RNA–Protein interactions for RNA: ENST00000519560.5

SLIT3-206, Transcript of slit guidance ligand 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLIT3, Length 9,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-206ENST00000519560 GOLGA6L10A0A0M3HER8 536 aa16.23■□□□□ 0.19
SLIT3-206ENST00000519560 TRIM21P19474 475 aaKnown RBP16.23■□□□□ 0.19
SLIT3-206ENST00000519560 GNL3LQ9NVN8 582 aaKnown RBP16.23■□□□□ 0.19
SLIT3-206ENST00000519560 WDR33Q9C0J8 1336 aaKnown RBP16.23■□□□□ 0.19
SLIT3-206ENST00000519560 NF2P35240 595 aa16.22■□□□□ 0.19
SLIT3-206ENST00000519560 KIAA1328Q86T90 577 aa16.22■□□□□ 0.19
SLIT3-206ENST00000519560 SHTN1A0MZ66 631 aa16.22■□□□□ 0.19
SLIT3-206ENST00000519560 PLEKHH2Q8IVE3 1493 aa16.22■□□□□ 0.19
SLIT3-206ENST00000519560 KIF6Q6ZMV9 814 aa16.22■□□□□ 0.19
SLIT3-206ENST00000519560 GAPVD1Q14C86 1478 aa16.22■□□□□ 0.19
SLIT3-206ENST00000519560 CYP46A1Q9Y6A2 500 aa16.22■□□□□ 0.19
SLIT3-206ENST00000519560 KRT85P78386 507 aa16.22■□□□□ 0.19
SLIT3-206ENST00000519560 SMG6Q86US8 1419 aaKnown RBP16.21■□□□□ 0.19
SLIT3-206ENST00000519560 MAP9Q49MG5 647 aa16.21■□□□□ 0.19
SLIT3-206ENST00000519560 GNAI3P08754 354 aa16.21■□□□□ 0.19
SLIT3-206ENST00000519560 NEBLO76041 1014 aa16.21■□□□□ 0.19
SLIT3-206ENST00000519560 TMCO3Q6UWJ1 677 aa16.21■□□□□ 0.19
SLIT3-206ENST00000519560 DDX11Q96FC9 970 aa16.21■□□□□ 0.19
SLIT3-206ENST00000519560 CDKL5O76039 1030 aa16.21■□□□□ 0.19
SLIT3-206ENST00000519560 CCDC148Q8NFR7 591 aa16.21■□□□□ 0.19
SLIT3-206ENST00000519560 STAMBPO95630 424 aa16.21■□□□□ 0.19
SLIT3-206ENST00000519560 CCDC97Q96F63 343 aaPredicted RBP16.21■□□□□ 0.19
SLIT3-206ENST00000519560 CEP57L1Q8IYX8 460 aa16.21■□□□□ 0.18
SLIT3-206ENST00000519560 TDRD9Q8NDG6 1382 aaKnown RBP16.2■□□□□ 0.18
SLIT3-206ENST00000519560 RAPGEF4Q8WZA2 1011 aa16.2■□□□□ 0.18
SLIT3-206ENST00000519560 ZHX3Q9H4I2 956 aa16.2■□□□□ 0.18
SLIT3-206ENST00000519560 CRACR2AQ9BSW2 395 aa16.2■□□□□ 0.18
SLIT3-206ENST00000519560 CEP63Q96MT8 703 aa16.2■□□□□ 0.18
SLIT3-206ENST00000519560 PODXL2Q9NZ53 605 aa16.2■□□□□ 0.18
SLIT3-206ENST00000519560 NCOA2Q15596 1464 aa16.2■□□□□ 0.18
SLIT3-206ENST00000519560 HFM1A2PYH4 1435 aa16.2■□□□□ 0.18
SLIT3-206ENST00000519560 KLHL34Q8N239 644 aa16.2■□□□□ 0.18
SLIT3-206ENST00000519560 EPB41L2O43491 1005 aaKnown RBP16.19■□□□□ 0.18
SLIT3-206ENST00000519560 MAP2K1Q02750 393 aaPredicted RBP16.19■□□□□ 0.18
SLIT3-206ENST00000519560 SYNJ1O43426 1573 aa16.19■□□□□ 0.18
SLIT3-206ENST00000519560 ZNF397Q8NF99 534 aaPredicted RBP16.19■□□□□ 0.18
SLIT3-206ENST00000519560 TAF4BQ92750 862 aa16.19■□□□□ 0.18
SLIT3-206ENST00000519560 TTC39AQ5SRH9 613 aa16.19■□□□□ 0.18
SLIT3-206ENST00000519560 CCDC69A6NI79 296 aa16.19■□□□□ 0.18
SLIT3-206ENST00000519560 ARHGAP29Q52LW3 1261 aa16.19■□□□□ 0.18
SLIT3-206ENST00000519560 GRPEL1Q9HAV7 217 aa16.19■□□□□ 0.18
SLIT3-206ENST00000519560 MCM3P25205 808 aa16.19■□□□□ 0.18
SLIT3-206ENST00000519560 CCDC30Q5VVM6 783 aa16.19■□□□□ 0.18
SLIT3-206ENST00000519560 CUL7Q14999 1698 aa16.19■□□□□ 0.18
SLIT3-206ENST00000519560 HMOX1P09601 288 aa16.19■□□□□ 0.18
SLIT3-206ENST00000519560 NACAP1Q9BZK3 213 aa16.19■□□□□ 0.18
SLIT3-206ENST00000519560 CFAP45Q9UL16 551 aa16.18■□□□□ 0.18
SLIT3-206ENST00000519560 KIF2AO00139 706 aaPredicted RBP16.18■□□□□ 0.18
SLIT3-206ENST00000519560 PDCL2Q8N4E4 241 aa16.18■□□□□ 0.18
SLIT3-206ENST00000519560 NOL7Q9UMY1 257 aaKnown RBP16.17■□□□□ 0.18
SLIT3-206ENST00000519560 GBP3Q9H0R5 595 aa16.17■□□□□ 0.18
SLIT3-206ENST00000519560 ATP2B2Q01814 1243 aa16.17■□□□□ 0.18
SLIT3-206ENST00000519560 POTEJP0CG39 1038 aa16.17■□□□□ 0.18
SLIT3-206ENST00000519560 HMGXB3Q12766 1538 aa16.16■□□□□ 0.18
SLIT3-206ENST00000519560 SURF6O75683 361 aaKnown RBP16.16■□□□□ 0.18
SLIT3-206ENST00000519560 BMP2KQ9NSY1 1161 aaPredicted RBP16.16■□□□□ 0.18
SLIT3-206ENST00000519560 MATR3P43243 847 aaKnown RBP eCLIP16.16■□□□□ 0.18
SLIT3-206ENST00000519560 SPATA32Q96LK8 384 aa16.16■□□□□ 0.18
SLIT3-206ENST00000519560 PPP1R12BO60237 982 aaPredicted RBP16.16■□□□□ 0.18
SLIT3-206ENST00000519560 ANAPC15P60006 121 aa16.16■□□□□ 0.18
SLIT3-206ENST00000519560 PPM1EQ8WY54 764 aa16.16■□□□□ 0.18
SLIT3-206ENST00000519560 MAPK8IP2Q13387 824 aaPredicted RBP16.16■□□□□ 0.18
SLIT3-206ENST00000519560 CCDC158Q5M9N0 1113 aa16.16■□□□□ 0.18
SLIT3-206ENST00000519560 UBXN4Q92575 508 aa16.16■□□□□ 0.18
SLIT3-206ENST00000519560 SMTNL1A8MU46 457 aa16.15■□□□□ 0.18
SLIT3-206ENST00000519560 SSR1P43307 286 aaKnown RBP16.15■□□□□ 0.18
SLIT3-206ENST00000519560 IMMTQ16891 758 aaKnown RBP16.15■□□□□ 0.18
SLIT3-206ENST00000519560 SPATA24Q86W54 205 aa16.15■□□□□ 0.18
SLIT3-206ENST00000519560 FEZ1Q99689 392 aa16.15■□□□□ 0.18
SLIT3-206ENST00000519560 UPF3BQ9BZI7 483 aaKnown RBP16.15■□□□□ 0.18
SLIT3-206ENST00000519560 CETN2P41208 172 aa16.15■□□□□ 0.18
SLIT3-206ENST00000519560 CCDC57Q2TAC2 916 aa16.15■□□□□ 0.18
SLIT3-206ENST00000519560 FAM107BQ9H098 131 aa16.15■□□□□ 0.18
SLIT3-206ENST00000519560 GNAI2P04899 355 aa16.14■□□□□ 0.17
SLIT3-206ENST00000519560 EIF5P55010 431 aaKnown RBP16.14■□□□□ 0.17
SLIT3-206ENST00000519560 STK3Q13188 491 aa16.14■□□□□ 0.17
SLIT3-206ENST00000519560 GCC1Q96CN9 775 aa16.14■□□□□ 0.17
SLIT3-206ENST00000519560 DNAI2Q9GZS0 605 aa16.14■□□□□ 0.17
SLIT3-206ENST00000519560 K7ELQ4 463 aaPredicted RBP16.14■□□□□ 0.17
SLIT3-206ENST00000519560 LARP1BQ659C4 914 aaKnown RBP16.14■□□□□ 0.17
SLIT3-206ENST00000519560 SOGA3Q5TF21 947 aa16.13■□□□□ 0.17
SLIT3-206ENST00000519560 IGF1RP08069 1367 aa16.13■□□□□ 0.17
SLIT3-206ENST00000519560 NUP62CLQ9H1M0 184 aa16.13■□□□□ 0.17
SLIT3-206ENST00000519560 PDIA4P13667 645 aaKnown RBP16.13■□□□□ 0.17
SLIT3-206ENST00000519560 NCAPD3P42695 1498 aa16.12■□□□□ 0.17
SLIT3-206ENST00000519560 MICALCLQ6ZW33 695 aa16.12■□□□□ 0.17
SLIT3-206ENST00000519560 CCDC113Q9H0I3 377 aa16.12■□□□□ 0.17
SLIT3-206ENST00000519560 CNNM1Q9NRU3 951 aa16.12■□□□□ 0.17
SLIT3-206ENST00000519560 SPA17Q15506 151 aa16.12■□□□□ 0.17
SLIT3-206ENST00000519560 GCOM1H8Y6P7 765 aaPredicted RBP16.11■□□□□ 0.17
SLIT3-206ENST00000519560 MYZAPP0CAP1 466 aa16.11■□□□□ 0.17
SLIT3-206ENST00000519560 VPS36Q86VN1 386 aa16.11■□□□□ 0.17
SLIT3-206ENST00000519560 ANKRD50Q9ULJ7 1429 aa16.11■□□□□ 0.17
SLIT3-206ENST00000519560 ARAP1Q96P48 1450 aa16.11■□□□□ 0.17
SLIT3-206ENST00000519560 PRXQ9BXM0 1461 aa16.11■□□□□ 0.17
SLIT3-206ENST00000519560 ZSCAN12O43309 604 aa16.11■□□□□ 0.17
SLIT3-206ENST00000519560 SFPQP23246 707 aaKnown RBP eCLIP16.11■□□□□ 0.17
SLIT3-206ENST00000519560 IFFO1Q0D2I5 559 aa16.11■□□□□ 0.17
SLIT3-206ENST00000519560 TICAM2Q86XR7 235 aa16.11■□□□□ 0.17
SLIT3-206ENST00000519560 SMC1AQ14683 1233 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms