RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 RGPD3A6NKT7 1758 aaPredicted RBP27.32■■□□□ 1.96
CTNNA1-213ENST00000519113 RGPD4Q7Z3J3 1758 aa27.32■■□□□ 1.96
CTNNA1-213ENST00000519113 BCL9O00512 1426 aa27.32■■□□□ 1.96
CTNNA1-213ENST00000519113 KCNH5Q8NCM2 988 aa27.31■■□□□ 1.96
CTNNA1-213ENST00000519113 ZNF692Q9BU19 519 aaPredicted RBP27.31■■□□□ 1.96
CTNNA1-213ENST00000519113 LRRC37A3O60309 1634 aa27.3■■□□□ 1.96
CTNNA1-213ENST00000519113 PTF1AQ7RTS3 328 aa27.3■■□□□ 1.96
CTNNA1-213ENST00000519113 ARHGEF25Q86VW2 580 aa27.3■■□□□ 1.96
CTNNA1-213ENST00000519113 CSB-PGBD3P0DP91 1061 aa27.29■■□□□ 1.96
CTNNA1-213ENST00000519113 PROM2Q8N271 834 aa27.29■■□□□ 1.96
CTNNA1-213ENST00000519113 CARD10Q9BWT7 1032 aa27.29■■□□□ 1.96
CTNNA1-213ENST00000519113 CPSF1Q10570 1443 aaKnown RBP27.28■■□□□ 1.96
CTNNA1-213ENST00000519113 QRICH2Q9H0J4 1663 aa27.27■■□□□ 1.96
CTNNA1-213ENST00000519113 TTC21BQ7Z4L5 1316 aa27.26■■□□□ 1.95
CTNNA1-213ENST00000519113 SBF2Q86WG5 1849 aa27.26■■□□□ 1.95
CTNNA1-213ENST00000519113 EXOC5O00471 708 aa27.26■■□□□ 1.95
CTNNA1-213ENST00000519113 ZBTB7AO95365 584 aa27.25■■□□□ 1.95
CTNNA1-213ENST00000519113 STK32BQ9NY57 414 aa27.25■■□□□ 1.95
CTNNA1-213ENST00000519113 COL18A1P39060 1754 aa27.25■■□□□ 1.95
CTNNA1-213ENST00000519113 TXNRD1Q16881 649 aa27.24■■□□□ 1.95
CTNNA1-213ENST00000519113 PDGFDQ9GZP0 370 aaPredicted RBP27.24■■□□□ 1.95
CTNNA1-213ENST00000519113 PIK3C2AO00443 1686 aa27.24■■□□□ 1.95
CTNNA1-213ENST00000519113 TTC21AQ8NDW8 1320 aa27.23■■□□□ 1.95
CTNNA1-213ENST00000519113 SOX12O15370 315 aa27.23■■□□□ 1.95
CTNNA1-213ENST00000519113 ATF5Q9Y2D1 282 aaPredicted RBP27.21■■□□□ 1.95
CTNNA1-213ENST00000519113 CASZ1Q86V15 1759 aa27.21■■□□□ 1.95
CTNNA1-213ENST00000519113 PTGER2P43116 358 aa27.2■■□□□ 1.94
CTNNA1-213ENST00000519113 SLC15A2Q16348 729 aa27.2■■□□□ 1.94
CTNNA1-213ENST00000519113 L3MBTL2Q969R5 705 aa27.2■■□□□ 1.94
CTNNA1-213ENST00000519113 CCDC7Q96M83 1385 aa27.2■■□□□ 1.94
CTNNA1-213ENST00000519113 TRIM26Q12899 539 aaPredicted RBP27.17■■□□□ 1.94
CTNNA1-213ENST00000519113 WNK3Q9BYP7 1800 aa27.16■■□□□ 1.94
CTNNA1-213ENST00000519113 TRPM1Q7Z4N2 1603 aa27.16■■□□□ 1.94
CTNNA1-213ENST00000519113 AKAP12Q02952 1782 aa27.15■■□□□ 1.94
CTNNA1-213ENST00000519113 MTFR1LQ9H019 292 aa27.15■■□□□ 1.94
CTNNA1-213ENST00000519113 KTN1Q86UP2 1357 aaKnown RBP27.14■■□□□ 1.94
CTNNA1-213ENST00000519113 ROCK2O75116 1388 aaKnown RBP27.13■■□□□ 1.93
CTNNA1-213ENST00000519113 SYT17Q9BSW7 474 aa27.13■■□□□ 1.93
CTNNA1-213ENST00000519113 FHDC1Q9C0D6 1143 aaPredicted RBP27.13■■□□□ 1.93
CTNNA1-213ENST00000519113 TNS2Q63HR2 1409 aa27.13■■□□□ 1.93
CTNNA1-213ENST00000519113 UTRNP46939 3433 aa27.12■■□□□ 1.93
CTNNA1-213ENST00000519113 NFAT5O94916 1531 aa27.11■■□□□ 1.93
CTNNA1-213ENST00000519113 ABCC6O95255 1503 aa27.11■■□□□ 1.93
CTNNA1-213ENST00000519113 MYOM1P52179 1685 aa27.09■■□□□ 1.93
CTNNA1-213ENST00000519113 PCGF6Q9BYE7 350 aa27.09■■□□□ 1.93
CTNNA1-213ENST00000519113 NLRP2Q9NX02 1062 aa27.09■■□□□ 1.93
CTNNA1-213ENST00000519113 RGPD5Q99666 1765 aa27.08■■□□□ 1.93
CTNNA1-213ENST00000519113 ZNF784Q8NCA9 323 aaPredicted RBP27.08■■□□□ 1.93
CTNNA1-213ENST00000519113 ACSBG1Q96GR2 724 aa27.08■■□□□ 1.93
CTNNA1-213ENST00000519113 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.07■■□□□ 1.921e-6■■□□□ 12.4
CTNNA1-213ENST00000519113 SGIP1Q9BQI5 828 aa27.07■■□□□ 1.92
CTNNA1-213ENST00000519113 ERBB3P21860 1342 aa27.07■■□□□ 1.92
CTNNA1-213ENST00000519113 IL2RBP14784 551 aa27.06■■□□□ 1.92
CTNNA1-213ENST00000519113 USP31Q70CQ4 1352 aa27.06■■□□□ 1.92
CTNNA1-213ENST00000519113 ARXQ96QS3 562 aa27.05■■□□□ 1.92
CTNNA1-213ENST00000519113 SIN3AQ96ST3 1273 aa27.03■■□□□ 1.92
CTNNA1-213ENST00000519113 NHSQ6T4R5 1651 aa27.01■■□□□ 1.92
CTNNA1-213ENST00000519113 NME9Q86XW9 330 aa27.01■■□□□ 1.91
CTNNA1-213ENST00000519113 NEUROD1Q13562 356 aa27■■□□□ 1.91
CTNNA1-213ENST00000519113 ANKRD24Q8TF21 1146 aa27■■□□□ 1.91
CTNNA1-213ENST00000519113 HDGFL2Q7Z4V5 671 aaPredicted RBP26.99■■□□□ 1.91
CTNNA1-213ENST00000519113 MAP3K5Q99683 1374 aa26.98■■□□□ 1.91
CTNNA1-213ENST00000519113 SBNO2Q9Y2G9 1366 aa26.98■■□□□ 1.91
CTNNA1-213ENST00000519113 TMC1Q8TDI8 760 aa26.97■■□□□ 1.91
CTNNA1-213ENST00000519113 ZNF827Q17R98 1081 aa26.96■■□□□ 1.91
CTNNA1-213ENST00000519113 MON2Q7Z3U7 1717 aa26.96■■□□□ 1.91
CTNNA1-213ENST00000519113 SLC16A10Q8TF71 515 aa26.95■■□□□ 1.9
CTNNA1-213ENST00000519113 LRRC4BQ9NT99 713 aa26.95■■□□□ 1.9
CTNNA1-213ENST00000519113 SLC27A3Q5K4L6 730 aa26.94■■□□□ 1.9
CTNNA1-213ENST00000519113 PAPPAQ13219 1627 aa26.94■■□□□ 1.9
CTNNA1-213ENST00000519113 TERF2IPQ9NYB0 399 aa26.93■■□□□ 1.9
CTNNA1-213ENST00000519113 CD163L1Q9NR16 1453 aa26.93■■□□□ 1.9
CTNNA1-213ENST00000519113 GPR162Q16538 588 aa26.92■■□□□ 1.9
CTNNA1-213ENST00000519113 SLC12A5Q9H2X9 1139 aa26.92■■□□□ 1.9
CTNNA1-213ENST00000519113 USP54Q70EL1 1684 aa26.92■■□□□ 1.9
CTNNA1-213ENST00000519113 EDC4Q6P2E9 1401 aaKnown RBP26.91■■□□□ 1.9
CTNNA1-213ENST00000519113 POLD1P28340 1107 aa26.91■■□□□ 1.9
CTNNA1-213ENST00000519113 DDX54Q8TDD1 881 aaKnown RBP26.91■■□□□ 1.9
CTNNA1-213ENST00000519113 AKT1S1Q96B36 256 aa26.91■■□□□ 1.9
CTNNA1-213ENST00000519113 CARD11Q9BXL7 1154 aa26.91■■□□□ 1.9
CTNNA1-213ENST00000519113 IP6K1Q92551 441 aa26.9■■□□□ 1.9
CTNNA1-213ENST00000519113 BTAF1O14981 1849 aa26.9■■□□□ 1.9
CTNNA1-213ENST00000519113 C1QTNF8P60827 252 aa26.88■■□□□ 1.89
CTNNA1-213ENST00000519113 LTN1O94822 1766 aa26.87■■□□□ 1.89
CTNNA1-213ENST00000519113 CHD4Q14839 1912 aa26.86■■□□□ 1.89
CTNNA1-213ENST00000519113 SENP3-EIF4A1A0A087X0R7 540 aa26.86■■□□□ 1.89
CTNNA1-213ENST00000519113 PUS7Q96PZ0 661 aaKnown RBP26.86■■□□□ 1.89
CTNNA1-213ENST00000519113 TFCP2L1Q9NZI6 479 aa26.86■■□□□ 1.89
CTNNA1-213ENST00000519113 KAT6BQ8WYB5 2073 aa26.85■■□□□ 1.89
CTNNA1-213ENST00000519113 KLHL34Q8N239 644 aa26.85■■□□□ 1.89
CTNNA1-213ENST00000519113 LTV1Q96GA3 475 aaPredicted RBP26.85■■□□□ 1.89
CTNNA1-213ENST00000519113 SYTL4Q96C24 671 aaPredicted RBP26.84■■□□□ 1.89
CTNNA1-213ENST00000519113 GOLGB1Q14789 3259 aaKnown RBP26.84■■□□□ 1.89
CTNNA1-213ENST00000519113 A0A1W2PP64 1363 aa26.84■■□□□ 1.89
CTNNA1-213ENST00000519113 PNPLA7Q6ZV29 1317 aa26.83■■□□□ 1.89
CTNNA1-213ENST00000519113 PRIM1P49642 420 aaKnown RBP26.82■■□□□ 1.88
CTNNA1-213ENST00000519113 ANKRD36BQ8N2N9 1353 aa26.81■■□□□ 1.88
CTNNA1-213ENST00000519113 PELP1Q8IZL8 1130 aaKnown RBP26.8■■□□□ 1.88
CTNNA1-213ENST00000519113 ZCRB1Q8TBF4 217 aaKnown RBP26.79■■□□□ 1.88
CTNNA1-213ENST00000519113 COG3Q96JB2 828 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms