RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 CCDC9Q9Y3X0 531 aaKnown RBP10.47□□□□□ -0.73
SDCBP-206ENST00000519115 CPDO75976 1380 aa10.47□□□□□ -0.73
SDCBP-206ENST00000519115 OVOS2A0A0J9YW53 1432 aa10.47□□□□□ -0.73
SDCBP-206ENST00000519115 OVOS2Q6IE36 1432 aa10.47□□□□□ -0.73
SDCBP-206ENST00000519115 CDK12Q9NYV4 1490 aaPredicted RBP10.47□□□□□ -0.73
SDCBP-206ENST00000519115 C11orf95C9JLR9 678 aaPredicted RBP10.46□□□□□ -0.73
SDCBP-206ENST00000519115 USP31Q70CQ4 1352 aa10.46□□□□□ -0.74
SDCBP-206ENST00000519115 NSD3Q9BZ95 1437 aa10.46□□□□□ -0.74
SDCBP-206ENST00000519115 GJD4Q96KN9 370 aaPredicted RBP10.45□□□□□ -0.74
SDCBP-206ENST00000519115 STRN4Q9NRL3 753 aa10.45□□□□□ -0.74
SDCBP-206ENST00000519115 ANKRD26Q9UPS8 1709 aa10.44□□□□□ -0.74
SDCBP-206ENST00000519115 VPS72Q15906 364 aa10.44□□□□□ -0.74
SDCBP-206ENST00000519115 CARD14Q9BXL6 1004 aa10.44□□□□□ -0.74
SDCBP-206ENST00000519115 COL5A2P05997 1499 aaPredicted RBP10.43□□□□□ -0.74
SDCBP-206ENST00000519115 AATKQ6ZMQ8 1374 aa10.43□□□□□ -0.74
SDCBP-206ENST00000519115 KIF7Q2M1P5 1343 aa10.43□□□□□ -0.74
SDCBP-206ENST00000519115 WNK3Q9BYP7 1800 aa10.43□□□□□ -0.74
SDCBP-206ENST00000519115 KCNH5Q8NCM2 988 aa10.43□□□□□ -0.74
SDCBP-206ENST00000519115 GGNBP2Q9H3C7 697 aa10.43□□□□□ -0.74
SDCBP-206ENST00000519115 ARHGEF25Q86VW2 580 aa10.42□□□□□ -0.74
SDCBP-206ENST00000519115 COG3Q96JB2 828 aa10.42□□□□□ -0.74
SDCBP-206ENST00000519115 ABCC6O95255 1503 aa10.42□□□□□ -0.74
SDCBP-206ENST00000519115 THSD7AQ9UPZ6 1657 aa10.41□□□□□ -0.74
SDCBP-206ENST00000519115 SPATA31A5Q5VU36 1347 aa10.41□□□□□ -0.74
SDCBP-206ENST00000519115 SPATA31A7Q8IWB4 1347 aa10.41□□□□□ -0.74
SDCBP-206ENST00000519115 A0A0G2JS52 829 aa10.41□□□□□ -0.74
SDCBP-206ENST00000519115 FYB1O15117 783 aa10.41□□□□□ -0.74
SDCBP-206ENST00000519115 FBLN1P23142 703 aa10.41□□□□□ -0.74
SDCBP-206ENST00000519115 EVA1CP58658 441 aa10.41□□□□□ -0.74
SDCBP-206ENST00000519115 MYT1Q01538 1121 aa10.41□□□□□ -0.74
SDCBP-206ENST00000519115 LARP1Q6PKG0 1096 aaKnown RBP10.41□□□□□ -0.74
SDCBP-206ENST00000519115 USP35Q9P2H5 1018 aa10.41□□□□□ -0.74
SDCBP-206ENST00000519115 MAP2P11137 1827 aaKnown RBP10.41□□□□□ -0.74
SDCBP-206ENST00000519115 RGPD2P0DJD1 1756 aa10.41□□□□□ -0.74
SDCBP-206ENST00000519115 SPATA31A1Q5TZJ5 1347 aa10.4□□□□□ -0.74
SDCBP-206ENST00000519115 WASHC2AQ641Q2 1341 aa10.4□□□□□ -0.74
SDCBP-206ENST00000519115 FAM98CQ17RN3 349 aaKnown RBP10.4□□□□□ -0.74
SDCBP-206ENST00000519115 PANK3Q9H999 370 aa10.4□□□□□ -0.74
SDCBP-206ENST00000519115 AXIN2Q9Y2T1 843 aa10.4□□□□□ -0.74
SDCBP-206ENST00000519115 PEAK1Q9H792 1746 aa10.4□□□□□ -0.74
SDCBP-206ENST00000519115 CCDC7Q96M83 1385 aa10.39□□□□□ -0.75
SDCBP-206ENST00000519115 CGNL1Q0VF96 1302 aa10.39□□□□□ -0.75
SDCBP-206ENST00000519115 SEPT12Q8IYM1 358 aa10.39□□□□□ -0.75
SDCBP-206ENST00000519115 MAP3K19Q56UN5 1328 aa10.38□□□□□ -0.75
SDCBP-206ENST00000519115 FAM208AQ9UK61 1670 aaKnown RBP10.38□□□□□ -0.75
SDCBP-206ENST00000519115 RRS1Q15050 365 aaKnown RBP10.38□□□□□ -0.75
SDCBP-206ENST00000519115 CRB1P82279 1406 aa10.38□□□□□ -0.75
SDCBP-206ENST00000519115 PARP4Q9UKK3 1724 aaKnown RBP10.38□□□□□ -0.75
SDCBP-206ENST00000519115 WDR17Q8IZU2 1322 aa10.37□□□□□ -0.75
SDCBP-206ENST00000519115 CSB-PGBD3P0DP91 1061 aa10.37□□□□□ -0.75
SDCBP-206ENST00000519115 TOM1L2Q6ZVM7 507 aa10.37□□□□□ -0.75
SDCBP-206ENST00000519115 EP400Q96L91 3159 aa10.37□□□□□ -0.75
SDCBP-206ENST00000519115 LRRC37A3O60309 1634 aa10.36□□□□□ -0.75
SDCBP-206ENST00000519115 TCP11L2Q8N4U5 519 aa10.36□□□□□ -0.75
SDCBP-206ENST00000519115 ERBB3P21860 1342 aa10.35□□□□□ -0.75
SDCBP-206ENST00000519115 BLMP54132 1417 aaPredicted RBP10.35□□□□□ -0.75
SDCBP-206ENST00000519115 ONECUT3O60422 494 aaPredicted RBP10.35□□□□□ -0.75
SDCBP-206ENST00000519115 TNNT2P45379 298 aaPredicted RBP10.35□□□□□ -0.75
SDCBP-206ENST00000519115 AMPHP49418 695 aa10.35□□□□□ -0.75
SDCBP-206ENST00000519115 DDX10Q13206 875 aaKnown RBP10.35□□□□□ -0.75
SDCBP-206ENST00000519115 ANKRD24Q8TF21 1146 aa10.35□□□□□ -0.75
SDCBP-206ENST00000519115 LTV1Q96GA3 475 aaPredicted RBP10.35□□□□□ -0.75
SDCBP-206ENST00000519115 HOXC9P31274 260 aa10.34□□□□□ -0.75
SDCBP-206ENST00000519115 KRT27Q7Z3Y8 459 aa10.34□□□□□ -0.75
SDCBP-206ENST00000519115 IP6K1Q92551 441 aa10.34□□□□□ -0.75
SDCBP-206ENST00000519115 NLRP2Q9NX02 1062 aa10.34□□□□□ -0.75
SDCBP-206ENST00000519115 KNSTRNQ9Y448 316 aa10.34□□□□□ -0.75
SDCBP-206ENST00000519115 EMILIN1Q9Y6C2 1016 aa10.34□□□□□ -0.75
SDCBP-206ENST00000519115 U3KPZ7 1027 aaPredicted RBP10.34□□□□□ -0.75
SDCBP-206ENST00000519115 RTL1A6NKG5 1358 aa10.34□□□□□ -0.75
SDCBP-206ENST00000519115 FAM182BQ5T319 152 aa10.33□□□□□ -0.76
SDCBP-206ENST00000519115 BARGINQ6ZT62 677 aa10.33□□□□□ -0.76
SDCBP-206ENST00000519115 UPF1Q92900 1129 aaKnown RBP eCLIP10.33□□□□□ -0.76
SDCBP-206ENST00000519115 NSD2O96028 1365 aa10.33□□□□□ -0.76
SDCBP-206ENST00000519115 KAT6BQ8WYB5 2073 aa10.33□□□□□ -0.76
SDCBP-206ENST00000519115 FLT4P35916 1363 aa10.32□□□□□ -0.76
SDCBP-206ENST00000519115 CCER2I3L3R5 266 aa10.32□□□□□ -0.76
SDCBP-206ENST00000519115 PPM1GO15355 546 aaPredicted RBP10.32□□□□□ -0.76
SDCBP-206ENST00000519115 CARD10Q9BWT7 1032 aa10.32□□□□□ -0.76
SDCBP-206ENST00000519115 THRAP3Q9Y2W1 955 aaKnown RBP10.32□□□□□ -0.76
SDCBP-206ENST00000519115 DISP2A7MBM2 1401 aa10.32□□□□□ -0.76
SDCBP-206ENST00000519115 SBF2Q86WG5 1849 aa10.31□□□□□ -0.76
SDCBP-206ENST00000519115 RGPD1P0DJD0 1748 aa10.31□□□□□ -0.76
SDCBP-206ENST00000519115 TNS1Q9HBL0 1735 aaKnown RBP10.31□□□□□ -0.76
SDCBP-206ENST00000519115 ANP32CO43423 234 aa10.31□□□□□ -0.76
SDCBP-206ENST00000519115 CNGB1Q14028 1251 aaPredicted RBP10.31□□□□□ -0.76
SDCBP-206ENST00000519115 HSP90AB2PQ58FF8 381 aa10.31□□□□□ -0.76
SDCBP-206ENST00000519115 AMER1Q5JTC6 1135 aaPredicted RBP10.31□□□□□ -0.76
SDCBP-206ENST00000519115 FOXD4L1Q9NU39 408 aa10.31□□□□□ -0.76
SDCBP-206ENST00000519115 SMG6Q86US8 1419 aaKnown RBP10.31□□□□□ -0.76
SDCBP-206ENST00000519115 INSRP06213 1382 aa10.3□□□□□ -0.76
SDCBP-206ENST00000519115 CC2D1BQ5T0F9 858 aaKnown RBP10.3□□□□□ -0.76
SDCBP-206ENST00000519115 MORC1Q86VD1 984 aa10.3□□□□□ -0.76
SDCBP-206ENST00000519115 SHANK3Q9BYB0 1731 aa10.3□□□□□ -0.76
SDCBP-206ENST00000519115 KIF24Q5T7B8 1368 aa10.29□□□□□ -0.76
SDCBP-206ENST00000519115 ZBTB22O15209 634 aa10.29□□□□□ -0.76
SDCBP-206ENST00000519115 PER1O15534 1290 aaPredicted RBP10.29□□□□□ -0.76
SDCBP-206ENST00000519115 PDE3BQ13370 1112 aa10.29□□□□□ -0.76
SDCBP-206ENST00000519115 USHBP1Q8N6Y0 703 aa10.29□□□□□ -0.76
SDCBP-206ENST00000519115 POLKQ9UBT6 870 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms