RNA–Protein interactions for RNA: ENST00000518711.1

SPIDR-208, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-208ENST00000518711 TXNRD1Q16881 649 aa8.41□□□□□ -1.06
SPIDR-208ENST00000518711 RGL3Q3MIN7 710 aa8.41□□□□□ -1.06
SPIDR-208ENST00000518711 LMOD2Q6P5Q4 547 aa8.41□□□□□ -1.06
SPIDR-208ENST00000518711 PMFBP1Q8TBY8 1022 aa8.4□□□□□ -1.06
SPIDR-208ENST00000518711 PRAM1Q96QH2 718 aa8.4□□□□□ -1.06
SPIDR-208ENST00000518711 THRAP3Q9Y2W1 955 aaKnown RBP8.4□□□□□ -1.06
SPIDR-208ENST00000518711 ARHGEF28Q8N1W1 1705 aaKnown RBP8.4□□□□□ -1.07
SPIDR-208ENST00000518711 PRPF38BQ5VTL8 546 aaKnown RBP8.39□□□□□ -1.07
SPIDR-208ENST00000518711 SLC16A10Q8TF71 515 aa8.39□□□□□ -1.07
SPIDR-208ENST00000518711 MPHOSPH9Q99550 1183 aa8.39□□□□□ -1.07
SPIDR-208ENST00000518711 PRDM11Q9NQV5 511 aa8.39□□□□□ -1.07
SPIDR-208ENST00000518711 POGKQ9P215 609 aa8.39□□□□□ -1.07
SPIDR-208ENST00000518711 TULP4Q9NRJ4 1543 aa8.39□□□□□ -1.07
SPIDR-208ENST00000518711 ABCA3Q99758 1704 aa8.38□□□□□ -1.07
SPIDR-208ENST00000518711 IFT172Q9UG01 1749 aa8.38□□□□□ -1.07
SPIDR-208ENST00000518711 WASLO00401 505 aaPredicted RBP8.38□□□□□ -1.07
SPIDR-208ENST00000518711 PTF1AQ7RTS3 328 aa8.38□□□□□ -1.07
SPIDR-208ENST00000518711 CFAP44Q96MT7 982 aa8.38□□□□□ -1.07
SPIDR-208ENST00000518711 USP35Q9P2H5 1018 aa8.38□□□□□ -1.07
SPIDR-208ENST00000518711 RGPD8O14715 1765 aaPredicted RBP8.38□□□□□ -1.07
SPIDR-208ENST00000518711 ALS2Q96Q42 1657 aa8.37□□□□□ -1.07
SPIDR-208ENST00000518711 LBX1P52954 281 aa8.37□□□□□ -1.07
SPIDR-208ENST00000518711 CFAP70Q5T0N1 1121 aa8.37□□□□□ -1.07
SPIDR-208ENST00000518711 AIDAQ96BJ3 306 aa8.37□□□□□ -1.07
SPIDR-208ENST00000518711 TRPM3Q9HCF6 1732 aaPredicted RBP8.37□□□□□ -1.07
SPIDR-208ENST00000518711 PITPNM2Q9BZ72 1349 aa8.36□□□□□ -1.07
SPIDR-208ENST00000518711 TCP11L2Q8N4U5 519 aa8.36□□□□□ -1.07
SPIDR-208ENST00000518711 NGDNQ8NEJ9 315 aaKnown RBP8.36□□□□□ -1.07
SPIDR-208ENST00000518711 BRD4O60885 1362 aaPredicted RBP8.35□□□□□ -1.07
SPIDR-208ENST00000518711 CPDO75976 1380 aa8.35□□□□□ -1.07
SPIDR-208ENST00000518711 SMC1BQ8NDV3 1235 aa8.35□□□□□ -1.07
SPIDR-208ENST00000518711 KIAA0232Q92628 1395 aa8.35□□□□□ -1.07
SPIDR-208ENST00000518711 PRR36Q9H6K5 1346 aa8.34□□□□□ -1.07
SPIDR-208ENST00000518711 ATP7BP35670 1465 aa8.34□□□□□ -1.07
SPIDR-208ENST00000518711 PLEKHG3A1L390 1219 aa8.34□□□□□ -1.07
SPIDR-208ENST00000518711 EVA1CP58658 441 aa8.34□□□□□ -1.07
SPIDR-208ENST00000518711 STRN4Q9NRL3 753 aa8.34□□□□□ -1.07
SPIDR-208ENST00000518711 BCL9O00512 1426 aa8.34□□□□□ -1.07
SPIDR-208ENST00000518711 POLR3AO14802 1390 aaPredicted RBP8.34□□□□□ -1.07
SPIDR-208ENST00000518711 TNRC18O15417 2968 aaPredicted RBP8.33□□□□□ -1.08
SPIDR-208ENST00000518711 OVOS2A0A0G2JMS6 1433 aa8.33□□□□□ -1.08
SPIDR-208ENST00000518711 OVOS2A0A0J9YW53 1432 aa8.33□□□□□ -1.08
SPIDR-208ENST00000518711 ADGRB1O14514 1584 aa8.33□□□□□ -1.08
SPIDR-208ENST00000518711 OVOS2Q6IE36 1432 aa8.33□□□□□ -1.08
SPIDR-208ENST00000518711 SSH2Q76I76 1423 aa8.33□□□□□ -1.08
SPIDR-208ENST00000518711 CDCA7Q9BWT1 371 aaPredicted RBP8.33□□□□□ -1.08
SPIDR-208ENST00000518711 CCDC61Q9Y6R9 512 aa8.33□□□□□ -1.08
SPIDR-208ENST00000518711 PAK3O75914 559 aaPredicted RBP8.32□□□□□ -1.08
SPIDR-208ENST00000518711 SAFB2Q14151 953 aaKnown RBP eCLIP8.32□□□□□ -1.08
SPIDR-208ENST00000518711 NUDT16Q96DE0 195 aaKnown RBP8.32□□□□□ -1.08
SPIDR-208ENST00000518711 CRYBG1Q9Y4K1 1723 aa8.32□□□□□ -1.08
SPIDR-208ENST00000518711 NLRP13Q86W25 1043 aa8.31□□□□□ -1.08
SPIDR-208ENST00000518711 GCC1Q96CN9 775 aa8.31□□□□□ -1.08
SPIDR-208ENST00000518711 CD2APQ9Y5K6 639 aa8.31□□□□□ -1.08
SPIDR-208ENST00000518711 ZC3H6P61129 1189 aaKnown RBP8.3□□□□□ -1.08
SPIDR-208ENST00000518711 CHRNA2Q15822 529 aa8.3□□□□□ -1.08
SPIDR-208ENST00000518711 ZNF827Q17R98 1081 aa8.3□□□□□ -1.08
SPIDR-208ENST00000518711 LARP1Q6PKG0 1096 aaKnown RBP8.3□□□□□ -1.08
SPIDR-208ENST00000518711 HIRIP3Q9BW71 556 aaPredicted RBP8.3□□□□□ -1.08
SPIDR-208ENST00000518711 MKRN1Q9UHC7 482 aaKnown RBP8.3□□□□□ -1.08
SPIDR-208ENST00000518711 TRAK1Q9UPV9 953 aa8.3□□□□□ -1.08
SPIDR-208ENST00000518711 MINK1Q8N4C8 1332 aaPredicted RBP8.29□□□□□ -1.08
SPIDR-208ENST00000518711 GCP02774 474 aa8.29□□□□□ -1.08
SPIDR-208ENST00000518711 MPNDQ8N594 471 aa8.29□□□□□ -1.08
SPIDR-208ENST00000518711 ABTB2Q8N961 1025 aa8.29□□□□□ -1.08
SPIDR-208ENST00000518711 TOPAZ1Q8N9V7 1692 aa8.28□□□□□ -1.08
SPIDR-208ENST00000518711 HSPA8P11142 646 aaKnown RBP8.28□□□□□ -1.08
SPIDR-208ENST00000518711 PPARGC1BQ86YN6 1023 aaKnown RBP8.28□□□□□ -1.08
SPIDR-208ENST00000518711 CDK19Q9BWU1 502 aa8.28□□□□□ -1.08
SPIDR-208ENST00000518711 WBP1LQ9NX94 342 aa8.28□□□□□ -1.08
SPIDR-208ENST00000518711 COL24A1Q17RW2 1714 aa8.28□□□□□ -1.08
SPIDR-208ENST00000518711 CRB1P82279 1406 aa8.28□□□□□ -1.08
SPIDR-208ENST00000518711 ACEP12821 1306 aa8.28□□□□□ -1.08
SPIDR-208ENST00000518711 SBF2Q86WG5 1849 aa8.27□□□□□ -1.09
SPIDR-208ENST00000518711 ITSN1Q15811 1721 aa8.27□□□□□ -1.09
SPIDR-208ENST00000518711 PARP4Q9UKK3 1724 aaKnown RBP8.27□□□□□ -1.09
SPIDR-208ENST00000518711 DDB1Q16531 1140 aa8.27□□□□□ -1.09
SPIDR-208ENST00000518711 HABP4Q5JVS0 413 aaKnown RBP8.27□□□□□ -1.09
SPIDR-208ENST00000518711 RRAGCQ9HB90 399 aa8.27□□□□□ -1.09
SPIDR-208ENST00000518711 C10orf71Q711Q0 1435 aa8.27□□□□□ -1.09
SPIDR-208ENST00000518711 KDM2BQ8NHM5 1336 aa8.27□□□□□ -1.09
SPIDR-208ENST00000518711 PEAK1Q9H792 1746 aa8.26□□□□□ -1.09
SPIDR-208ENST00000518711 SLC17A8Q8NDX2 589 aa8.26□□□□□ -1.09
SPIDR-208ENST00000518711 LMO7Q8WWI1 1683 aa8.26□□□□□ -1.09
SPIDR-208ENST00000518711 COL5A2P05997 1499 aaPredicted RBP8.26□□□□□ -1.09
SPIDR-208ENST00000518711 DCAF11Q8TEB1 546 aa8.25□□□□□ -1.09
SPIDR-208ENST00000518711 PNPLA7Q6ZV29 1317 aa8.25□□□□□ -1.09
SPIDR-208ENST00000518711 AKT1S1Q96B36 256 aa8.24□□□□□ -1.09
SPIDR-208ENST00000518711 CARD10Q9BWT7 1032 aa8.24□□□□□ -1.09
SPIDR-208ENST00000518711 CREBZFQ9NS37 354 aa8.24□□□□□ -1.09
SPIDR-208ENST00000518711 PHRF1Q9P1Y6 1649 aaKnown RBP8.24□□□□□ -1.09
SPIDR-208ENST00000518711 PXDNLA1KZ92 1463 aa8.24□□□□□ -1.09
SPIDR-208ENST00000518711 WDR17Q8IZU2 1322 aa8.24□□□□□ -1.09
SPIDR-208ENST00000518711 IGSF1Q8N6C5 1336 aa8.24□□□□□ -1.09
SPIDR-208ENST00000518711 KAT6BQ8WYB5 2073 aa8.23□□□□□ -1.09
SPIDR-208ENST00000518711 MAPK8IP2Q13387 824 aaPredicted RBP8.23□□□□□ -1.09
SPIDR-208ENST00000518711 NUTM2GQ5VZR2 741 aa8.23□□□□□ -1.09
SPIDR-208ENST00000518711 MARCH10Q8NA82 808 aaPredicted RBP8.23□□□□□ -1.09
SPIDR-208ENST00000518711 KCNH5Q8NCM2 988 aa8.23□□□□□ -1.09
SPIDR-208ENST00000518711 ZNF692Q9BU19 519 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms