RNA–Protein interactions for RNA: ENST00000519686.6

VNN3-212, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-212ENST00000519686 CPDO75976 1380 aa12.91□□□□□ -0.34
VNN3-212ENST00000519686 SSH2Q76I76 1423 aa12.9□□□□□ -0.34
VNN3-212ENST00000519686 RGPD1P0DJD0 1748 aa12.9□□□□□ -0.34
VNN3-212ENST00000519686 NLRP6P59044 892 aa12.9□□□□□ -0.34
VNN3-212ENST00000519686 CAMTA1Q9Y6Y1 1673 aa12.88□□□□□ -0.35
VNN3-212ENST00000519686 TONSLQ96HA7 1378 aa12.88□□□□□ -0.35
VNN3-212ENST00000519686 PDE3BQ13370 1112 aa12.88□□□□□ -0.35
VNN3-212ENST00000519686 LARP1Q6PKG0 1096 aaKnown RBP12.88□□□□□ -0.35
VNN3-212ENST00000519686 LMO7Q8WWI1 1683 aa12.87□□□□□ -0.35
VNN3-212ENST00000519686 CHRDL2Q6WN34 429 aa12.87□□□□□ -0.35
VNN3-212ENST00000519686 FAM196AQ6ZSG2 479 aa12.87□□□□□ -0.35
VNN3-212ENST00000519686 BARGINQ6ZT62 677 aa12.87□□□□□ -0.35
VNN3-212ENST00000519686 TCP11L2Q8N4U5 519 aa12.87□□□□□ -0.35
VNN3-212ENST00000519686 CARD11Q9BXL7 1154 aa12.87□□□□□ -0.35
VNN3-212ENST00000519686 PIK3C2AO00443 1686 aa12.86□□□□□ -0.35
VNN3-212ENST00000519686 EN1Q05925 392 aaPredicted RBP12.85□□□□□ -0.35
VNN3-212ENST00000519686 THRAP3Q9Y2W1 955 aaKnown RBP12.85□□□□□ -0.35
VNN3-212ENST00000519686 COL5A2P05997 1499 aaPredicted RBP12.85□□□□□ -0.35
VNN3-212ENST00000519686 AKAP12Q02952 1782 aa12.85□□□□□ -0.35
VNN3-212ENST00000519686 SLIT3O75094 1523 aa12.85□□□□□ -0.35
VNN3-212ENST00000519686 TRIM37O94972 964 aa12.84□□□□□ -0.35
VNN3-212ENST00000519686 AATKQ6ZMQ8 1374 aa12.84□□□□□ -0.35
VNN3-212ENST00000519686 KTN1Q86UP2 1357 aaKnown RBP12.84□□□□□ -0.35
VNN3-212ENST00000519686 TNS1Q9HBL0 1735 aaKnown RBP12.84□□□□□ -0.35
VNN3-212ENST00000519686 CRB1P82279 1406 aa12.83□□□□□ -0.35
VNN3-212ENST00000519686 SOX12O15370 315 aa12.83□□□□□ -0.36
VNN3-212ENST00000519686 KCNH5Q8NCM2 988 aa12.83□□□□□ -0.36
VNN3-212ENST00000519686 TTC21BQ7Z4L5 1316 aa12.83□□□□□ -0.36
VNN3-212ENST00000519686 TTC21AQ8NDW8 1320 aa12.83□□□□□ -0.36
VNN3-212ENST00000519686 TOM1L2Q6ZVM7 507 aa12.82□□□□□ -0.36
VNN3-212ENST00000519686 SBNO2Q9Y2G9 1366 aa12.82□□□□□ -0.36
VNN3-212ENST00000519686 DISP2A7MBM2 1401 aa12.82□□□□□ -0.36
VNN3-212ENST00000519686 PSDA5PKW4 1024 aaPredicted RBP12.81□□□□□ -0.36
VNN3-212ENST00000519686 APBA3O96018 575 aa12.81□□□□□ -0.36
VNN3-212ENST00000519686 TMC1Q8TDI8 760 aa12.81□□□□□ -0.36
VNN3-212ENST00000519686 SRCAPQ6ZRS2 3230 aa12.81□□□□□ -0.36
VNN3-212ENST00000519686 CPSF1Q10570 1443 aaKnown RBP12.81□□□□□ -0.36
VNN3-212ENST00000519686 PARP4Q9UKK3 1724 aaKnown RBP12.81□□□□□ -0.36
VNN3-212ENST00000519686 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.81□□□□□ -0.36
VNN3-212ENST00000519686 C11orf95C9JLR9 678 aaPredicted RBP12.8□□□□□ -0.36
VNN3-212ENST00000519686 CSB-PGBD3P0DP91 1061 aa12.8□□□□□ -0.36
VNN3-212ENST00000519686 TRIM26Q12899 539 aaPredicted RBP12.8□□□□□ -0.36
VNN3-212ENST00000519686 EZH2Q15910 746 aaKnown RBP12.8□□□□□ -0.36
VNN3-212ENST00000519686 HDGFL2Q7Z4V5 671 aaPredicted RBP12.8□□□□□ -0.36
VNN3-212ENST00000519686 MON2Q7Z3U7 1717 aa12.8□□□□□ -0.36
VNN3-212ENST00000519686 PRR29P0C7W0 189 aa12.79□□□□□ -0.36
VNN3-212ENST00000519686 ARHGEF25Q86VW2 580 aa12.79□□□□□ -0.36
VNN3-212ENST00000519686 FBXO3Q9UK99 471 aa12.79□□□□□ -0.36
VNN3-212ENST00000519686 WDR17Q8IZU2 1322 aa12.79□□□□□ -0.36
VNN3-212ENST00000519686 COL18A1P39060 1754 aa12.78□□□□□ -0.36
VNN3-212ENST00000519686 R3HDM1Q15032 1099 aaKnown RBP12.78□□□□□ -0.36
VNN3-212ENST00000519686 DDB1Q16531 1140 aa12.78□□□□□ -0.36
VNN3-212ENST00000519686 TERF2IPQ9NYB0 399 aa12.78□□□□□ -0.36
VNN3-212ENST00000519686 AXIN2Q9Y2T1 843 aa12.78□□□□□ -0.36
VNN3-212ENST00000519686 PARD3Q8TEW0 1356 aa12.78□□□□□ -0.36
VNN3-212ENST00000519686 LRP5O75197 1615 aa12.78□□□□□ -0.36
VNN3-212ENST00000519686 RGPD5Q99666 1765 aa12.78□□□□□ -0.36
VNN3-212ENST00000519686 OVOS2A0A0G2JMS6 1433 aa12.77□□□□□ -0.37
VNN3-212ENST00000519686 OVOS2A0A0J9YW53 1432 aa12.77□□□□□ -0.37
VNN3-212ENST00000519686 LRRC37A3O60309 1634 aa12.77□□□□□ -0.37
VNN3-212ENST00000519686 OVOS2Q6IE36 1432 aa12.77□□□□□ -0.37
VNN3-212ENST00000519686 CAMKK2Q96RR4 588 aa12.77□□□□□ -0.37
VNN3-212ENST00000519686 CDCA7Q9BWT1 371 aaPredicted RBP12.76□□□□□ -0.37
VNN3-212ENST00000519686 WNK3Q9BYP7 1800 aa12.76□□□□□ -0.37
VNN3-212ENST00000519686 NFAT5O94916 1531 aa12.75□□□□□ -0.37
VNN3-212ENST00000519686 NBPF14Q5TI25 921 aa12.75□□□□□ -0.37
VNN3-212ENST00000519686 NME9Q86XW9 330 aa12.75□□□□□ -0.37
VNN3-212ENST00000519686 SLC12A5Q9H2X9 1139 aa12.75□□□□□ -0.37
VNN3-212ENST00000519686 ABCC6O95255 1503 aa12.75□□□□□ -0.37
VNN3-212ENST00000519686 EDC4Q6P2E9 1401 aaKnown RBP12.74□□□□□ -0.37
VNN3-212ENST00000519686 SLC24A1O60721 1099 aa12.74□□□□□ -0.37
VNN3-212ENST00000519686 CARD10Q9BWT7 1032 aa12.74□□□□□ -0.37
VNN3-212ENST00000519686 CD163L1Q9NR16 1453 aa12.74□□□□□ -0.37
VNN3-212ENST00000519686 USP31Q70CQ4 1352 aa12.73□□□□□ -0.37
VNN3-212ENST00000519686 USP54Q70EL1 1684 aa12.73□□□□□ -0.37
VNN3-212ENST00000519686 RREB1Q92766 1687 aa12.73□□□□□ -0.37
VNN3-212ENST00000519686 PUS7Q96PZ0 661 aaKnown RBP12.73□□□□□ -0.37
VNN3-212ENST00000519686 LTN1O94822 1766 aa12.73□□□□□ -0.37
VNN3-212ENST00000519686 A0A1W2PP64 1363 aa12.73□□□□□ -0.37
VNN3-212ENST00000519686 CCDC7Q96M83 1385 aa12.73□□□□□ -0.37
VNN3-212ENST00000519686 NINLQ9Y2I6 1382 aa12.73□□□□□ -0.37
VNN3-212ENST00000519686 ST20-MTHFSA0A0A6YYL1 179 aa12.72□□□□□ -0.37
VNN3-212ENST00000519686 FXR2P51116 673 aaKnown RBP eCLIP12.72□□□□□ -0.37
VNN3-212ENST00000519686 NUP188Q5SRE5 1749 aa12.72□□□□□ -0.37
VNN3-212ENST00000519686 PEAK1Q9H792 1746 aa12.72□□□□□ -0.37
VNN3-212ENST00000519686 EXOC5O00471 708 aa12.71□□□□□ -0.37
VNN3-212ENST00000519686 NLRP2Q9NX02 1062 aa12.71□□□□□ -0.37
VNN3-212ENST00000519686 SBF2Q86WG5 1849 aa12.7□□□□□ -0.38
VNN3-212ENST00000519686 PIP4P2Q8N4L2 257 aa12.7□□□□□ -0.38
VNN3-212ENST00000519686 BCL11BQ9C0K0 894 aaPredicted RBP12.7□□□□□ -0.38
VNN3-212ENST00000519686 ERBB3P21860 1342 aa12.7□□□□□ -0.38
VNN3-212ENST00000519686 MARCH10Q8NA82 808 aaPredicted RBP12.69□□□□□ -0.38
VNN3-212ENST00000519686 TESK2Q96S53 571 aa12.69□□□□□ -0.38
VNN3-212ENST00000519686 RGPD3A6NKT7 1758 aaPredicted RBP12.69□□□□□ -0.38
VNN3-212ENST00000519686 RGPD4Q7Z3J3 1758 aa12.69□□□□□ -0.38
VNN3-212ENST00000519686 TMF1P82094 1093 aa12.69□□□□□ -0.38
VNN3-212ENST00000519686 CHADLQ6NUI6 762 aa12.69□□□□□ -0.38
VNN3-212ENST00000519686 ANKRD24Q8TF21 1146 aa12.69□□□□□ -0.38
VNN3-212ENST00000519686 TNS2Q63HR2 1409 aa12.68□□□□□ -0.38
VNN3-212ENST00000519686 PLSCR1O15162 318 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms