RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 FLT4P35916 1363 aa19.14■□□□□ 0.65
CLN8-204ENST00000519254 HSP90AB2PQ58FF8 381 aa19.14■□□□□ 0.65
CLN8-204ENST00000519254 U2AF1L5P0DN76 240 aaPredicted RBP19.13■□□□□ 0.65
CLN8-204ENST00000519254 U2AF1Q01081 240 aaKnown RBP eCLIP19.13■□□□□ 0.65
CLN8-204ENST00000519254 CDCA7LQ96GN5 454 aa19.13■□□□□ 0.65
CLN8-204ENST00000519254 ZC3H6P61129 1189 aaKnown RBP19.12■□□□□ 0.65
CLN8-204ENST00000519254 CRYBG1Q9Y4K1 1723 aa19.12■□□□□ 0.65
CLN8-204ENST00000519254 HAP1P54257 671 aaPredicted RBP19.11■□□□□ 0.65
CLN8-204ENST00000519254 LRRC59Q96AG4 307 aaKnown RBP19.11■□□□□ 0.65
CLN8-204ENST00000519254 ZNF521Q96K83 1311 aa19.11■□□□□ 0.65
CLN8-204ENST00000519254 HOXC9P31274 260 aa19.11■□□□□ 0.65
CLN8-204ENST00000519254 IRX6P78412 446 aaPredicted RBP19.1■□□□□ 0.65
CLN8-204ENST00000519254 RNF123Q5XPI4 1314 aa19.1■□□□□ 0.65
CLN8-204ENST00000519254 APAF1O14727 1248 aa19.09■□□□□ 0.65
CLN8-204ENST00000519254 IL13P35225 146 aa19.09■□□□□ 0.65
CLN8-204ENST00000519254 EIF4A2Q14240 407 aaKnown RBP19.09■□□□□ 0.65
CLN8-204ENST00000519254 ARHGEF25Q86VW2 580 aa19.09■□□□□ 0.65
CLN8-204ENST00000519254 RTL1A6NKG5 1358 aa19.09■□□□□ 0.65
CLN8-204ENST00000519254 COL16A1Q07092 1604 aaPredicted RBP19.09■□□□□ 0.65
CLN8-204ENST00000519254 KIF24Q5T7B8 1368 aa19.08■□□□□ 0.65
CLN8-204ENST00000519254 ABCA3Q99758 1704 aa19.08■□□□□ 0.65
CLN8-204ENST00000519254 LTV1Q96GA3 475 aaPredicted RBP19.08■□□□□ 0.64
CLN8-204ENST00000519254 IP6K1Q92551 441 aa19.06■□□□□ 0.64
CLN8-204ENST00000519254 KIAA0232Q92628 1395 aa19.06■□□□□ 0.64
CLN8-204ENST00000519254 HMOX1P09601 288 aa19.05■□□□□ 0.64
CLN8-204ENST00000519254 NGEFQ8N5V2 710 aa19.05■□□□□ 0.64
CLN8-204ENST00000519254 RUNDC1Q96C34 613 aa19.05■□□□□ 0.64
CLN8-204ENST00000519254 CHRNA2Q15822 529 aa19.04■□□□□ 0.64
CLN8-204ENST00000519254 ERICH6BQ5W0A0 696 aa19.04■□□□□ 0.64
CLN8-204ENST00000519254 GOLGA2Q08379 1002 aa19.02■□□□□ 0.64
CLN8-204ENST00000519254 PRDM11Q9NQV5 511 aa19.02■□□□□ 0.64
CLN8-204ENST00000519254 AXIN2Q9Y2T1 843 aa19.02■□□□□ 0.64
CLN8-204ENST00000519254 COL22A1Q8NFW1 1626 aaPredicted RBP19.02■□□□□ 0.63
CLN8-204ENST00000519254 RCAN3Q9UKA8 241 aa19.01■□□□□ 0.63
CLN8-204ENST00000519254 RGPD5Q99666 1765 aa19.01■□□□□ 0.63
CLN8-204ENST00000519254 CPDO75976 1380 aa19.01■□□□□ 0.63
CLN8-204ENST00000519254 RGPD1P0DJD0 1748 aa19.01■□□□□ 0.63
CLN8-204ENST00000519254 PRKAR2BP31323 418 aa19■□□□□ 0.63
CLN8-204ENST00000519254 SLFN5Q08AF3 891 aa19■□□□□ 0.63
CLN8-204ENST00000519254 DUSP27Q5VZP5 1158 aa19■□□□□ 0.63
CLN8-204ENST00000519254 SULT6B1Q6IMI4 303 aa19■□□□□ 0.63
CLN8-204ENST00000519254 AEBP1Q8IUX7 1158 aa19■□□□□ 0.63
CLN8-204ENST00000519254 TCP11L2Q8N4U5 519 aa19■□□□□ 0.63
CLN8-204ENST00000519254 RSPH6AQ9H0K4 717 aa19■□□□□ 0.63
CLN8-204ENST00000519254 MAPK8IP3Q9UPT6 1336 aa18.99■□□□□ 0.63
CLN8-204ENST00000519254 TRMT2AQ8IZ69 625 aaKnown RBP18.99■□□□□ 0.63
CLN8-204ENST00000519254 ANKRD24Q8TF21 1146 aa18.99■□□□□ 0.63
CLN8-204ENST00000519254 EYA1Q99502 592 aa18.99■□□□□ 0.63
CLN8-204ENST00000519254 COL18A1P39060 1754 aa18.99■□□□□ 0.63
CLN8-204ENST00000519254 FCHSD2O94868 740 aa18.98■□□□□ 0.63
CLN8-204ENST00000519254 PLEKHF1Q96S99 279 aa18.98■□□□□ 0.63
CLN8-204ENST00000519254 RRP7AQ9Y3A4 280 aaKnown RBP18.98■□□□□ 0.63
CLN8-204ENST00000519254 WWC1Q8IX03 1113 aa18.97■□□□□ 0.63
CLN8-204ENST00000519254 USHBP1Q8N6Y0 703 aa18.97■□□□□ 0.63
CLN8-204ENST00000519254 PHF23Q9BUL5 403 aaPredicted RBP18.97■□□□□ 0.63
CLN8-204ENST00000519254 PNNQ9H307 717 aaKnown RBP18.97■□□□□ 0.63
CLN8-204ENST00000519254 SPINK5Q9NQ38 1064 aaPredicted RBP18.97■□□□□ 0.63
CLN8-204ENST00000519254 IGSF1Q8N6C5 1336 aa18.97■□□□□ 0.63
CLN8-204ENST00000519254 NUTM2BA6NNL0 878 aaPredicted RBP18.96■□□□□ 0.63
CLN8-204ENST00000519254 NUTM2EB1AL46 878 aaPredicted RBP18.96■□□□□ 0.63
CLN8-204ENST00000519254 NEFMP07197 916 aa18.96■□□□□ 0.63
CLN8-204ENST00000519254 NEUROD2Q15784 382 aa18.96■□□□□ 0.63
CLN8-204ENST00000519254 NUTM2AQ8IVF1 878 aaPredicted RBP18.96■□□□□ 0.63
CLN8-204ENST00000519254 RGPD2P0DJD1 1756 aa18.96■□□□□ 0.63
CLN8-204ENST00000519254 ABCC6O95255 1503 aa18.96■□□□□ 0.63
CLN8-204ENST00000519254 ERBB3P21860 1342 aa18.95■□□□□ 0.62
CLN8-204ENST00000519254 CSB-PGBD3P0DP91 1061 aa18.95■□□□□ 0.62
CLN8-204ENST00000519254 HSPA1LP34931 641 aa18.95■□□□□ 0.62
CLN8-204ENST00000519254 FAM83GA6ND36 823 aa18.94■□□□□ 0.62
CLN8-204ENST00000519254 RRP1P56182 461 aaKnown RBP18.94■□□□□ 0.62
CLN8-204ENST00000519254 NCBP3Q53F19 620 aaKnown RBP18.94■□□□□ 0.62
CLN8-204ENST00000519254 NBPF6Q5VWK0 638 aa18.94■□□□□ 0.62
CLN8-204ENST00000519254 NBPF4Q96M43 638 aa18.94■□□□□ 0.62
CLN8-204ENST00000519254 LMO7Q8WWI1 1683 aa18.93■□□□□ 0.62
CLN8-204ENST00000519254 ADAMTS2O95450 1211 aa18.93■□□□□ 0.62
CLN8-204ENST00000519254 PHACTR3Q96KR7 559 aa18.93■□□□□ 0.62
CLN8-204ENST00000519254 PPP4R2Q9NY27 417 aa18.93■□□□□ 0.62
CLN8-204ENST00000519254 JCADQ9P266 1359 aa18.93■□□□□ 0.62
CLN8-204ENST00000519254 CAMTA1Q9Y6Y1 1673 aa18.93■□□□□ 0.62
CLN8-204ENST00000519254 E9PSI1 815 aa18.93■□□□□ 0.62
CLN8-204ENST00000519254 CCDC27Q2M243 656 aa18.93■□□□□ 0.62
CLN8-204ENST00000519254 NLRP2Q9NX02 1062 aa18.92■□□□□ 0.62
CLN8-204ENST00000519254 KDRP35968 1356 aa18.92■□□□□ 0.62
CLN8-204ENST00000519254 STRN4Q9NRL3 753 aa18.91■□□□□ 0.62
CLN8-204ENST00000519254 COL14A1Q05707 1796 aaKnown RBP18.9■□□□□ 0.62
CLN8-204ENST00000519254 TMPOP42166 694 aaKnown RBP18.9■□□□□ 0.62
CLN8-204ENST00000519254 COL5A2P05997 1499 aaPredicted RBP18.89■□□□□ 0.62
CLN8-204ENST00000519254 WDR63Q8IWG1 891 aa18.89■□□□□ 0.61
CLN8-204ENST00000519254 BTG4Q9NY30 223 aa18.88■□□□□ 0.61
CLN8-204ENST00000519254 FAM208AQ9UK61 1670 aaKnown RBP18.88■□□□□ 0.61
CLN8-204ENST00000519254 RIPK4P57078 832 aa18.88■□□□□ 0.61
CLN8-204ENST00000519254 EVA1CP58658 441 aa18.88■□□□□ 0.61
CLN8-204ENST00000519254 NFE2L2Q16236 605 aa18.87■□□□□ 0.61
CLN8-204ENST00000519254 WDR17Q8IZU2 1322 aa18.86■□□□□ 0.61
CLN8-204ENST00000519254 TOM1L2Q6ZVM7 507 aa18.86■□□□□ 0.61
CLN8-204ENST00000519254 PLCH1Q4KWH8 1693 aa18.86■□□□□ 0.61
CLN8-204ENST00000519254 TRIM35Q9UPQ4 493 aa18.85■□□□□ 0.61
CLN8-204ENST00000519254 NCAPD2Q15021 1401 aa18.84■□□□□ 0.61
CLN8-204ENST00000519254 LARP1Q6PKG0 1096 aaKnown RBP18.84■□□□□ 0.61
CLN8-204ENST00000519254 PELP1Q8IZL8 1130 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms