RNA–Protein interactions for RNA: ENST00000518142.5

GRIA1-208, Transcript of glutamate ionotropic receptor AMPA type subunit 1, human

TSL 2 BASIC

Gene GRIA1, Length 2,761 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRIA1-208	ENST00000518142	DZIP1L	Q8IYY4	767 aa	Known RBP	11.96	□□□□□ -0.49
GRIA1-208	ENST00000518142	USP25	Q9UHP3	1055 aa		11.96	□□□□□ -0.49
GRIA1-208	ENST00000518142	DNAJC5	Q9H3Z4	198 aa		11.96	□□□□□ -0.49
GRIA1-208	ENST00000518142	TSPY26P	Q9H489	355 aa		11.96	□□□□□ -0.5
GRIA1-208	ENST00000518142	TRIM6-TRIM34	B2RNG4	842 aa		11.95	□□□□□ -0.5
GRIA1-208	ENST00000518142	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.95	□□□□□ -0.5
GRIA1-208	ENST00000518142	CLEC17A	Q6ZS10	378 aa		11.95	□□□□□ -0.5
GRIA1-208	ENST00000518142	TRIM34	Q9BYJ4	488 aa		11.95	□□□□□ -0.5
GRIA1-208	ENST00000518142	ZKSCAN8	Q15776	578 aa	Predicted RBP	11.95	□□□□□ -0.5
GRIA1-208	ENST00000518142	ZKSCAN2	Q63HK3	967 aa		11.95	□□□□□ -0.5
GRIA1-208	ENST00000518142	ZGPAT	Q8N5A5	531 aa	Known RBP	11.95	□□□□□ -0.5
GRIA1-208	ENST00000518142	BSDC1	Q9NW68	430 aa	Predicted RBP	11.95	□□□□□ -0.5
GRIA1-208	ENST00000518142	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.95	□□□□□ -0.5
GRIA1-208	ENST00000518142	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.94	□□□□□ -0.5
GRIA1-208	ENST00000518142	POLD1	P28340	1107 aa		11.94	□□□□□ -0.5
GRIA1-208	ENST00000518142	CCDC66	A2RUB6	948 aa		11.94	□□□□□ -0.5
GRIA1-208	ENST00000518142	TIGD1	Q96MW7	591 aa		11.94	□□□□□ -0.5
GRIA1-208	ENST00000518142	OGFR	Q9NZT2	677 aa		11.94	□□□□□ -0.5
GRIA1-208	ENST00000518142	AK9	Q5TCS8	1911 aa		11.93	□□□□□ -0.5
GRIA1-208	ENST00000518142	TBC1D9	Q6ZT07	1266 aa		11.93	□□□□□ -0.5
GRIA1-208	ENST00000518142	GAPVD1	Q14C86	1478 aa		11.93	□□□□□ -0.5
GRIA1-208	ENST00000518142	FKBP5	Q13451	457 aa	Predicted RBP	11.93	□□□□□ -0.5
GRIA1-208	ENST00000518142	MLEC	Q14165	292 aa		11.93	□□□□□ -0.5
GRIA1-208	ENST00000518142	DIAPH3	Q9NSV4	1193 aa		11.93	□□□□□ -0.5
GRIA1-208	ENST00000518142	SMC4	Q9NTJ3	1288 aa		11.93	□□□□□ -0.5
GRIA1-208	ENST00000518142	FAM135A	Q9P2D6	1515 aa		11.93	□□□□□ -0.5
GRIA1-208	ENST00000518142	MAGI2	Q86UL8	1455 aa		11.93	□□□□□ -0.5
GRIA1-208	ENST00000518142	MTA1	Q13330	715 aa		11.92	□□□□□ -0.5
GRIA1-208	ENST00000518142	ANKRD45	Q5TZF3	282 aa		11.92	□□□□□ -0.5
GRIA1-208	ENST00000518142	ARHGEF12	Q9NZN5	1544 aa		11.92	□□□□□ -0.5
GRIA1-208	ENST00000518142	FEZ1	Q99689	392 aa		11.92	□□□□□ -0.5
GRIA1-208	ENST00000518142	NES	P48681	1621 aa		11.91	□□□□□ -0.5
GRIA1-208	ENST00000518142	ADCY5	O95622	1261 aa		11.91	□□□□□ -0.5
GRIA1-208	ENST00000518142	SIRT1	Q96EB6	747 aa		11.91	□□□□□ -0.5
GRIA1-208	ENST00000518142	ANKRD50	Q9ULJ7	1429 aa		11.91	□□□□□ -0.5
GRIA1-208	ENST00000518142	SLFN14	P0C7P3	912 aa		11.91	□□□□□ -0.5
GRIA1-208	ENST00000518142	ANKRD23	Q86SG2	305 aa		11.91	□□□□□ -0.5
GRIA1-208	ENST00000518142	EFCC1	Q9HA90	598 aa		11.91	□□□□□ -0.5
GRIA1-208	ENST00000518142	PRAG1	Q86YV5	1406 aa		11.91	□□□□□ -0.5
GRIA1-208	ENST00000518142	CCDC172	P0C7W6	258 aa		11.9	□□□□□ -0.5
GRIA1-208	ENST00000518142	HDAC1	Q13547	482 aa	Predicted RBP	11.9	□□□□□ -0.5
GRIA1-208	ENST00000518142	CHD1L	Q86WJ1	897 aa		11.9	□□□□□ -0.5
GRIA1-208	ENST00000518142	ANKRD7	Q92527	254 aa		11.9	□□□□□ -0.5
GRIA1-208	ENST00000518142	MYCBP	Q99417	103 aa	Predicted RBP	11.9	□□□□□ -0.5
GRIA1-208	ENST00000518142	DNMT1	P26358	1616 aa	Known RBP	11.9	□□□□□ -0.5
GRIA1-208	ENST00000518142	CCDC144A	A2RUR9	1427 aa		11.9	□□□□□ -0.5
GRIA1-208	ENST00000518142	CAPN2	P17655	700 aa		11.9	□□□□□ -0.5
GRIA1-208	ENST00000518142	GABPB1	Q06547	395 aa	Predicted RBP	11.9	□□□□□ -0.5
GRIA1-208	ENST00000518142	NAA30	Q147X3	362 aa	Predicted RBP	11.9	□□□□□ -0.5
GRIA1-208	ENST00000518142	TCP11L2	Q8N4U5	519 aa		11.9	□□□□□ -0.5
GRIA1-208	ENST00000518142	TSPAN18	Q96SJ8	248 aa		11.9	□□□□□ -0.5
GRIA1-208	ENST00000518142	RIPOR2	Q9Y4F9	1068 aa		11.9	□□□□□ -0.5
GRIA1-208	ENST00000518142	CADPS	Q9ULU8	1353 aa		11.9	□□□□□ -0.5
GRIA1-208	ENST00000518142	CLASP1	Q7Z460	1538 aa		11.9	□□□□□ -0.5
GRIA1-208	ENST00000518142	MYBPC2	Q14324	1141 aa		11.9	□□□□□ -0.51
GRIA1-208	ENST00000518142	SPC24	Q8NBT2	197 aa		11.9	□□□□□ -0.51
GRIA1-208	ENST00000518142	GDPD2	Q9HCC8	539 aa		11.9	□□□□□ -0.51
GRIA1-208	ENST00000518142	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.9	□□□□□ -0.51
GRIA1-208	ENST00000518142	MRVI1	Q9Y6F6	885 aa		11.9	□□□□□ -0.51
GRIA1-208	ENST00000518142	CT47B1	P0C2W7	299 aa	Predicted RBP	11.89	□□□□□ -0.51
GRIA1-208	ENST00000518142	TRIM27	P14373	513 aa		11.89	□□□□□ -0.51
GRIA1-208	ENST00000518142	BRPF1	P55201	1214 aa	Predicted RBP	11.89	□□□□□ -0.51
GRIA1-208	ENST00000518142	TSR2	Q969E8	191 aa	Known RBP	11.89	□□□□□ -0.51
GRIA1-208	ENST00000518142	NUCB1	Q02818	461 aa		11.89	□□□□□ -0.51
GRIA1-208	ENST00000518142	ARHGEF1	Q92888	912 aa	Known RBP	11.89	□□□□□ -0.51
GRIA1-208	ENST00000518142	DDX19B	Q9UMR2	479 aa		11.89	□□□□□ -0.51
GRIA1-208	ENST00000518142	CYP2E1	P05181	493 aa	Predicted RBP	11.88	□□□□□ -0.51
GRIA1-208	ENST00000518142	NCBP1	Q09161	790 aa	Known RBP	11.88	□□□□□ -0.51
GRIA1-208	ENST00000518142	BMP2KL	Q5H9B9	411 aa		11.88	□□□□□ -0.51
GRIA1-208	ENST00000518142	PYCARD	Q9ULZ3	195 aa		11.88	□□□□□ -0.51
GRIA1-208	ENST00000518142	BRD1	O95696	1058 aa		11.88	□□□□□ -0.51
GRIA1-208	ENST00000518142	MBD3	O95983	291 aa		11.88	□□□□□ -0.51
GRIA1-208	ENST00000518142	TSPYL1	Q9H0U9	437 aa		11.88	□□□□□ -0.51
GRIA1-208	ENST00000518142	ZDHHC9	Q9Y397	364 aa		11.88	□□□□□ -0.51
GRIA1-208	ENST00000518142	TNNT3	P45378	269 aa	Predicted RBP	11.87	□□□□□ -0.51
GRIA1-208	ENST00000518142	TERF2	Q15554	542 aa		11.87	□□□□□ -0.51
GRIA1-208	ENST00000518142	TMEM57	Q8N5G2	664 aa		11.87	□□□□□ -0.51
GRIA1-208	ENST00000518142	CALR3	Q96L12	384 aa	Known RBP	11.87	□□□□□ -0.51
GRIA1-208	ENST00000518142	RBM28	Q9NW13	759 aa	Known RBP	11.87	□□□□□ -0.51
GRIA1-208	ENST00000518142	SAMD9	Q5K651	1589 aa		11.87	□□□□□ -0.51
GRIA1-208	ENST00000518142	PIK3C2G	O75747	1445 aa		11.87	□□□□□ -0.51
GRIA1-208	ENST00000518142	RABEP1	Q15276	862 aa		11.87	□□□□□ -0.51
GRIA1-208	ENST00000518142	NOL8	Q76FK4	1167 aa	Known RBP	11.87	□□□□□ -0.51
GRIA1-208	ENST00000518142	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
GRIA1-208	ENST00000518142	CTNNA3	Q9UI47	895 aa		11.87	□□□□□ -0.51
GRIA1-208	ENST00000518142	HCLS1	P14317	486 aa	Predicted RBP	11.86	□□□□□ -0.51
GRIA1-208	ENST00000518142	SYAP1	Q96A49	352 aa	Predicted RBP	11.86	□□□□□ -0.51
GRIA1-208	ENST00000518142	SPTLC3	Q9NUV7	552 aa		11.86	□□□□□ -0.51
GRIA1-208	ENST00000518142	NRDC	O43847	1150 aa		11.86	□□□□□ -0.51
GRIA1-208	ENST00000518142	NCAPG	Q9BPX3	1015 aa		11.85	□□□□□ -0.51
GRIA1-208	ENST00000518142	CALCOCO1	Q9P1Z2	691 aa		11.85	□□□□□ -0.51
GRIA1-208	ENST00000518142	NOB1	Q9ULX3	412 aa	Known RBP	11.85	□□□□□ -0.51
GRIA1-208	ENST00000518142	ABCC2	Q92887	1545 aa		11.85	□□□□□ -0.51
GRIA1-208	ENST00000518142	IPO8	O15397	1037 aa	Known RBP	11.85	□□□□□ -0.51
GRIA1-208	ENST00000518142	ITFG2	Q969R8	447 aa		11.85	□□□□□ -0.51
GRIA1-208	ENST00000518142	C16orf45	Q96MC5	204 aa	Predicted RBP	11.85	□□□□□ -0.51
GRIA1-208	ENST00000518142	ST7	Q9NRC1	585 aa		11.84	□□□□□ -0.51
GRIA1-208	ENST00000518142	TDRD9	Q8NDG6	1382 aa	Known RBP	11.84	□□□□□ -0.51
GRIA1-208	ENST00000518142	WDR7	Q9Y4E6	1490 aa		11.84	□□□□□ -0.51
GRIA1-208	ENST00000518142	U2SURP	O15042	1029 aa	Known RBP	11.84	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms