RNA–Protein interactions for RNA: ENST00000518963.5

PSD3-208, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

TSL 2

Gene PSD3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-208ENST00000518963 TRIM47Q96LD4 638 aa7.64□□□□□ -1.19
PSD3-208ENST00000518963 SENP2Q9HC62 589 aa7.64□□□□□ -1.19
PSD3-208ENST00000518963 TERTO14746 1132 aaKnown RBP7.63□□□□□ -1.19
PSD3-208ENST00000518963 SNRPBP14678 240 aaKnown RBP7.63□□□□□ -1.19
PSD3-208ENST00000518963 SKOR1P84550 965 aa7.63□□□□□ -1.19
PSD3-208ENST00000518963 TRIM32Q13049 653 aa7.63□□□□□ -1.19
PSD3-208ENST00000518963 NBPF14Q5TI25 921 aa7.63□□□□□ -1.19
PSD3-208ENST00000518963 SH3RF1Q7Z6J0 888 aa7.63□□□□□ -1.19
PSD3-208ENST00000518963 PTK2Q05397 1052 aa7.62□□□□□ -1.19
PSD3-208ENST00000518963 ADAM32Q8TC27 787 aa7.62□□□□□ -1.19
PSD3-208ENST00000518963 GPKOWQ92917 476 aaPredicted RBP eCLIP7.62□□□□□ -1.19
PSD3-208ENST00000518963 CALR3Q96L12 384 aaKnown RBP7.62□□□□□ -1.19
PSD3-208ENST00000518963 ARHGAP9Q9BRR9 750 aa7.62□□□□□ -1.19
PSD3-208ENST00000518963 CARD14Q9BXL6 1004 aa7.62□□□□□ -1.19
PSD3-208ENST00000518963 MAGEB6P1A0A0J9YX57 407 aa7.61□□□□□ -1.19
PSD3-208ENST00000518963 GPSM3Q9Y4H4 160 aa7.61□□□□□ -1.19
PSD3-208ENST00000518963 J3QL48 77 aa7.6□□□□□ -1.19
PSD3-208ENST00000518963 MRGPRX2Q96LB1 330 aa7.6□□□□□ -1.19
PSD3-208ENST00000518963 UCN2Q96RP3 112 aa7.6□□□□□ -1.19
PSD3-208ENST00000518963 EIF4G2P78344 907 aaKnown RBP eCLIP7.59□□□□□ -1.19
PSD3-208ENST00000518963 AGERQ15109 404 aa7.59□□□□□ -1.19
PSD3-208ENST00000518963 KIFC2Q96AC6 838 aa7.59□□□□□ -1.19
PSD3-208ENST00000518963 PIK3CDO00329 1044 aa7.58□□□□□ -1.2
PSD3-208ENST00000518963 SEMA3FQ13275 785 aa7.58□□□□□ -1.2
PSD3-208ENST00000518963 ERFEQ4G0M1 354 aa7.58□□□□□ -1.2
PSD3-208ENST00000518963 ZBTB33Q86T24 672 aa7.58□□□□□ -1.2
PSD3-208ENST00000518963 BPHLQ86WA6 291 aaPredicted RBP7.58□□□□□ -1.2
PSD3-208ENST00000518963 PCDHB9Q9Y5E1 797 aa7.58□□□□□ -1.2
PSD3-208ENST00000518963 HPS1Q92902 700 aa7.57□□□□□ -1.2
PSD3-208ENST00000518963 SOX11P35716 441 aa7.56□□□□□ -1.2
PSD3-208ENST00000518963 C1QTNF2Q9BXJ5 285 aa7.56□□□□□ -1.2
PSD3-208ENST00000518963 CEP126Q9P2H0 1117 aa7.56□□□□□ -1.2
PSD3-208ENST00000518963 WNT7BP56706 349 aa7.55□□□□□ -1.2
PSD3-208ENST00000518963 TSGA10IPQ3SY00 556 aa7.55□□□□□ -1.2
PSD3-208ENST00000518963 CFAP70Q5T0N1 1121 aa7.55□□□□□ -1.2
PSD3-208ENST00000518963 RC3H1Q5TC82 1133 aaKnown RBP7.55□□□□□ -1.2
PSD3-208ENST00000518963 TBC1D9Q6ZT07 1266 aa7.55□□□□□ -1.2
PSD3-208ENST00000518963 FAM174AQ8TBP5 190 aa7.55□□□□□ -1.2
PSD3-208ENST00000518963 CCDC97Q96F63 343 aaPredicted RBP7.55□□□□□ -1.2
PSD3-208ENST00000518963 SERPINA10Q9UK55 444 aa7.55□□□□□ -1.2
PSD3-208ENST00000518963 PALM3A6NDB9 673 aaPredicted RBP7.54□□□□□ -1.2
PSD3-208ENST00000518963 DZIP3Q86Y13 1208 aaKnown RBP7.54□□□□□ -1.2
PSD3-208ENST00000518963 PHTF2Q8N3S3 785 aa7.54□□□□□ -1.2
PSD3-208ENST00000518963 PPP1R12CQ9BZL4 782 aa7.54□□□□□ -1.2
PSD3-208ENST00000518963 TFIP11Q9UBB9 837 aaKnown RBP7.54□□□□□ -1.2
PSD3-208ENST00000518963 GIGYF1O75420 1035 aaPredicted RBP7.53□□□□□ -1.2
PSD3-208ENST00000518963 EHBP1Q8NDI1 1231 aa7.53□□□□□ -1.2
PSD3-208ENST00000518963 FAM181BA6NEQ2 426 aa7.52□□□□□ -1.21
PSD3-208ENST00000518963 SIAH2O43255 324 aa7.52□□□□□ -1.21
PSD3-208ENST00000518963 RFX1P22670 979 aa7.52□□□□□ -1.21
PSD3-208ENST00000518963 VARSP26640 1264 aaKnown RBP7.52□□□□□ -1.21
PSD3-208ENST00000518963 NPAS3Q8IXF0 933 aa7.52□□□□□ -1.21
PSD3-208ENST00000518963 TRMT44Q8IYL2 757 aaKnown RBP7.52□□□□□ -1.21
PSD3-208ENST00000518963 SLC16A10Q8TF71 515 aa7.52□□□□□ -1.21
PSD3-208ENST00000518963 TLL2Q9Y6L7 1015 aa7.52□□□□□ -1.21
PSD3-208ENST00000518963 SLC10A4Q96EP9 437 aa7.51□□□□□ -1.21
PSD3-208ENST00000518963 NXF1Q9UBU9 619 aaKnown RBP7.51□□□□□ -1.21
PSD3-208ENST00000518963 LORP23490 312 aaPredicted RBP7.5□□□□□ -1.21
PSD3-208ENST00000518963 DEPDC4Q8N2C3 294 aa7.5□□□□□ -1.21
PSD3-208ENST00000518963 CCDC85AQ96PX6 553 aaPredicted RBP7.5□□□□□ -1.21
PSD3-208ENST00000518963 MAFBQ9Y5Q3 323 aaPredicted RBP7.5□□□□□ -1.21
PSD3-208ENST00000518963 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.49□□□□□ -1.21
PSD3-208ENST00000518963 SKIP12755 728 aa7.49□□□□□ -1.21
PSD3-208ENST00000518963 LMOD1P29536 600 aaPredicted RBP7.49□□□□□ -1.21
PSD3-208ENST00000518963 GRM5P41594 1212 aa7.49□□□□□ -1.21
PSD3-208ENST00000518963 SRPK2P78362 688 aaKnown RBP7.49□□□□□ -1.21
PSD3-208ENST00000518963 ARID5BQ14865 1188 aa7.49□□□□□ -1.21
PSD3-208ENST00000518963 ESPNB1AK53 854 aa7.48□□□□□ -1.21
PSD3-208ENST00000518963 ATP9BO43861 1147 aa7.48□□□□□ -1.21
PSD3-208ENST00000518963 RAB15P59190 212 aa7.48□□□□□ -1.21
PSD3-208ENST00000518963 MCCD1P59942 119 aaPredicted RBP7.48□□□□□ -1.21
PSD3-208ENST00000518963 SLFNL1Q499Z3 407 aa7.48□□□□□ -1.21
PSD3-208ENST00000518963 VASH1Q7L8A9 365 aaPredicted RBP7.48□□□□□ -1.21
PSD3-208ENST00000518963 RNF135Q8IUD6 432 aa7.48□□□□□ -1.21
PSD3-208ENST00000518963 KCTD15Q96SI1 283 aaPredicted RBP7.48□□□□□ -1.21
PSD3-208ENST00000518963 CHIC2Q9UKJ5 165 aa7.48□□□□□ -1.21
PSD3-208ENST00000518963 USP17L5A8MUK1 530 aa7.47□□□□□ -1.21
PSD3-208ENST00000518963 ALDH1A1P00352 501 aa7.47□□□□□ -1.21
PSD3-208ENST00000518963 GMPRP36959 345 aa7.47□□□□□ -1.21
PSD3-208ENST00000518963 CDCA8Q53HL2 280 aa7.47□□□□□ -1.21
PSD3-208ENST00000518963 IRF7Q92985 503 aa7.47□□□□□ -1.21
PSD3-208ENST00000518963 CDK15Q96Q40 435 aa7.47□□□□□ -1.21
PSD3-208ENST00000518963 CDCA7Q9BWT1 371 aaPredicted RBP7.47□□□□□ -1.21
PSD3-208ENST00000518963 NBPF20Q3BBV1 942 aa7.46□□□□□ -1.22
PSD3-208ENST00000518963 INTS6LQ5JSJ4 861 aaKnown RBP7.46□□□□□ -1.22
PSD3-208ENST00000518963 KANK4Q5T7N3 995 aaPredicted RBP7.46□□□□□ -1.22
PSD3-208ENST00000518963 ZSCAN1Q8NBB4 408 aa7.46□□□□□ -1.22
PSD3-208ENST00000518963 PLPP7Q8NBV4 271 aa7.46□□□□□ -1.22
PSD3-208ENST00000518963 NFATC2IPQ8NCF5 419 aa7.46□□□□□ -1.22
PSD3-208ENST00000518963 MAP4K5Q9Y4K4 846 aa7.46□□□□□ -1.22
PSD3-208ENST00000518963 USP17L3A6NCW0 530 aa7.45□□□□□ -1.22
PSD3-208ENST00000518963 USP17L4A6NCW7 530 aa7.45□□□□□ -1.22
PSD3-208ENST00000518963 NR3C2P08235 984 aa7.45□□□□□ -1.22
PSD3-208ENST00000518963 FSHRP23945 695 aa7.45□□□□□ -1.22
PSD3-208ENST00000518963 NCOA4Q13772 614 aa7.45□□□□□ -1.22
PSD3-208ENST00000518963 USP17L2Q6R6M4 530 aa7.45□□□□□ -1.22
PSD3-208ENST00000518963 USP17L1Q7RTZ2 530 aa7.45□□□□□ -1.22
PSD3-208ENST00000518963 TRIM46Q7Z4K8 759 aa7.45□□□□□ -1.22
PSD3-208ENST00000518963 LOC100996750A0A140TA64 210 aa7.44□□□□□ -1.22
PSD3-208ENST00000518963 H3BM21 787 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms