RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 GOLGA2Q08379 1002 aa14.04□□□□□ -0.16
SPIDR-211ENST00000519401 GEMIN8Q9NWZ8 242 aaKnown RBP14.04□□□□□ -0.16
SPIDR-211ENST00000519401 STAG3Q9UJ98 1225 aa14.04□□□□□ -0.16
SPIDR-211ENST00000519401 LTKP29376 864 aa14.03□□□□□ -0.16
SPIDR-211ENST00000519401 AXDND1Q5T1B0 1012 aaPredicted RBP14.03□□□□□ -0.16
SPIDR-211ENST00000519401 CALCOCO1Q9P1Z2 691 aa14.03□□□□□ -0.16
SPIDR-211ENST00000519401 TMEM2Q9UHN6 1383 aa14.03□□□□□ -0.16
SPIDR-211ENST00000519401 MED14O60244 1454 aa14.03□□□□□ -0.16
SPIDR-211ENST00000519401 KDM5AP29375 1690 aaKnown RBP14.03□□□□□ -0.16
SPIDR-211ENST00000519401 NPHP4O75161 1426 aaPredicted RBP14.02□□□□□ -0.16
SPIDR-211ENST00000519401 TRPM1Q7Z4N2 1603 aa14.02□□□□□ -0.16
SPIDR-211ENST00000519401 SCAF11Q99590 1463 aaKnown RBP14.02□□□□□ -0.16
SPIDR-211ENST00000519401 NPC1L1Q9UHC9 1359 aa14.02□□□□□ -0.16
SPIDR-211ENST00000519401 EFCC1Q9HA90 598 aa14.02□□□□□ -0.16
SPIDR-211ENST00000519401 DDX49Q9Y6V7 483 aaKnown RBP14.02□□□□□ -0.16
SPIDR-211ENST00000519401 ZBTB22O15209 634 aa14.02□□□□□ -0.17
SPIDR-211ENST00000519401 SLFN5Q08AF3 891 aa14.02□□□□□ -0.17
SPIDR-211ENST00000519401 SYCP1Q15431 976 aa14.02□□□□□ -0.17
SPIDR-211ENST00000519401 POLR3GLQ9BT43 218 aa14.02□□□□□ -0.17
SPIDR-211ENST00000519401 SPHKAPQ2M3C7 1700 aa14.02□□□□□ -0.17
SPIDR-211ENST00000519401 TMEM131LA2VDJ0 1609 aa14.01□□□□□ -0.17
SPIDR-211ENST00000519401 TXNDC2Q86VQ3 553 aa14.01□□□□□ -0.17
SPIDR-211ENST00000519401 PIBF1Q8WXW3 757 aa14.01□□□□□ -0.17
SPIDR-211ENST00000519401 CARD11Q9BXL7 1154 aa14.01□□□□□ -0.17
SPIDR-211ENST00000519401 ZNF335Q9H4Z2 1342 aaPredicted RBP14.01□□□□□ -0.17
SPIDR-211ENST00000519401 RBSNQ9H1K0 784 aa14□□□□□ -0.17
SPIDR-211ENST00000519401 BCL2L12Q9HB09 334 aa14□□□□□ -0.17
SPIDR-211ENST00000519401 LAMC1P11047 1609 aa14□□□□□ -0.17
SPIDR-211ENST00000519401 TRPM2O94759 1503 aa14□□□□□ -0.17
SPIDR-211ENST00000519401 CHGAP10645 457 aaKnown RBP14□□□□□ -0.17
SPIDR-211ENST00000519401 ZSCAN23Q3MJ62 389 aa14□□□□□ -0.17
SPIDR-211ENST00000519401 LTBP4Q8N2S1 1624 aa14□□□□□ -0.17
SPIDR-211ENST00000519401 PLEKHH1Q9ULM0 1364 aa13.99□□□□□ -0.17
SPIDR-211ENST00000519401 SLFN14P0C7P3 912 aa13.99□□□□□ -0.17
SPIDR-211ENST00000519401 SPTLC3Q9NUV7 552 aa13.99□□□□□ -0.17
SPIDR-211ENST00000519401 IQGAP1P46940 1657 aa13.99□□□□□ -0.17
SPIDR-211ENST00000519401 CLTCL1P53675 1640 aa13.99□□□□□ -0.17
SPIDR-211ENST00000519401 NGEFQ8N5V2 710 aa13.99□□□□□ -0.17
SPIDR-211ENST00000519401 DIAPH3Q9NSV4 1193 aa13.99□□□□□ -0.17
SPIDR-211ENST00000519401 MYO5BQ9ULV0 1848 aa13.98□□□□□ -0.17
SPIDR-211ENST00000519401 ZFYVE9O95405 1425 aa13.98□□□□□ -0.17
SPIDR-211ENST00000519401 PER1O15534 1290 aaPredicted RBP13.98□□□□□ -0.17
SPIDR-211ENST00000519401 EID1Q9Y6B2 187 aa13.98□□□□□ -0.17
SPIDR-211ENST00000519401 RIMS2Q9UQ26 1411 aa13.98□□□□□ -0.17
SPIDR-211ENST00000519401 ST20-MTHFSA0A0A6YYL1 179 aa13.97□□□□□ -0.17
SPIDR-211ENST00000519401 CTIFO43310 598 aaKnown RBP13.97□□□□□ -0.17
SPIDR-211ENST00000519401 FKBP5Q13451 457 aaPredicted RBP13.97□□□□□ -0.17
SPIDR-211ENST00000519401 CERKQ8TCT0 537 aa13.97□□□□□ -0.17
SPIDR-211ENST00000519401 CHMP4AQ9BY43 222 aa13.97□□□□□ -0.17
SPIDR-211ENST00000519401 ZNF622Q969S3 477 aaKnown RBP eCLIP13.97□□□□□ -0.17
SPIDR-211ENST00000519401 BAG4O95429 457 aaKnown RBP13.96□□□□□ -0.17
SPIDR-211ENST00000519401 PSEN1P49768 467 aa13.96□□□□□ -0.17
SPIDR-211ENST00000519401 FBXO41Q8TF61 875 aa13.96□□□□□ -0.17
SPIDR-211ENST00000519401 PRAG1Q86YV5 1406 aa13.96□□□□□ -0.17
SPIDR-211ENST00000519401 LRSAM1Q6UWE0 723 aa13.95□□□□□ -0.18
SPIDR-211ENST00000519401 GPRASP1Q5JY77 1395 aa13.95□□□□□ -0.18
SPIDR-211ENST00000519401 SPDYE4A6NLX3 237 aa13.95□□□□□ -0.18
SPIDR-211ENST00000519401 NOLC1Q14978 699 aaKnown RBP eCLIP13.95□□□□□ -0.18
SPIDR-211ENST00000519401 PDZRN3Q9UPQ7 1066 aa13.95□□□□□ -0.18
SPIDR-211ENST00000519401 MFAP1P55081 439 aaKnown RBP13.94□□□□□ -0.18
SPIDR-211ENST00000519401 NUTM2DQ5VT03 806 aaPredicted RBP13.94□□□□□ -0.18
SPIDR-211ENST00000519401 RWDD1Q9H446 243 aaPredicted RBP13.94□□□□□ -0.18
SPIDR-211ENST00000519401 SENP3Q9H4L4 574 aaPredicted RBP13.94□□□□□ -0.18
SPIDR-211ENST00000519401 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.94□□□□□ -0.18
SPIDR-211ENST00000519401 U2AF2P26368 475 aaKnown RBP eCLIP13.94□□□□□ -0.18
SPIDR-211ENST00000519401 TERF2Q15554 542 aa13.94□□□□□ -0.18
SPIDR-211ENST00000519401 MORC2Q9Y6X9 1032 aaPredicted RBP13.94□□□□□ -0.18
SPIDR-211ENST00000519401 CAPN2P17655 700 aa13.93□□□□□ -0.18
SPIDR-211ENST00000519401 PRIM1P49642 420 aaKnown RBP13.93□□□□□ -0.18
SPIDR-211ENST00000519401 CHAF1AQ13111 956 aaPredicted RBP13.92□□□□□ -0.18
SPIDR-211ENST00000519401 DHX37Q8IY37 1157 aaKnown RBP13.92□□□□□ -0.18
SPIDR-211ENST00000519401 DDX41Q9UJV9 622 aaKnown RBP13.92□□□□□ -0.18
SPIDR-211ENST00000519401 HDAC5Q9UQL6 1122 aa13.92□□□□□ -0.18
SPIDR-211ENST00000519401 E9PSI1 815 aa13.92□□□□□ -0.18
SPIDR-211ENST00000519401 CTR9Q6PD62 1173 aa13.92□□□□□ -0.18
SPIDR-211ENST00000519401 NUCB2P80303 420 aa13.91□□□□□ -0.18
SPIDR-211ENST00000519401 SLC26A8Q96RN1 970 aa13.91□□□□□ -0.18
SPIDR-211ENST00000519401 PLEKHG1Q9ULL1 1385 aa13.91□□□□□ -0.18
SPIDR-211ENST00000519401 K7ELQ4 463 aaPredicted RBP13.91□□□□□ -0.18
SPIDR-211ENST00000519401 PTMAP06454 111 aaKnown RBP13.91□□□□□ -0.18
SPIDR-211ENST00000519401 CAVIN1Q6NZI2 390 aaKnown RBP13.91□□□□□ -0.18
SPIDR-211ENST00000519401 LMBRD1Q9NUN5 540 aa13.91□□□□□ -0.18
SPIDR-211ENST00000519401 CTNNA3Q9UI47 895 aa13.91□□□□□ -0.18
SPIDR-211ENST00000519401 KDM2AQ9Y2K7 1162 aa13.91□□□□□ -0.18
SPIDR-211ENST00000519401 TRIM6-TRIM34B2RNG4 842 aa13.9□□□□□ -0.18
SPIDR-211ENST00000519401 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.9□□□□□ -0.18
SPIDR-211ENST00000519401 TRIM34Q9BYJ4 488 aa13.9□□□□□ -0.18
SPIDR-211ENST00000519401 ADAMTS8Q9UP79 889 aa13.9□□□□□ -0.18
SPIDR-211ENST00000519401 STRCP1A6NGW2 1772 aa13.89□□□□□ -0.19
SPIDR-211ENST00000519401 UVSSAQ2YD98 709 aa13.89□□□□□ -0.19
SPIDR-211ENST00000519401 TSC1Q92574 1164 aa13.89□□□□□ -0.19
SPIDR-211ENST00000519401 SSFA2P28290 1259 aa13.89□□□□□ -0.19
SPIDR-211ENST00000519401 NEXMIFQ5QGS0 1516 aa13.89□□□□□ -0.19
SPIDR-211ENST00000519401 CPS1P31327 1500 aa13.88□□□□□ -0.19
SPIDR-211ENST00000519401 SOX12O15370 315 aa13.88□□□□□ -0.19
SPIDR-211ENST00000519401 HDGFP51858 240 aaKnown RBP13.88□□□□□ -0.19
SPIDR-211ENST00000519401 BCAR3O75815 825 aa13.87□□□□□ -0.19
SPIDR-211ENST00000519401 FEZ2Q9UHY8 353 aaPredicted RBP13.87□□□□□ -0.19
SPIDR-211ENST00000519401 ADAMTS13Q76LX8 1427 aa13.87□□□□□ -0.19
SPIDR-211ENST00000519401 KIF1BO60333 1816 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms