RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 USP31Q70CQ4 1352 aa17.59■□□□□ 0.41
TRAPPC9-206ENST00000519482 WDR17Q8IZU2 1322 aa17.59■□□□□ 0.41
TRAPPC9-206ENST00000519482 C11orf95C9JLR9 678 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC9-206ENST00000519482 TRIM37O94972 964 aa17.59■□□□□ 0.41
TRAPPC9-206ENST00000519482 AXIN2Q9Y2T1 843 aa17.59■□□□□ 0.41
TRAPPC9-206ENST00000519482 LRP5O75197 1615 aa17.58■□□□□ 0.41
TRAPPC9-206ENST00000519482 PARD3Q8TEW0 1356 aa17.58■□□□□ 0.4
TRAPPC9-206ENST00000519482 SLC24A1O60721 1099 aa17.58■□□□□ 0.4
TRAPPC9-206ENST00000519482 TOM1L2Q6ZVM7 507 aa17.58■□□□□ 0.4
TRAPPC9-206ENST00000519482 SBF2Q86WG5 1849 aa17.58■□□□□ 0.4
TRAPPC9-206ENST00000519482 PEAK1Q9H792 1746 aa17.58■□□□□ 0.4
TRAPPC9-206ENST00000519482 HDGFL2Q7Z4V5 671 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC9-206ENST00000519482 TMC1Q8TDI8 760 aa17.57■□□□□ 0.4
TRAPPC9-206ENST00000519482 LTN1O94822 1766 aa17.57■□□□□ 0.4
TRAPPC9-206ENST00000519482 RREB1Q92766 1687 aa17.57■□□□□ 0.4
TRAPPC9-206ENST00000519482 APBA3O96018 575 aa17.56■□□□□ 0.4
TRAPPC9-206ENST00000519482 EZH2Q15910 746 aaKnown RBP17.56■□□□□ 0.4
TRAPPC9-206ENST00000519482 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.56■□□□□ 0.4
TRAPPC9-206ENST00000519482 CAMKK2Q96RR4 588 aa17.56■□□□□ 0.4
TRAPPC9-206ENST00000519482 SLC12A5Q9H2X9 1139 aa17.56■□□□□ 0.4
TRAPPC9-206ENST00000519482 TERF2IPQ9NYB0 399 aa17.56■□□□□ 0.4
TRAPPC9-206ENST00000519482 EDC4Q6P2E9 1401 aaKnown RBP17.55■□□□□ 0.4
TRAPPC9-206ENST00000519482 SOX12O15370 315 aa17.55■□□□□ 0.4
TRAPPC9-206ENST00000519482 CDCA7Q9BWT1 371 aaPredicted RBP17.55■□□□□ 0.4
TRAPPC9-206ENST00000519482 OVOS2A0A0G2JMS6 1433 aa17.55■□□□□ 0.4
TRAPPC9-206ENST00000519482 OVOS2A0A0J9YW53 1432 aa17.55■□□□□ 0.4
TRAPPC9-206ENST00000519482 OVOS2Q6IE36 1432 aa17.55■□□□□ 0.4
TRAPPC9-206ENST00000519482 NINLQ9Y2I6 1382 aa17.54■□□□□ 0.4
TRAPPC9-206ENST00000519482 DDB1Q16531 1140 aa17.54■□□□□ 0.4
TRAPPC9-206ENST00000519482 CCER1Q8TC90 406 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC9-206ENST00000519482 CARD10Q9BWT7 1032 aa17.54■□□□□ 0.4
TRAPPC9-206ENST00000519482 RGPD3A6NKT7 1758 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC9-206ENST00000519482 RGPD4Q7Z3J3 1758 aa17.53■□□□□ 0.4
TRAPPC9-206ENST00000519482 ST20-MTHFSA0A0A6YYL1 179 aa17.53■□□□□ 0.4
TRAPPC9-206ENST00000519482 PSDA5PKW4 1024 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC9-206ENST00000519482 NME9Q86XW9 330 aa17.53■□□□□ 0.4
TRAPPC9-206ENST00000519482 TESK2Q96S53 571 aa17.53■□□□□ 0.4
TRAPPC9-206ENST00000519482 A0A1W2PP64 1363 aa17.53■□□□□ 0.4
TRAPPC9-206ENST00000519482 NUP188Q5SRE5 1749 aa17.52■□□□□ 0.4
TRAPPC9-206ENST00000519482 CSB-PGBD3P0DP91 1061 aa17.52■□□□□ 0.4
TRAPPC9-206ENST00000519482 CCDC7Q96M83 1385 aa17.52■□□□□ 0.39
TRAPPC9-206ENST00000519482 BCL9O00512 1426 aa17.49■□□□□ 0.39
TRAPPC9-206ENST00000519482 R3HDM1Q15032 1099 aaKnown RBP17.49■□□□□ 0.39
TRAPPC9-206ENST00000519482 ERBB3P21860 1342 aa17.47■□□□□ 0.39
TRAPPC9-206ENST00000519482 FAM208AQ9UK61 1670 aaKnown RBP17.46■□□□□ 0.39
TRAPPC9-206ENST00000519482 USP47Q96K76 1375 aa17.46■□□□□ 0.39
TRAPPC9-206ENST00000519482 EXOC5O00471 708 aa17.46■□□□□ 0.39
TRAPPC9-206ENST00000519482 NBPF14Q5TI25 921 aa17.46■□□□□ 0.39
TRAPPC9-206ENST00000519482 MARCH10Q8NA82 808 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC9-206ENST00000519482 TIMELESSQ9UNS1 1208 aa17.46■□□□□ 0.39
TRAPPC9-206ENST00000519482 PLSCR1O15162 318 aa17.45■□□□□ 0.38
TRAPPC9-206ENST00000519482 TMF1P82094 1093 aa17.45■□□□□ 0.38
TRAPPC9-206ENST00000519482 BCL11BQ9C0K0 894 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC9-206ENST00000519482 ANKRD36BQ8N2N9 1353 aa17.44■□□□□ 0.38
TRAPPC9-206ENST00000519482 TNS2Q63HR2 1409 aa17.44■□□□□ 0.38
TRAPPC9-206ENST00000519482 CLSPNQ9HAW4 1339 aa17.44■□□□□ 0.38
TRAPPC9-206ENST00000519482 NLRP2Q9NX02 1062 aa17.43■□□□□ 0.38
TRAPPC9-206ENST00000519482 ANKRD24Q8TF21 1146 aa17.42■□□□□ 0.38
TRAPPC9-206ENST00000519482 COG3Q96JB2 828 aa17.42■□□□□ 0.38
TRAPPC9-206ENST00000519482 CDCA8Q53HL2 280 aa17.41■□□□□ 0.38
TRAPPC9-206ENST00000519482 IP6K1Q92551 441 aa17.41■□□□□ 0.38
TRAPPC9-206ENST00000519482 NHSQ6T4R5 1651 aa17.4■□□□□ 0.38
TRAPPC9-206ENST00000519482 IL2RBP14784 551 aa17.4■□□□□ 0.38
TRAPPC9-206ENST00000519482 KIF20BQ96Q89 1820 aa17.4■□□□□ 0.38
TRAPPC9-206ENST00000519482 PTF1AQ7RTS3 328 aa17.38■□□□□ 0.37
TRAPPC9-206ENST00000519482 KAT6BQ8WYB5 2073 aa17.37■□□□□ 0.37
TRAPPC9-206ENST00000519482 MAP3K19Q56UN5 1328 aa17.37■□□□□ 0.37
TRAPPC9-206ENST00000519482 MYOM1P52179 1685 aa17.36■□□□□ 0.37
TRAPPC9-206ENST00000519482 RGPD2P0DJD1 1756 aa17.36■□□□□ 0.37
TRAPPC9-206ENST00000519482 FYB1O15117 783 aa17.35■□□□□ 0.37
TRAPPC9-206ENST00000519482 HOXC9P31274 260 aa17.35■□□□□ 0.37
TRAPPC9-206ENST00000519482 AMPHP49418 695 aa17.35■□□□□ 0.37
TRAPPC9-206ENST00000519482 RTL1A6NKG5 1358 aa17.35■□□□□ 0.37
TRAPPC9-206ENST00000519482 BTAF1O14981 1849 aa17.34■□□□□ 0.37
TRAPPC9-206ENST00000519482 CASZ1Q86V15 1759 aa17.34■□□□□ 0.37
TRAPPC9-206ENST00000519482 PROM2Q8N271 834 aa17.34■□□□□ 0.37
TRAPPC9-206ENST00000519482 LTV1Q96GA3 475 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC9-206ENST00000519482 KCNQ2O43526 872 aa17.32■□□□□ 0.36
TRAPPC9-206ENST00000519482 TXNRD1Q16881 649 aa17.32■□□□□ 0.36
TRAPPC9-206ENST00000519482 GGNBP2Q9H3C7 697 aa17.32■□□□□ 0.36
TRAPPC9-206ENST00000519482 FBLN1P23142 703 aa17.31■□□□□ 0.36
TRAPPC9-206ENST00000519482 ACSBG1Q96GR2 724 aa17.31■□□□□ 0.36
TRAPPC9-206ENST00000519482 SPON1Q9HCB6 807 aa17.31■□□□□ 0.36
TRAPPC9-206ENST00000519482 ANO8Q9HCE9 1232 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC9-206ENST00000519482 SHANK3Q9BYB0 1731 aa17.3■□□□□ 0.36
TRAPPC9-206ENST00000519482 KIF24Q5T7B8 1368 aa17.29■□□□□ 0.36
TRAPPC9-206ENST00000519482 RRS1Q15050 365 aaKnown RBP17.29■□□□□ 0.36
TRAPPC9-206ENST00000519482 STK32BQ9NY57 414 aa17.28■□□□□ 0.36
TRAPPC9-206ENST00000519482 SMG6Q86US8 1419 aaKnown RBP17.28■□□□□ 0.36
TRAPPC9-206ENST00000519482 DDX54Q8TDD1 881 aaKnown RBP17.27■□□□□ 0.36
TRAPPC9-206ENST00000519482 CARD14Q9BXL6 1004 aa17.27■□□□□ 0.36
TRAPPC9-206ENST00000519482 PAPPAQ13219 1627 aa17.27■□□□□ 0.36
TRAPPC9-206ENST00000519482 NSD3Q9BZ95 1437 aa17.27■□□□□ 0.35
TRAPPC9-206ENST00000519482 DOT1LQ8TEK3 1739 aa17.27■□□□□ 0.35
TRAPPC9-206ENST00000519482 SLC15A2Q16348 729 aa17.26■□□□□ 0.35
TRAPPC9-206ENST00000519482 INSRP06213 1382 aa17.26■□□□□ 0.35
TRAPPC9-206ENST00000519482 FLT4P35916 1363 aa17.26■□□□□ 0.35
TRAPPC9-206ENST00000519482 MAP2P11137 1827 aaKnown RBP17.26■□□□□ 0.35
TRAPPC9-206ENST00000519482 CGNL1Q0VF96 1302 aa17.25■□□□□ 0.35
TRAPPC9-206ENST00000519482 ANKRD26Q9UPS8 1709 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms