RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 ZSCAN1Q8NBB4 408 aa8.05□□□□□ -1.12
PABPC1-206ENST00000518293 BANK1Q8NDB2 785 aa8.05□□□□□ -1.12
PABPC1-206ENST00000518293 HMX1Q9NP08 348 aaPredicted RBP8.05□□□□□ -1.12
PABPC1-206ENST00000518293 ERBB4Q15303 1308 aa8.04□□□□□ -1.12
PABPC1-206ENST00000518293 BMP2P12643 396 aa8.04□□□□□ -1.12
PABPC1-206ENST00000518293 FSHRP23945 695 aa8.04□□□□□ -1.12
PABPC1-206ENST00000518293 VASH1Q7L8A9 365 aaPredicted RBP8.04□□□□□ -1.12
PABPC1-206ENST00000518293 C1QTNF2Q9BXJ5 285 aa8.04□□□□□ -1.12
PABPC1-206ENST00000518293 SNRKQ9NRH2 765 aa8.04□□□□□ -1.12
PABPC1-206ENST00000518293 NR6A1Q15406 480 aa8.03□□□□□ -1.12
PABPC1-206ENST00000518293 SH3BP5LQ7L8J4 393 aa8.03□□□□□ -1.12
PABPC1-206ENST00000518293 LINC00528Q8N1L1 170 aa8.03□□□□□ -1.12
PABPC1-206ENST00000518293 EPS8L1Q8TE68 723 aa8.03□□□□□ -1.12
PABPC1-206ENST00000518293 GPKOWQ92917 476 aaPredicted RBP eCLIP8.03□□□□□ -1.12
PABPC1-206ENST00000518293 CARD14Q9BXL6 1004 aa8.03□□□□□ -1.12
PABPC1-206ENST00000518293 MAP4K5Q9Y4K4 846 aa8.03□□□□□ -1.12
PABPC1-206ENST00000518293 TRMT44Q8IYL2 757 aaKnown RBP8.02□□□□□ -1.13
PABPC1-206ENST00000518293 MEIOBQ8N635 442 aa8.02□□□□□ -1.13
PABPC1-206ENST00000518293 MTMR14Q8NCE2 650 aa8.01□□□□□ -1.13
PABPC1-206ENST00000518293 GJD4Q96KN9 370 aaPredicted RBP8.01□□□□□ -1.13
PABPC1-206ENST00000518293 TRIM34Q9BYJ4 488 aa8.01□□□□□ -1.13
PABPC1-206ENST00000518293 EMILIN1Q9Y6C2 1016 aa8.01□□□□□ -1.13
PABPC1-206ENST00000518293 CCDC116Q8IYX3 515 aa8□□□□□ -1.13
PABPC1-206ENST00000518293 VSIG8P0DPA2 414 aa7.99□□□□□ -1.13
PABPC1-206ENST00000518293 TSEN34Q9BSV6 310 aaKnown RBP7.99□□□□□ -1.13
PABPC1-206ENST00000518293 LORP23490 312 aaPredicted RBP7.98□□□□□ -1.13
PABPC1-206ENST00000518293 ERFEQ4G0M1 354 aa7.98□□□□□ -1.13
PABPC1-206ENST00000518293 SOCS7O14512 581 aa7.97□□□□□ -1.13
PABPC1-206ENST00000518293 MCM6Q14566 821 aa7.97□□□□□ -1.13
PABPC1-206ENST00000518293 PDXDC2PQ6P474 469 aa7.97□□□□□ -1.13
PABPC1-206ENST00000518293 ARHGAP9Q9BRR9 750 aa7.97□□□□□ -1.13
PABPC1-206ENST00000518293 PGPEP1Q9NXJ5 209 aa7.97□□□□□ -1.13
PABPC1-206ENST00000518293 SOS2Q07890 1332 aaPredicted RBP7.97□□□□□ -1.13
PABPC1-206ENST00000518293 PPFIA3O75145 1194 aa7.96□□□□□ -1.14
PABPC1-206ENST00000518293 ZBTB33Q86T24 672 aa7.96□□□□□ -1.14
PABPC1-206ENST00000518293 SLC10A4Q96EP9 437 aa7.96□□□□□ -1.14
PABPC1-206ENST00000518293 FKBPLQ9UIM3 349 aa7.96□□□□□ -1.14
PABPC1-206ENST00000518293 DNMT3LQ9UJW3 386 aa7.96□□□□□ -1.14
PABPC1-206ENST00000518293 CDV3Q9UKY7 258 aaKnown RBP7.96□□□□□ -1.14
PABPC1-206ENST00000518293 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.95□□□□□ -1.14
PABPC1-206ENST00000518293 PPP1R26Q5T8A7 1209 aaPredicted RBP7.95□□□□□ -1.14
PABPC1-206ENST00000518293 TTLL8A6PVC2 850 aa7.94□□□□□ -1.14
PABPC1-206ENST00000518293 GPR37L1O60883 481 aa7.94□□□□□ -1.14
PABPC1-206ENST00000518293 KCTD15Q96SI1 283 aaPredicted RBP7.94□□□□□ -1.14
PABPC1-206ENST00000518293 ZC3H4Q9UPT8 1303 aaKnown RBP7.94□□□□□ -1.14
PABPC1-206ENST00000518293 DHX9Q08211 1270 aaKnown RBP7.93□□□□□ -1.14
PABPC1-206ENST00000518293 FLIIQ13045 1269 aa7.93□□□□□ -1.14
PABPC1-206ENST00000518293 GTF3C3Q9Y5Q9 886 aa7.93□□□□□ -1.14
PABPC1-206ENST00000518293 PTK2Q05397 1052 aa7.92□□□□□ -1.14
PABPC1-206ENST00000518293 CBLBQ13191 982 aa7.92□□□□□ -1.14
PABPC1-206ENST00000518293 TBC1D2BQ9UPU7 963 aa7.92□□□□□ -1.14
PABPC1-206ENST00000518293 FIGNL2A6NMB9 653 aa7.91□□□□□ -1.14
PABPC1-206ENST00000518293 Q6ZVU0 165 aa7.91□□□□□ -1.14
PABPC1-206ENST00000518293 PNMA1Q8ND90 353 aa7.91□□□□□ -1.14
PABPC1-206ENST00000518293 OCSTAMPQ9BR26 566 aa7.91□□□□□ -1.14
PABPC1-206ENST00000518293 NDUFB9Q9Y6M9 179 aa7.91□□□□□ -1.14
PABPC1-206ENST00000518293 APBB1O00213 710 aa7.9□□□□□ -1.14
PABPC1-206ENST00000518293 SPINT1O43278 529 aa7.9□□□□□ -1.14
PABPC1-206ENST00000518293 GDPD2Q9HCC8 539 aa7.9□□□□□ -1.14
PABPC1-206ENST00000518293 GPSM3Q9Y4H4 160 aa7.9□□□□□ -1.14
PABPC1-206ENST00000518293 PTSQ03393 145 aa7.89□□□□□ -1.15
PABPC1-206ENST00000518293 POM121Q96HA1 1249 aa7.89□□□□□ -1.15
PABPC1-206ENST00000518293 COG6Q9Y2V7 657 aa7.89□□□□□ -1.15
PABPC1-206ENST00000518293 NBPF20Q3BBV1 942 aa7.88□□□□□ -1.15
PABPC1-206ENST00000518293 INTS6LQ5JSJ4 861 aaKnown RBP7.88□□□□□ -1.15
PABPC1-206ENST00000518293 ADAM32Q8TC27 787 aa7.88□□□□□ -1.15
PABPC1-206ENST00000518293 IRF5Q13568 498 aa7.87□□□□□ -1.15
PABPC1-206ENST00000518293 FBXO45P0C2W1 286 aa7.86□□□□□ -1.15
PABPC1-206ENST00000518293 UBTFP17480 764 aaKnown RBP7.86□□□□□ -1.15
PABPC1-206ENST00000518293 RELBQ01201 579 aa7.86□□□□□ -1.15
PABPC1-206ENST00000518293 CCDC155Q8N6L0 562 aa7.86□□□□□ -1.15
PABPC1-206ENST00000518293 AGBL1Q96MI9 1066 aa7.86□□□□□ -1.15
PABPC1-206ENST00000518293 PRM3Q9NNZ6 103 aa7.86□□□□□ -1.15
PABPC1-206ENST00000518293 ZBBXA8MT70 800 aa7.85□□□□□ -1.15
PABPC1-206ENST00000518293 ABL2P42684 1182 aa7.85□□□□□ -1.15
PABPC1-206ENST00000518293 RAB15P59190 212 aa7.85□□□□□ -1.15
PABPC1-206ENST00000518293 DZIP3Q86Y13 1208 aaKnown RBP7.85□□□□□ -1.15
PABPC1-206ENST00000518293 CLUAP1Q96AJ1 413 aa7.85□□□□□ -1.15
PABPC1-206ENST00000518293 POLMQ9NP87 494 aaPredicted RBP7.85□□□□□ -1.15
PABPC1-206ENST00000518293 GPR161Q8N6U8 529 aaKnown RBP7.84□□□□□ -1.15
PABPC1-206ENST00000518293 NANOS1Q8WY41 292 aaKnown RBP7.84□□□□□ -1.15
PABPC1-206ENST00000518293 CNTNAP3BQ96NU0 1288 aa7.84□□□□□ -1.15
PABPC1-206ENST00000518293 INSM2Q96T92 566 aaPredicted RBP7.84□□□□□ -1.15
PABPC1-206ENST00000518293 CNTNAP3Q9BZ76 1288 aa7.84□□□□□ -1.15
PABPC1-206ENST00000518293 CTSOP43234 321 aaPredicted RBP7.83□□□□□ -1.16
PABPC1-206ENST00000518293 TMPRSS4Q9NRS4 437 aa7.83□□□□□ -1.16
PABPC1-206ENST00000518293 SLC35F4A4IF30 521 aa7.82□□□□□ -1.16
PABPC1-206ENST00000518293 RAD21O60216 631 aa7.82□□□□□ -1.16
PABPC1-206ENST00000518293 KRT76Q01546 638 aa7.82□□□□□ -1.16
PABPC1-206ENST00000518293 NR1H3Q13133 447 aa7.82□□□□□ -1.16
PABPC1-206ENST00000518293 ZNF784Q8NCA9 323 aaPredicted RBP7.82□□□□□ -1.16
PABPC1-206ENST00000518293 COL25A1Q9BXS0 654 aaPredicted RBP7.82□□□□□ -1.16
PABPC1-206ENST00000518293 ZNF395Q9H8N7 513 aaPredicted RBP7.82□□□□□ -1.16
PABPC1-206ENST00000518293 CDC14CA4D256 554 aa7.81□□□□□ -1.16
PABPC1-206ENST00000518293 ITGA6P23229 1130 aa7.81□□□□□ -1.16
PABPC1-206ENST00000518293 TRIM52Q96A61 297 aa7.81□□□□□ -1.16
PABPC1-206ENST00000518293 ERVH48-1M5A8F1 160 aa7.8□□□□□ -1.16
PABPC1-206ENST00000518293 ADH1AP07327 375 aa7.8□□□□□ -1.16
PABPC1-206ENST00000518293 VAC14Q08AM6 782 aa7.8□□□□□ -1.16
PABPC1-206ENST00000518293 SV2AQ7L0J3 742 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms