RNA–Protein interactions for RNA: ENST00000519535.1

SCUBE2-205, Transcript of signal peptide, CUB domain and EGF like domain containing 2, human

TSL 3

Gene SCUBE2, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCUBE2-205	ENST00000519535	BLM	P54132	1417 aa	Predicted RBP	19.03	■□□□□ 0.64
SCUBE2-205	ENST00000519535	TMF1	P82094	1093 aa		19.03	■□□□□ 0.64
SCUBE2-205	ENST00000519535	CARD14	Q9BXL6	1004 aa		19.03	■□□□□ 0.64
SCUBE2-205	ENST00000519535	KCNH5	Q8NCM2	988 aa		19.02	■□□□□ 0.64
SCUBE2-205	ENST00000519535	ANKRD36B	Q8N2N9	1353 aa		19.02	■□□□□ 0.64
SCUBE2-205	ENST00000519535	USP54	Q70EL1	1684 aa		19.01	■□□□□ 0.63
SCUBE2-205	ENST00000519535	CRB1	P82279	1406 aa		19.01	■□□□□ 0.63
SCUBE2-205	ENST00000519535	WDR17	Q8IZU2	1322 aa		19	■□□□□ 0.63
SCUBE2-205	ENST00000519535	HSPA5	P11021	654 aa	Known RBP	19	■□□□□ 0.63
SCUBE2-205	ENST00000519535	NINL	Q9Y2I6	1382 aa		19	■□□□□ 0.63
SCUBE2-205	ENST00000519535	C11orf95	C9JLR9	678 aa	Predicted RBP	18.98	■□□□□ 0.63
SCUBE2-205	ENST00000519535	FYB1	O15117	783 aa		18.98	■□□□□ 0.63
SCUBE2-205	ENST00000519535	TOM1L2	Q6ZVM7	507 aa		18.98	■□□□□ 0.63
SCUBE2-205	ENST00000519535	CCDC125	Q86Z20	511 aa		18.98	■□□□□ 0.63
SCUBE2-205	ENST00000519535	GGNBP2	Q9H3C7	697 aa		18.97	■□□□□ 0.63
SCUBE2-205	ENST00000519535	DISP2	A7MBM2	1401 aa		18.97	■□□□□ 0.63
SCUBE2-205	ENST00000519535	PTF1A	Q7RTS3	328 aa		18.96	■□□□□ 0.63
SCUBE2-205	ENST00000519535	THRAP3	Q9Y2W1	955 aa	Known RBP	18.96	■□□□□ 0.63
SCUBE2-205	ENST00000519535	RGPD5	Q99666	1765 aa		18.96	■□□□□ 0.63
SCUBE2-205	ENST00000519535	MYOM1	P52179	1685 aa		18.95	■□□□□ 0.62
SCUBE2-205	ENST00000519535	TRIM37	O94972	964 aa		18.95	■□□□□ 0.62
SCUBE2-205	ENST00000519535	CARD10	Q9BWT7	1032 aa		18.95	■□□□□ 0.62
SCUBE2-205	ENST00000519535	MAP3K19	Q56UN5	1328 aa		18.95	■□□□□ 0.62
SCUBE2-205	ENST00000519535	EN1	Q05925	392 aa	Predicted RBP	18.94	■□□□□ 0.62
SCUBE2-205	ENST00000519535	ERBB3	P21860	1342 aa		18.94	■□□□□ 0.62
SCUBE2-205	ENST00000519535	CSB-PGBD3	P0DP91	1061 aa		18.93	■□□□□ 0.62
SCUBE2-205	ENST00000519535	SLC24A1	O60721	1099 aa		18.92	■□□□□ 0.62
SCUBE2-205	ENST00000519535	RRS1	Q15050	365 aa	Known RBP	18.92	■□□□□ 0.62
SCUBE2-205	ENST00000519535	MARCH10	Q8NA82	808 aa	Predicted RBP	18.92	■□□□□ 0.62
SCUBE2-205	ENST00000519535	ANKRD24	Q8TF21	1146 aa		18.92	■□□□□ 0.62
SCUBE2-205	ENST00000519535	COG3	Q96JB2	828 aa		18.92	■□□□□ 0.62
SCUBE2-205	ENST00000519535	LRRC37A3	O60309	1634 aa		18.92	■□□□□ 0.62
SCUBE2-205	ENST00000519535	NSD3	Q9BZ95	1437 aa		18.91	■□□□□ 0.62
SCUBE2-205	ENST00000519535	PDE3B	Q13370	1112 aa		18.91	■□□□□ 0.62
SCUBE2-205	ENST00000519535	IP6K1	Q92551	441 aa		18.91	■□□□□ 0.62
SCUBE2-205	ENST00000519535	ABCC6	O95255	1503 aa		18.9	■□□□□ 0.62
SCUBE2-205	ENST00000519535	EIF4G2	P78344	907 aa	Known RBP eCLIP	18.9	■□□□□ 0.62
SCUBE2-205	ENST00000519535	FAM196A	Q6ZSG2	479 aa		18.9	■□□□□ 0.62
SCUBE2-205	ENST00000519535	LTV1	Q96GA3	475 aa	Predicted RBP	18.9	■□□□□ 0.62
SCUBE2-205	ENST00000519535	POLR3GL	Q9BT43	218 aa		18.9	■□□□□ 0.62
SCUBE2-205	ENST00000519535	PARP4	Q9UKK3	1724 aa	Known RBP	18.9	■□□□□ 0.62
SCUBE2-205	ENST00000519535	PEAK1	Q9H792	1746 aa		18.89	■□□□□ 0.61
SCUBE2-205	ENST00000519535	TNS1	Q9HBL0	1735 aa	Known RBP	18.89	■□□□□ 0.61
SCUBE2-205	ENST00000519535	HOXC9	P31274	260 aa		18.89	■□□□□ 0.61
SCUBE2-205	ENST00000519535	EZH2	Q15910	746 aa	Known RBP	18.89	■□□□□ 0.61
SCUBE2-205	ENST00000519535	DDB1	Q16531	1140 aa		18.88	■□□□□ 0.61
SCUBE2-205	ENST00000519535	CDCA8	Q53HL2	280 aa		18.88	■□□□□ 0.61
SCUBE2-205	ENST00000519535	CAMKK2	Q96RR4	588 aa		18.88	■□□□□ 0.61
SCUBE2-205	ENST00000519535	NLRP2	Q9NX02	1062 aa		18.88	■□□□□ 0.61
SCUBE2-205	ENST00000519535	LTN1	O94822	1766 aa		18.88	■□□□□ 0.61
SCUBE2-205	ENST00000519535	SF3B2	Q13435	895 aa	Known RBP	18.86	■□□□□ 0.61
SCUBE2-205	ENST00000519535	CCDC7	Q96M83	1385 aa		18.85	■□□□□ 0.61
SCUBE2-205	ENST00000519535	BAG6	P46379	1132 aa		18.85	■□□□□ 0.61
SCUBE2-205	ENST00000519535	WNK3	Q9BYP7	1800 aa		18.85	■□□□□ 0.61
SCUBE2-205	ENST00000519535	APBA3	O96018	575 aa		18.84	■□□□□ 0.61
SCUBE2-205	ENST00000519535	PSD	A5PKW4	1024 aa	Predicted RBP	18.83	■□□□□ 0.6
SCUBE2-205	ENST00000519535	HSP90AB2P	Q58FF8	381 aa		18.83	■□□□□ 0.6
SCUBE2-205	ENST00000519535	PANK3	Q9H999	370 aa		18.83	■□□□□ 0.6
SCUBE2-205	ENST00000519535	EMILIN1	Q9Y6C2	1016 aa		18.83	■□□□□ 0.6
SCUBE2-205	ENST00000519535	RGPD1	P0DJD0	1748 aa		18.83	■□□□□ 0.6
SCUBE2-205	ENST00000519535	AMPH	P49418	695 aa		18.82	■□□□□ 0.6
SCUBE2-205	ENST00000519535	USHBP1	Q8N6Y0	703 aa		18.82	■□□□□ 0.6
SCUBE2-205	ENST00000519535	OVOS2	A0A0G2JMS6	1433 aa		18.82	■□□□□ 0.6
SCUBE2-205	ENST00000519535	TNS2	Q63HR2	1409 aa		18.82	■□□□□ 0.6
SCUBE2-205	ENST00000519535	KCNQ2	O43526	872 aa		18.81	■□□□□ 0.6
SCUBE2-205	ENST00000519535	NBPF6	Q5VWK0	638 aa		18.81	■□□□□ 0.6
SCUBE2-205	ENST00000519535	NBPF4	Q96M43	638 aa		18.81	■□□□□ 0.6
SCUBE2-205	ENST00000519535	CDCA7	Q9BWT1	371 aa	Predicted RBP	18.8	■□□□□ 0.6
SCUBE2-205	ENST00000519535	KIF7	Q2M1P5	1343 aa		18.79	■□□□□ 0.6
SCUBE2-205	ENST00000519535	EXOC5	O00471	708 aa		18.79	■□□□□ 0.6
SCUBE2-205	ENST00000519535	IL2RB	P14784	551 aa		18.79	■□□□□ 0.6
SCUBE2-205	ENST00000519535	MEGF6	O75095	1541 aa		18.79	■□□□□ 0.6
SCUBE2-205	ENST00000519535	FAM208A	Q9UK61	1670 aa	Known RBP	18.79	■□□□□ 0.6
SCUBE2-205	ENST00000519535	BCL9	O00512	1426 aa		18.78	■□□□□ 0.6
SCUBE2-205	ENST00000519535	PROM2	Q8N271	834 aa		18.78	■□□□□ 0.6
SCUBE2-205	ENST00000519535	KIF20B	Q96Q89	1820 aa		18.78	■□□□□ 0.6
SCUBE2-205	ENST00000519535	RTL1	A6NKG5	1358 aa		18.78	■□□□□ 0.6
SCUBE2-205	ENST00000519535	R3HDM1	Q15032	1099 aa	Known RBP	18.76	■□□□□ 0.59
SCUBE2-205	ENST00000519535	ACSBG1	Q96GR2	724 aa		18.76	■□□□□ 0.59
SCUBE2-205	ENST00000519535	RGPD2	P0DJD1	1756 aa		18.76	■□□□□ 0.59
SCUBE2-205	ENST00000519535	TNNT2	P45379	298 aa	Predicted RBP	18.75	■□□□□ 0.59
SCUBE2-205	ENST00000519535	BCL11B	Q9C0K0	894 aa	Predicted RBP	18.75	■□□□□ 0.59
SCUBE2-205	ENST00000519535	POLK	Q9UBT6	870 aa		18.75	■□□□□ 0.59
SCUBE2-205	ENST00000519535	INSR	P06213	1382 aa		18.75	■□□□□ 0.59
SCUBE2-205	ENST00000519535	CGNL1	Q0VF96	1302 aa		18.74	■□□□□ 0.59
SCUBE2-205	ENST00000519535	FLT4	P35916	1363 aa		18.73	■□□□□ 0.59
SCUBE2-205	ENST00000519535	SBF2	Q86WG5	1849 aa		18.73	■□□□□ 0.59
SCUBE2-205	ENST00000519535	ANO8	Q9HCE9	1232 aa	Predicted RBP	18.73	■□□□□ 0.59
SCUBE2-205	ENST00000519535	RREB1	Q92766	1687 aa		18.71	■□□□□ 0.59
SCUBE2-205	ENST00000519535	PPM1G	O15355	546 aa	Predicted RBP	18.71	■□□□□ 0.59
SCUBE2-205	ENST00000519535	DDX54	Q8TDD1	881 aa	Known RBP	18.71	■□□□□ 0.59
SCUBE2-205	ENST00000519535	PARD3	Q8TEW0	1356 aa		18.69	■□□□□ 0.58
SCUBE2-205	ENST00000519535	NUP188	Q5SRE5	1749 aa		18.69	■□□□□ 0.58
SCUBE2-205	ENST00000519535	AMER1	Q5JTC6	1135 aa	Predicted RBP	18.69	■□□□□ 0.58
SCUBE2-205	ENST00000519535	WASHC2A	Q641Q2	1341 aa		18.69	■□□□□ 0.58
SCUBE2-205	ENST00000519535	KIF24	Q5T7B8	1368 aa		18.68	■□□□□ 0.58
SCUBE2-205	ENST00000519535	PLSCR1	O15162	318 aa		18.68	■□□□□ 0.58
SCUBE2-205	ENST00000519535	PDGFD	Q9GZP0	370 aa	Predicted RBP	18.68	■□□□□ 0.58
SCUBE2-205	ENST00000519535	SHANK3	Q9BYB0	1731 aa		18.68	■□□□□ 0.58
SCUBE2-205	ENST00000519535	NCAPD2	Q15021	1401 aa		18.67	■□□□□ 0.58

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