RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 MTFR1LQ9H019 292 aa15.09■□□□□ 0.01
PDGFRB-203ENST00000517660 LRRC37A3O60309 1634 aa15.09■□□□□ 0.01
PDGFRB-203ENST00000517660 POLR3AO14802 1390 aaPredicted RBP15.09■□□□□ 0.01
PDGFRB-203ENST00000517660 ROCK2O75116 1388 aaKnown RBP15.09■□□□□ 0.01
PDGFRB-203ENST00000517660 SLC15A2Q16348 729 aa15.07■□□□□ 0
PDGFRB-203ENST00000517660 NUTM2GQ5VZR2 741 aa15.07■□□□□ 0
PDGFRB-203ENST00000517660 EVC2Q86UK5 1308 aa15.07■□□□□ 0
PDGFRB-203ENST00000517660 EVA1CP58658 441 aa15.06■□□□□ 0
PDGFRB-203ENST00000517660 ARXQ96QS3 562 aa15.06■□□□□ 0
PDGFRB-203ENST00000517660 CABP1Q9NZU7 370 aa15.06■□□□□ 0
PDGFRB-203ENST00000517660 THRAP3Q9Y2W1 955 aaKnown RBP15.06■□□□□ 0
PDGFRB-203ENST00000517660 ABTB2Q8N961 1025 aa15.05■□□□□ -0
PDGFRB-203ENST00000517660 CPDO75976 1380 aa15.05■□□□□ -0
PDGFRB-203ENST00000517660 TONSLQ96HA7 1378 aa15.05■□□□□ -0
PDGFRB-203ENST00000517660 COL5A2P05997 1499 aaPredicted RBP15.05■□□□□ -0
PDGFRB-203ENST00000517660 PPIP5K1Q6PFW1 1433 aa15.04■□□□□ -0
PDGFRB-203ENST00000517660 TXNRD1Q16881 649 aa15.04■□□□□ -0
PDGFRB-203ENST00000517660 PAPPAQ13219 1627 aa15.03■□□□□ -0
PDGFRB-203ENST00000517660 C11orf95C9JLR9 678 aaPredicted RBP15.03■□□□□ -0
PDGFRB-203ENST00000517660 GPR162Q16538 588 aa15.03■□□□□ -0
PDGFRB-203ENST00000517660 CARD11Q9BXL7 1154 aa15.03■□□□□ -0
PDGFRB-203ENST00000517660 STK32BQ9NY57 414 aa15.03■□□□□ -0
PDGFRB-203ENST00000517660 BCL9O00512 1426 aa15.02■□□□□ -0
PDGFRB-203ENST00000517660 BRD4O60885 1362 aaPredicted RBP15.02■□□□□ -0
PDGFRB-203ENST00000517660 NLRP13Q86W25 1043 aa15.02■□□□□ -0
PDGFRB-203ENST00000517660 MARCH10Q8NA82 808 aaPredicted RBP15.02■□□□□ -0
PDGFRB-203ENST00000517660 AATKQ6ZMQ8 1374 aa15.01□□□□□ -0.01
PDGFRB-203ENST00000517660 CRB1P82279 1406 aa15□□□□□ -0.01
PDGFRB-203ENST00000517660 USP19O94966 1318 aa15□□□□□ -0.01
PDGFRB-203ENST00000517660 HSPA6P17066 643 aa15□□□□□ -0.01
PDGFRB-203ENST00000517660 ZNF692Q9BU19 519 aaPredicted RBP15□□□□□ -0.01
PDGFRB-203ENST00000517660 ITSN1Q15811 1721 aa14.99□□□□□ -0.01
PDGFRB-203ENST00000517660 TRPM1Q7Z4N2 1603 aa14.99□□□□□ -0.01
PDGFRB-203ENST00000517660 GCP02774 474 aa14.98□□□□□ -0.01
PDGFRB-203ENST00000517660 DDB1Q16531 1140 aa14.98□□□□□ -0.01
PDGFRB-203ENST00000517660 NLGN2Q8NFZ4 835 aa14.98□□□□□ -0.01
PDGFRB-203ENST00000517660 ATP10DQ9P241 1426 aa14.98□□□□□ -0.01
PDGFRB-203ENST00000517660 YBX3P16989 372 aaKnown RBP eCLIP14.97□□□□□ -0.01
PDGFRB-203ENST00000517660 NLRP6P59044 892 aa14.97□□□□□ -0.01
PDGFRB-203ENST00000517660 ZNF827Q17R98 1081 aa14.97□□□□□ -0.01
PDGFRB-203ENST00000517660 TOPAZ1Q8N9V7 1692 aa14.97□□□□□ -0.01
PDGFRB-203ENST00000517660 USP6P35125 1406 aa14.96□□□□□ -0.01
PDGFRB-203ENST00000517660 COL24A1Q17RW2 1714 aa14.96□□□□□ -0.01
PDGFRB-203ENST00000517660 WNK3Q9BYP7 1800 aa14.96□□□□□ -0.01
PDGFRB-203ENST00000517660 SBNO2Q9Y2G9 1366 aa14.96□□□□□ -0.02
PDGFRB-203ENST00000517660 QRICH2Q9H0J4 1663 aa14.95□□□□□ -0.02
PDGFRB-203ENST00000517660 PELP1Q8IZL8 1130 aaKnown RBP14.94□□□□□ -0.02
PDGFRB-203ENST00000517660 TTC21BQ7Z4L5 1316 aa14.93□□□□□ -0.02
PDGFRB-203ENST00000517660 PUS7Q96PZ0 661 aaKnown RBP14.93□□□□□ -0.02
PDGFRB-203ENST00000517660 ADCY9O60503 1353 aa14.93□□□□□ -0.02
PDGFRB-203ENST00000517660 SLC24A1O60721 1099 aa14.92□□□□□ -0.02
PDGFRB-203ENST00000517660 TTC21AQ8NDW8 1320 aa14.92□□□□□ -0.02
PDGFRB-203ENST00000517660 AKAP12Q02952 1782 aa14.91□□□□□ -0.02
PDGFRB-203ENST00000517660 TMC1Q8TDI8 760 aa14.91□□□□□ -0.02
PDGFRB-203ENST00000517660 COL18A1P39060 1754 aa14.9□□□□□ -0.02
PDGFRB-203ENST00000517660 KTN1Q86UP2 1357 aaKnown RBP14.9□□□□□ -0.02
PDGFRB-203ENST00000517660 KLHL34Q8N239 644 aa14.9□□□□□ -0.02
PDGFRB-203ENST00000517660 KCNH5Q8NCM2 988 aa14.9□□□□□ -0.02
PDGFRB-203ENST00000517660 LRRC4BQ9NT99 713 aa14.9□□□□□ -0.02
PDGFRB-203ENST00000517660 CPSF1Q10570 1443 aaKnown RBP14.9□□□□□ -0.02
PDGFRB-203ENST00000517660 NHSQ6T4R5 1651 aa14.9□□□□□ -0.02
PDGFRB-203ENST00000517660 ST20-MTHFSA0A0A6YYL1 179 aa14.89□□□□□ -0.03
PDGFRB-203ENST00000517660 ZBTB7CA1YPR0 619 aa14.89□□□□□ -0.03
PDGFRB-203ENST00000517660 HDGFL2Q7Z4V5 671 aaPredicted RBP14.89□□□□□ -0.03
PDGFRB-203ENST00000517660 DNAJC5GQ8N7S2 189 aa14.89□□□□□ -0.03
PDGFRB-203ENST00000517660 PCGF6Q9BYE7 350 aa14.89□□□□□ -0.03
PDGFRB-203ENST00000517660 SLC12A5Q9H2X9 1139 aa14.89□□□□□ -0.03
PDGFRB-203ENST00000517660 TIMELESSQ9UNS1 1208 aa14.89□□□□□ -0.03
PDGFRB-203ENST00000517660 AXIN2Q9Y2T1 843 aa14.89□□□□□ -0.03
PDGFRB-203ENST00000517660 AKT1S1Q96B36 256 aa14.88□□□□□ -0.03
PDGFRB-203ENST00000517660 TESK2Q96S53 571 aa14.88□□□□□ -0.03
PDGFRB-203ENST00000517660 SLIT3O75094 1523 aa14.87□□□□□ -0.03
PDGFRB-203ENST00000517660 COL13A1Q5TAT6 717 aaPredicted RBP14.87□□□□□ -0.03
PDGFRB-203ENST00000517660 TOM1L2Q6ZVM7 507 aa14.87□□□□□ -0.03
PDGFRB-203ENST00000517660 ARHGEF25Q86VW2 580 aa14.87□□□□□ -0.03
PDGFRB-203ENST00000517660 GPBP1L1Q9HC44 474 aaPredicted RBP14.87□□□□□ -0.03
PDGFRB-203ENST00000517660 TERF2IPQ9NYB0 399 aa14.87□□□□□ -0.03
PDGFRB-203ENST00000517660 WDR17Q8IZU2 1322 aa14.87□□□□□ -0.03
PDGFRB-203ENST00000517660 CLSPNQ9HAW4 1339 aa14.87□□□□□ -0.03
PDGFRB-203ENST00000517660 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.86□□□□□ -0.03
PDGFRB-203ENST00000517660 PNPLA7Q6ZV29 1317 aa14.86□□□□□ -0.03
PDGFRB-203ENST00000517660 ZNF526Q8TF50 670 aaPredicted RBP14.85□□□□□ -0.03
PDGFRB-203ENST00000517660 QSER1Q2KHR3 1735 aa14.85□□□□□ -0.03
PDGFRB-203ENST00000517660 TNS2Q63HR2 1409 aa14.84□□□□□ -0.03
PDGFRB-203ENST00000517660 KIF3CO14782 793 aa14.84□□□□□ -0.03
PDGFRB-203ENST00000517660 SOX12O15370 315 aa14.84□□□□□ -0.03
PDGFRB-203ENST00000517660 GRIN3BO60391 1043 aa14.84□□□□□ -0.03
PDGFRB-203ENST00000517660 SLC16A10Q8TF71 515 aa14.84□□□□□ -0.03
PDGFRB-203ENST00000517660 ACSBG1Q96GR2 724 aa14.84□□□□□ -0.03
PDGFRB-203ENST00000517660 USP31Q70CQ4 1352 aa14.84□□□□□ -0.03
PDGFRB-203ENST00000517660 TUBGCP6Q96RT7 1819 aa14.83□□□□□ -0.04
PDGFRB-203ENST00000517660 CAPN15O75808 1086 aa14.83□□□□□ -0.04
PDGFRB-203ENST00000517660 NME9Q86XW9 330 aa14.83□□□□□ -0.04
PDGFRB-203ENST00000517660 CDCA7Q9BWT1 371 aaPredicted RBP14.83□□□□□ -0.04
PDGFRB-203ENST00000517660 POLD1P28340 1107 aa14.82□□□□□ -0.04
PDGFRB-203ENST00000517660 TMF1P82094 1093 aa14.82□□□□□ -0.04
PDGFRB-203ENST00000517660 BTAF1O14981 1849 aa14.82□□□□□ -0.04
PDGFRB-203ENST00000517660 CD163L1Q9NR16 1453 aa14.82□□□□□ -0.04
PDGFRB-203ENST00000517660 CARD10Q9BWT7 1032 aa14.81□□□□□ -0.04
PDGFRB-203ENST00000517660 CSB-PGBD3P0DP91 1061 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms