RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 AKAP12Q02952 1782 aa14.29□□□□□ -0.12
BRD9-216ENST00000518251 LRRC37A3O60309 1634 aa14.28□□□□□ -0.12
BRD9-216ENST00000518251 TRIM37O94972 964 aa14.28□□□□□ -0.12
BRD9-216ENST00000518251 AMER1Q5JTC6 1135 aaPredicted RBP14.28□□□□□ -0.12
BRD9-216ENST00000518251 CARD14Q9BXL6 1004 aa14.28□□□□□ -0.12
BRD9-216ENST00000518251 TERF2IPQ9NYB0 399 aa14.28□□□□□ -0.12
BRD9-216ENST00000518251 PEAK1Q9H792 1746 aa14.27□□□□□ -0.12
BRD9-216ENST00000518251 COL5A2P05997 1499 aaPredicted RBP14.27□□□□□ -0.12
BRD9-216ENST00000518251 CPDO75976 1380 aa14.27□□□□□ -0.12
BRD9-216ENST00000518251 USP19O94966 1318 aa14.27□□□□□ -0.12
BRD9-216ENST00000518251 MYBBP1AQ9BQG0 1328 aaKnown RBP14.27□□□□□ -0.12
BRD9-216ENST00000518251 CC2D1BQ5T0F9 858 aaKnown RBP14.27□□□□□ -0.13
BRD9-216ENST00000518251 FAM196AQ6ZSG2 479 aa14.27□□□□□ -0.13
BRD9-216ENST00000518251 HDGFL2Q7Z4V5 671 aaPredicted RBP14.27□□□□□ -0.13
BRD9-216ENST00000518251 NUDT16Q96DE0 195 aaKnown RBP14.27□□□□□ -0.13
BRD9-216ENST00000518251 STRN4Q9NRL3 753 aa14.27□□□□□ -0.13
BRD9-216ENST00000518251 KIF20BQ96Q89 1820 aa14.27□□□□□ -0.13
BRD9-216ENST00000518251 RGPD3A6NKT7 1758 aaPredicted RBP14.27□□□□□ -0.13
BRD9-216ENST00000518251 RGPD4Q7Z3J3 1758 aa14.27□□□□□ -0.13
BRD9-216ENST00000518251 ANKRD26Q9UPS8 1709 aa14.27□□□□□ -0.13
BRD9-216ENST00000518251 BARGINQ6ZT62 677 aa14.26□□□□□ -0.13
BRD9-216ENST00000518251 CABP1Q9NZU7 370 aa14.26□□□□□ -0.13
BRD9-216ENST00000518251 NSD2O96028 1365 aa14.25□□□□□ -0.13
BRD9-216ENST00000518251 ZC3H6P61129 1189 aaKnown RBP14.25□□□□□ -0.13
BRD9-216ENST00000518251 CCDC61Q9Y6R9 512 aa14.25□□□□□ -0.13
BRD9-216ENST00000518251 CPSF1Q10570 1443 aaKnown RBP14.24□□□□□ -0.13
BRD9-216ENST00000518251 APBA3O96018 575 aa14.24□□□□□ -0.13
BRD9-216ENST00000518251 NUTM2GQ5VZR2 741 aa14.24□□□□□ -0.13
BRD9-216ENST00000518251 USP35Q9P2H5 1018 aa14.24□□□□□ -0.13
BRD9-216ENST00000518251 SLIT3O75094 1523 aa14.24□□□□□ -0.13
BRD9-216ENST00000518251 CGNL1Q0VF96 1302 aa14.23□□□□□ -0.13
BRD9-216ENST00000518251 LARP1Q6PKG0 1096 aaKnown RBP14.23□□□□□ -0.13
BRD9-216ENST00000518251 EDC4Q6P2E9 1401 aaKnown RBP14.23□□□□□ -0.13
BRD9-216ENST00000518251 BRD4O60885 1362 aaPredicted RBP14.22□□□□□ -0.13
BRD9-216ENST00000518251 WNK3Q9BYP7 1800 aa14.22□□□□□ -0.13
BRD9-216ENST00000518251 ACEP12821 1306 aa14.22□□□□□ -0.13
BRD9-216ENST00000518251 MRS2Q9HD23 443 aa14.22□□□□□ -0.13
BRD9-216ENST00000518251 OVOS2A0A0G2JMS6 1433 aa14.22□□□□□ -0.13
BRD9-216ENST00000518251 OVOS2A0A0J9YW53 1432 aa14.22□□□□□ -0.13
BRD9-216ENST00000518251 OVOS2Q6IE36 1432 aa14.22□□□□□ -0.13
BRD9-216ENST00000518251 CASZ1Q86V15 1759 aa14.22□□□□□ -0.13
BRD9-216ENST00000518251 NLRP13Q86W25 1043 aa14.21□□□□□ -0.13
BRD9-216ENST00000518251 TCP11L2Q8N4U5 519 aa14.21□□□□□ -0.13
BRD9-216ENST00000518251 PLEKHG3A1L390 1219 aa14.2□□□□□ -0.14
BRD9-216ENST00000518251 CCDC184Q52MB2 194 aa14.2□□□□□ -0.14
BRD9-216ENST00000518251 CRB1P82279 1406 aa14.2□□□□□ -0.14
BRD9-216ENST00000518251 PDE3BQ13370 1112 aa14.19□□□□□ -0.14
BRD9-216ENST00000518251 YTHDC1Q96MU7 727 aaKnown RBP14.19□□□□□ -0.14
BRD9-216ENST00000518251 PIK3C2AO00443 1686 aa14.19□□□□□ -0.14
BRD9-216ENST00000518251 USP6P35125 1406 aa14.18□□□□□ -0.14
BRD9-216ENST00000518251 ZNF692Q9BU19 519 aaPredicted RBP14.18□□□□□ -0.14
BRD9-216ENST00000518251 THRAP3Q9Y2W1 955 aaKnown RBP14.18□□□□□ -0.14
BRD9-216ENST00000518251 PPP2R1AP30153 589 aa14.17□□□□□ -0.14
BRD9-216ENST00000518251 MORC1Q86VD1 984 aa14.17□□□□□ -0.14
BRD9-216ENST00000518251 ABTB2Q8N961 1025 aa14.17□□□□□ -0.14
BRD9-216ENST00000518251 YY1P25490 414 aa14.16□□□□□ -0.14
BRD9-216ENST00000518251 EVA1CP58658 441 aa14.16□□□□□ -0.14
BRD9-216ENST00000518251 ANO8Q9HCE9 1232 aaPredicted RBP14.16□□□□□ -0.14
BRD9-216ENST00000518251 COL18A1P39060 1754 aa14.15□□□□□ -0.14
BRD9-216ENST00000518251 AATKQ6ZMQ8 1374 aa14.14□□□□□ -0.15
BRD9-216ENST00000518251 FYB1O15117 783 aa14.14□□□□□ -0.15
BRD9-216ENST00000518251 GCP02774 474 aa14.14□□□□□ -0.15
BRD9-216ENST00000518251 NBPF14Q5TI25 921 aa14.14□□□□□ -0.15
BRD9-216ENST00000518251 GGNBP2Q9H3C7 697 aa14.14□□□□□ -0.15
BRD9-216ENST00000518251 SPON1Q9HCB6 807 aa14.14□□□□□ -0.15
BRD9-216ENST00000518251 BCL9O00512 1426 aa14.14□□□□□ -0.15
BRD9-216ENST00000518251 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.13□□□□□ -0.15
BRD9-216ENST00000518251 SBF2Q86WG5 1849 aa14.13□□□□□ -0.15
BRD9-216ENST00000518251 USP54Q70EL1 1684 aa14.12□□□□□ -0.15
BRD9-216ENST00000518251 KCNQ2O43526 872 aa14.12□□□□□ -0.15
BRD9-216ENST00000518251 FAM9BQ8IZU0 186 aa14.12□□□□□ -0.15
BRD9-216ENST00000518251 TTC21BQ7Z4L5 1316 aa14.12□□□□□ -0.15
BRD9-216ENST00000518251 TTC21AQ8NDW8 1320 aa14.12□□□□□ -0.15
BRD9-216ENST00000518251 NFAT5O94916 1531 aa14.11□□□□□ -0.15
BRD9-216ENST00000518251 PTF1AQ7RTS3 328 aa14.11□□□□□ -0.15
BRD9-216ENST00000518251 NME9Q86XW9 330 aa14.11□□□□□ -0.15
BRD9-216ENST00000518251 PPP1R1BQ9UD71 204 aaPredicted RBP14.11□□□□□ -0.15
BRD9-216ENST00000518251 ABCC6O95255 1503 aa14.1□□□□□ -0.15
BRD9-216ENST00000518251 PNISRQ8TF01 805 aaKnown RBP14.1□□□□□ -0.15
BRD9-216ENST00000518251 PAPPAQ13219 1627 aa14.1□□□□□ -0.15
BRD9-216ENST00000518251 TNS2Q63HR2 1409 aa14.09□□□□□ -0.15
BRD9-216ENST00000518251 PLSCR1O15162 318 aa14.09□□□□□ -0.15
BRD9-216ENST00000518251 TNNT2P45379 298 aaPredicted RBP14.09□□□□□ -0.15
BRD9-216ENST00000518251 PDGFDQ9GZP0 370 aaPredicted RBP14.09□□□□□ -0.15
BRD9-216ENST00000518251 WDR17Q8IZU2 1322 aa14.09□□□□□ -0.15
BRD9-216ENST00000518251 NHSQ6T4R5 1651 aa14.08□□□□□ -0.16
BRD9-216ENST00000518251 CENPBP07199 599 aaPredicted RBP14.08□□□□□ -0.16
BRD9-216ENST00000518251 DDB1Q16531 1140 aa14.08□□□□□ -0.16
BRD9-216ENST00000518251 COG3Q96JB2 828 aa14.08□□□□□ -0.16
BRD9-216ENST00000518251 ZBTB7CA1YPR0 619 aa14.07□□□□□ -0.16
BRD9-216ENST00000518251 USP31Q70CQ4 1352 aa14.07□□□□□ -0.16
BRD9-216ENST00000518251 SMG6Q86US8 1419 aaKnown RBP14.07□□□□□ -0.16
BRD9-216ENST00000518251 TOM1L2Q6ZVM7 507 aa14.06□□□□□ -0.16
BRD9-216ENST00000518251 MARCH10Q8NA82 808 aaPredicted RBP14.06□□□□□ -0.16
BRD9-216ENST00000518251 BCL11BQ9C0K0 894 aaPredicted RBP14.06□□□□□ -0.16
BRD9-216ENST00000518251 AXIN2Q9Y2T1 843 aa14.06□□□□□ -0.16
BRD9-216ENST00000518251 INSRP06213 1382 aa14.06□□□□□ -0.16
BRD9-216ENST00000518251 PTGER2P43116 358 aa14.05□□□□□ -0.16
BRD9-216ENST00000518251 NLRP6P59044 892 aa14.05□□□□□ -0.16
BRD9-216ENST00000518251 PROM2Q8N271 834 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms