
PCM1-213ENST00000519802 FOXD4L5Q5VV16 416 aaPredicted RBP9.89□□□□□ -0.83
PCM1-213ENST00000519802 KDF1Q8NAX2 398 aaPredicted RBP9.89□□□□□ -0.83
PCM1-213ENST00000519802 PNMA1Q8ND90 353 aa9.89□□□□□ -0.83
PCM1-213ENST00000519802 DDRGK1Q96HY6 314 aa9.89□□□□□ -0.83
PCM1-213ENST00000519802 GPBP1L1Q9HC44 474 aaPredicted RBP9.89□□□□□ -0.83
PCM1-213ENST00000519802 ATP1B4Q9UN42 357 aaPredicted RBP9.89□□□□□ -0.83
PCM1-213ENST00000519802 ESPNB1AK53 854 aa9.88□□□□□ -0.83
PCM1-213ENST00000519802 PTGIRP43119 386 aa9.88□□□□□ -0.83
PCM1-213ENST00000519802 DZIP3Q86Y13 1208 aaKnown RBP9.88□□□□□ -0.83
PCM1-213ENST00000519802 USP17L8P0C7I0 530 aa9.87□□□□□ -0.83
PCM1-213ENST00000519802 ADAMTS2O95450 1211 aa9.84□□□□□ -0.83
PCM1-213ENST00000519802 LYSMD3Q7Z3D4 306 aa9.84□□□□□ -0.83
PCM1-213ENST00000519802 CUEDC1Q9NWM3 386 aaPredicted RBP9.84□□□□□ -0.83
PCM1-213ENST00000519802 IRS1P35568 1242 aa9.83□□□□□ -0.84
PCM1-213ENST00000519802 TMEM132AQ24JP5 1023 aa9.83□□□□□ -0.84
PCM1-213ENST00000519802 MARSP56192 900 aaKnown RBP9.82□□□□□ -0.84
PCM1-213ENST00000519802 SRSF11Q05519 484 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms