RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 ZBTB7CA1YPR0 619 aa22.29■■□□□ 1.16
MRPS28-204ENST00000519120 TESK2Q96S53 571 aa22.29■■□□□ 1.16
MRPS28-204ENST00000519120 TERF2IPQ9NYB0 399 aa22.29■■□□□ 1.16
MRPS28-204ENST00000519120 EN1Q05925 392 aaPredicted RBP22.28■■□□□ 1.16
MRPS28-204ENST00000519120 TMC1Q8TDI8 760 aa22.28■■□□□ 1.16
MRPS28-204ENST00000519120 AXIN2Q9Y2T1 843 aa22.28■■□□□ 1.16
MRPS28-204ENST00000519120 SRCAPQ6ZRS2 3230 aa22.27■■□□□ 1.16
MRPS28-204ENST00000519120 TOM1L2Q6ZVM7 507 aa22.27■■□□□ 1.16
MRPS28-204ENST00000519120 SLC12A5Q9H2X9 1139 aa22.27■■□□□ 1.16
MRPS28-204ENST00000519120 ST20-MTHFSA0A0A6YYL1 179 aa22.26■■□□□ 1.15
MRPS28-204ENST00000519120 TRIM37O94972 964 aa22.26■■□□□ 1.15
MRPS28-204ENST00000519120 CDCA7Q9BWT1 371 aaPredicted RBP22.26■■□□□ 1.15
MRPS28-204ENST00000519120 A0A1W2PP64 1363 aa22.25■■□□□ 1.15
MRPS28-204ENST00000519120 LRRC37A3O60309 1634 aa22.24■■□□□ 1.15
MRPS28-204ENST00000519120 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.24■■□□□ 1.157e-7■■□□□ 13.8
MRPS28-204ENST00000519120 CARD10Q9BWT7 1032 aa22.24■■□□□ 1.15
MRPS28-204ENST00000519120 TIMELESSQ9UNS1 1208 aa22.24■■□□□ 1.15
MRPS28-204ENST00000519120 OVOS2A0A0G2JMS6 1433 aa22.23■■□□□ 1.15
MRPS28-204ENST00000519120 OVOS2A0A0J9YW53 1432 aa22.23■■□□□ 1.15
MRPS28-204ENST00000519120 OVOS2Q6IE36 1432 aa22.23■■□□□ 1.15
MRPS28-204ENST00000519120 WNK3Q9BYP7 1800 aa22.23■■□□□ 1.15
MRPS28-204ENST00000519120 NME9Q86XW9 330 aa22.23■■□□□ 1.15
MRPS28-204ENST00000519120 CAMKK2Q96RR4 588 aa22.23■■□□□ 1.15
MRPS28-204ENST00000519120 CLSPNQ9HAW4 1339 aa22.23■■□□□ 1.15
MRPS28-204ENST00000519120 PEAK1Q9H792 1746 aa22.23■■□□□ 1.15
MRPS28-204ENST00000519120 SOX12O15370 315 aa22.22■■□□□ 1.15
MRPS28-204ENST00000519120 DDB1Q16531 1140 aa22.22■■□□□ 1.15
MRPS28-204ENST00000519120 APBA3O96018 575 aa22.21■■□□□ 1.15
MRPS28-204ENST00000519120 EZH2Q15910 746 aaKnown RBP22.21■■□□□ 1.15
MRPS28-204ENST00000519120 CCDC7Q96M83 1385 aa22.21■■□□□ 1.15
MRPS28-204ENST00000519120 LRP5O75197 1615 aa22.2■■□□□ 1.15
MRPS28-204ENST00000519120 BCL9O00512 1426 aa22.2■■□□□ 1.14
MRPS28-204ENST00000519120 RGPD5Q99666 1765 aa22.2■■□□□ 1.14
MRPS28-204ENST00000519120 CSB-PGBD3P0DP91 1061 aa22.19■■□□□ 1.14
MRPS28-204ENST00000519120 USP47Q96K76 1375 aa22.19■■□□□ 1.14
MRPS28-204ENST00000519120 RREB1Q92766 1687 aa22.17■■□□□ 1.14
MRPS28-204ENST00000519120 ERBB3P21860 1342 aa22.17■■□□□ 1.14
MRPS28-204ENST00000519120 ANKRD36BQ8N2N9 1353 aa22.16■■□□□ 1.14
MRPS28-204ENST00000519120 TMF1P82094 1093 aa22.16■■□□□ 1.14
MRPS28-204ENST00000519120 LTN1O94822 1766 aa22.15■■□□□ 1.14
MRPS28-204ENST00000519120 PSDA5PKW4 1024 aaPredicted RBP22.15■■□□□ 1.14
MRPS28-204ENST00000519120 RGPD3A6NKT7 1758 aaPredicted RBP22.14■■□□□ 1.13
MRPS28-204ENST00000519120 RGPD4Q7Z3J3 1758 aa22.14■■□□□ 1.13
MRPS28-204ENST00000519120 TNS2Q63HR2 1409 aa22.13■■□□□ 1.13
MRPS28-204ENST00000519120 PLSCR1O15162 318 aa22.12■■□□□ 1.13
MRPS28-204ENST00000519120 R3HDM1Q15032 1099 aaKnown RBP22.12■■□□□ 1.13
MRPS28-204ENST00000519120 CDCA8Q53HL2 280 aa22.12■■□□□ 1.13
MRPS28-204ENST00000519120 MARCH10Q8NA82 808 aaPredicted RBP22.12■■□□□ 1.13
MRPS28-204ENST00000519120 SBF2Q86WG5 1849 aa22.12■■□□□ 1.13
MRPS28-204ENST00000519120 NUP188Q5SRE5 1749 aa22.11■■□□□ 1.13
MRPS28-204ENST00000519120 EXOC5O00471 708 aa22.11■■□□□ 1.13
MRPS28-204ENST00000519120 BCL11BQ9C0K0 894 aaPredicted RBP22.11■■□□□ 1.13
MRPS28-204ENST00000519120 COG3Q96JB2 828 aa22.1■■□□□ 1.13
MRPS28-204ENST00000519120 ANKRD24Q8TF21 1146 aa22.09■■□□□ 1.13
MRPS28-204ENST00000519120 IP6K1Q92551 441 aa22.09■■□□□ 1.13
MRPS28-204ENST00000519120 NBPF14Q5TI25 921 aa22.08■■□□□ 1.13
MRPS28-204ENST00000519120 NLRP2Q9NX02 1062 aa22.08■■□□□ 1.13
MRPS28-204ENST00000519120 FAM208AQ9UK61 1670 aaKnown RBP22.07■■□□□ 1.12
MRPS28-204ENST00000519120 IL2RBP14784 551 aa22.06■■□□□ 1.12
MRPS28-204ENST00000519120 MAP3K19Q56UN5 1328 aa22.04■■□□□ 1.12
MRPS28-204ENST00000519120 RTL1A6NKG5 1358 aa22.03■■□□□ 1.12
MRPS28-204ENST00000519120 PCGF6Q9BYE7 350 aa22.03■■□□□ 1.12
MRPS28-204ENST00000519120 FYB1O15117 783 aa22.02■■□□□ 1.12
MRPS28-204ENST00000519120 HOXC9P31274 260 aa22.01■■□□□ 1.11
MRPS28-204ENST00000519120 PTF1AQ7RTS3 328 aa22■■□□□ 1.11
MRPS28-204ENST00000519120 NHSQ6T4R5 1651 aa22■■□□□ 1.11
MRPS28-204ENST00000519120 MYOM1P52179 1685 aa21.99■■□□□ 1.11
MRPS28-204ENST00000519120 AMPHP49418 695 aa21.99■■□□□ 1.11
MRPS28-204ENST00000519120 KIF24Q5T7B8 1368 aa21.99■■□□□ 1.11
MRPS28-204ENST00000519120 GGNBP2Q9H3C7 697 aa21.98■■□□□ 1.11
MRPS28-204ENST00000519120 KIF20BQ96Q89 1820 aa21.96■■□□□ 1.11
MRPS28-204ENST00000519120 PROM2Q8N271 834 aa21.96■■□□□ 1.11
MRPS28-204ENST00000519120 TXNRD1Q16881 649 aa21.94■■□□□ 1.1
MRPS28-204ENST00000519120 LTV1Q96GA3 475 aaPredicted RBP21.94■■□□□ 1.1
MRPS28-204ENST00000519120 KCNQ2O43526 872 aa21.93■■□□□ 1.1
MRPS28-204ENST00000519120 FBLN1P23142 703 aa21.93■■□□□ 1.1
MRPS28-204ENST00000519120 CARD14Q9BXL6 1004 aa21.93■■□□□ 1.1
MRPS28-204ENST00000519120 SMG6Q86US8 1419 aaKnown RBP21.92■■□□□ 1.1
MRPS28-204ENST00000519120 NSD3Q9BZ95 1437 aa21.92■■□□□ 1.1
MRPS28-204ENST00000519120 INSRP06213 1382 aa21.92■■□□□ 1.1
MRPS28-204ENST00000519120 RRS1Q15050 365 aaKnown RBP21.92■■□□□ 1.1
MRPS28-204ENST00000519120 ANO8Q9HCE9 1232 aaPredicted RBP21.92■■□□□ 1.1
MRPS28-204ENST00000519120 FLT4P35916 1363 aa21.91■■□□□ 1.1
MRPS28-204ENST00000519120 CGNL1Q0VF96 1302 aa21.9■■□□□ 1.1
MRPS28-204ENST00000519120 SPON1Q9HCB6 807 aa21.9■■□□□ 1.1
MRPS28-204ENST00000519120 CCER1Q8TC90 406 aaPredicted RBP21.89■■□□□ 1.09
MRPS28-204ENST00000519120 ACSBG1Q96GR2 724 aa21.89■■□□□ 1.09
MRPS28-204ENST00000519120 CASZ1Q86V15 1759 aa21.89■■□□□ 1.09
MRPS28-204ENST00000519120 EIF4G2P78344 907 aaKnown RBP eCLIP21.88■■□□□ 1.09
MRPS28-204ENST00000519120 MEGF6O75095 1541 aa21.88■■□□□ 1.09
MRPS28-204ENST00000519120 BTAF1O14981 1849 aa21.87■■□□□ 1.09
MRPS28-204ENST00000519120 NBPF6Q5VWK0 638 aa21.87■■□□□ 1.09
MRPS28-204ENST00000519120 DDX54Q8TDD1 881 aaKnown RBP21.87■■□□□ 1.09
MRPS28-204ENST00000519120 NBPF4Q96M43 638 aa21.87■■□□□ 1.09
MRPS28-204ENST00000519120 STK32BQ9NY57 414 aa21.87■■□□□ 1.09
MRPS28-204ENST00000519120 RGPD2P0DJD1 1756 aa21.87■■□□□ 1.09
MRPS28-204ENST00000519120 ZCRB1Q8TBF4 217 aaKnown RBP21.86■■□□□ 1.09
MRPS28-204ENST00000519120 SLC15A2Q16348 729 aa21.85■■□□□ 1.09
MRPS28-204ENST00000519120 HSP90AB2PQ58FF8 381 aa21.85■■□□□ 1.09
MRPS28-204ENST00000519120 SHANK3Q9BYB0 1731 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms