RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 CRB1P82279 1406 aa34.38■■■■□ 3.09
PVT1-204ENST00000517525 EIF4G2P78344 907 aaKnown RBP eCLIP34.37■■■■□ 3.092e-6■■■■■ 30.5
PVT1-204ENST00000517525 A0A0G2JS52 829 aa34.36■■■■□ 3.09
PVT1-204ENST00000517525 MYT1Q01538 1121 aa34.36■■■■□ 3.09
PVT1-204ENST00000517525 BLMP54132 1417 aaPredicted RBP34.35■■■■□ 3.09
PVT1-204ENST00000517525 WDR17Q8IZU2 1322 aa34.34■■■■□ 3.09
PVT1-204ENST00000517525 ZBTB7CA1YPR0 619 aa34.34■■■■□ 3.09
PVT1-204ENST00000517525 SOX12O15370 315 aa34.32■■■■□ 3.08
PVT1-204ENST00000517525 USP35Q9P2H5 1018 aa34.32■■■■□ 3.08
PVT1-204ENST00000517525 EP400Q96L91 3159 aa34.31■■■■□ 3.08
PVT1-204ENST00000517525 HSPA5P11021 654 aaKnown RBP34.28■■■■□ 3.08
PVT1-204ENST00000517525 COG3Q96JB2 828 aa34.28■■■■□ 3.08
PVT1-204ENST00000517525 FYB1O15117 783 aa34.26■■■■□ 3.08
PVT1-204ENST00000517525 TOM1L2Q6ZVM7 507 aa34.26■■■■□ 3.08
PVT1-204ENST00000517525 CARD10Q9BWT7 1032 aa34.26■■■■□ 3.08
PVT1-204ENST00000517525 CDCA7Q9BWT1 371 aaPredicted RBP34.22■■■■□ 3.07
PVT1-204ENST00000517525 CARD14Q9BXL6 1004 aa34.22■■■■□ 3.07
PVT1-204ENST00000517525 MYOM1P52179 1685 aa34.22■■■■□ 3.07
PVT1-204ENST00000517525 FAM196AQ6ZSG2 479 aa34.21■■■■□ 3.07
PVT1-204ENST00000517525 PDE3BQ13370 1112 aa34.2■■■■□ 3.07
PVT1-204ENST00000517525 ERBB3P21860 1342 aa34.2■■■■□ 3.07
PVT1-204ENST00000517525 SF3B2Q13435 895 aaKnown RBP34.19■■■■□ 3.06
PVT1-204ENST00000517525 IP6K1Q92551 441 aa34.19■■■■□ 3.06
PVT1-204ENST00000517525 CCDC7Q96M83 1385 aa34.19■■■■□ 3.06
PVT1-204ENST00000517525 PARP4Q9UKK3 1724 aaKnown RBP34.18■■■■□ 3.06
PVT1-204ENST00000517525 CSB-PGBD3P0DP91 1061 aa34.18■■■■□ 3.06
PVT1-204ENST00000517525 C11orf95C9JLR9 678 aaPredicted RBP34.17■■■■□ 3.06
PVT1-204ENST00000517525 RGPD5Q99666 1765 aa34.16■■■■□ 3.06
PVT1-204ENST00000517525 FAM182BQ5T319 152 aa34.15■■■■□ 3.06
PVT1-204ENST00000517525 LTN1O94822 1766 aa34.15■■■■□ 3.06
PVT1-204ENST00000517525 DISP2A7MBM2 1401 aa34.14■■■■□ 3.06
PVT1-204ENST00000517525 GGNBP2Q9H3C7 697 aa34.14■■■■□ 3.06
PVT1-204ENST00000517525 MAP3K19Q56UN5 1328 aa34.13■■■■□ 3.05
PVT1-204ENST00000517525 NSD3Q9BZ95 1437 aa34.13■■■■□ 3.05
PVT1-204ENST00000517525 ANKRD24Q8TF21 1146 aa34.12■■■■□ 3.05
PVT1-204ENST00000517525 DDB1Q16531 1140 aa34.1■■■■□ 3.05
PVT1-204ENST00000517525 DEFB132Q7Z7B7 95 aa34.1■■■■□ 3.05
PVT1-204ENST00000517525 RTL1A6NKG5 1358 aa34.1■■■■□ 3.05
PVT1-204ENST00000517525 BAG6P46379 1132 aa34.09■■■■□ 3.05
PVT1-204ENST00000517525 HOXC9P31274 260 aa34.07■■■■□ 3.04
PVT1-204ENST00000517525 CGNL1Q0VF96 1302 aa34.06■■■■□ 3.04
PVT1-204ENST00000517525 NLRP2Q9NX02 1062 aa34.06■■■■□ 3.04
PVT1-204ENST00000517525 RGPD1P0DJD0 1748 aa34.06■■■■□ 3.04
PVT1-204ENST00000517525 KIF24Q5T7B8 1368 aa34.06■■■■□ 3.04
PVT1-204ENST00000517525 BCL9O00512 1426 aa34.05■■■■□ 3.04
PVT1-204ENST00000517525 LRRC37A3O60309 1634 aa34.05■■■■□ 3.04
PVT1-204ENST00000517525 FBLN1P23142 703 aa34.05■■■■□ 3.04
PVT1-204ENST00000517525 AMPHP49418 695 aa34.05■■■■□ 3.04
PVT1-204ENST00000517525 WNK3Q9BYP7 1800 aa34.04■■■■□ 3.04
PVT1-204ENST00000517525 KIF20BQ96Q89 1820 aa34.04■■■■□ 3.04
PVT1-204ENST00000517525 OVOS2A0A0G2JMS6 1433 aa34.04■■■■□ 3.04
PVT1-204ENST00000517525 POLR3GLQ9BT43 218 aa34.02■■■■□ 3.04
PVT1-204ENST00000517525 EXOC5O00471 708 aa34.01■■■■□ 3.03
PVT1-204ENST00000517525 TRIM37O94972 964 aa34.01■■■■□ 3.03
PVT1-204ENST00000517525 PEAK1Q9H792 1746 aa34.01■■■■□ 3.03
PVT1-204ENST00000517525 RRS1Q15050 365 aaKnown RBP34■■■■□ 3.03
PVT1-204ENST00000517525 IL2RBP14784 551 aa33.99■■■■□ 3.03
PVT1-204ENST00000517525 MARCH10Q8NA82 808 aaPredicted RBP33.99■■■■□ 3.03
PVT1-204ENST00000517525 PANK3Q9H999 370 aa33.98■■■■□ 3.03
PVT1-204ENST00000517525 TNS1Q9HBL0 1735 aaKnown RBP33.98■■■■□ 3.03
PVT1-204ENST00000517525 FAM208AQ9UK61 1670 aaKnown RBP33.97■■■■□ 3.03
PVT1-204ENST00000517525 TNS2Q63HR2 1409 aa33.96■■■■□ 3.03
PVT1-204ENST00000517525 PARD3Q8TEW0 1356 aa33.96■■■■□ 3.03
PVT1-204ENST00000517525 EN1Q05925 392 aaPredicted RBP33.95■■■■□ 3.03
PVT1-204ENST00000517525 INSRP06213 1382 aa33.95■■■■□ 3.02
PVT1-204ENST00000517525 CAMKK2Q96RR4 588 aa33.94■■■■□ 3.02
PVT1-204ENST00000517525 FLT4P35916 1363 aa33.94■■■■□ 3.02
PVT1-204ENST00000517525 LTV1Q96GA3 475 aaPredicted RBP33.93■■■■□ 3.02
PVT1-204ENST00000517525 APBA3O96018 575 aa33.92■■■■□ 3.02
PVT1-204ENST00000517525 NSD2O96028 1365 aa33.91■■■■□ 3.02
PVT1-204ENST00000517525 KIF7Q2M1P5 1343 aa33.91■■■■□ 3.02
PVT1-204ENST00000517525 HSP90AB2PQ58FF8 381 aa33.89■■■■□ 3.02
PVT1-204ENST00000517525 BCL11BQ9C0K0 894 aaPredicted RBP33.89■■■■□ 3.02
PVT1-204ENST00000517525 SMG6Q86US8 1419 aaKnown RBP33.87■■■■□ 3.01
PVT1-204ENST00000517525 EZH2Q15910 746 aaKnown RBP33.86■■■■□ 3.01
PVT1-204ENST00000517525 EMILIN1Q9Y6C2 1016 aa33.86■■■■□ 3.01
PVT1-204ENST00000517525 WASHC2AQ641Q2 1341 aa33.85■■■■□ 3.01
PVT1-204ENST00000517525 NBPF6Q5VWK0 638 aa33.85■■■■□ 3.01
PVT1-204ENST00000517525 NBPF4Q96M43 638 aa33.85■■■■□ 3.01
PVT1-204ENST00000517525 PLSCR1O15162 318 aa33.83■■■■□ 3.01
PVT1-204ENST00000517525 POLKQ9UBT6 870 aa33.83■■■■□ 3.01
PVT1-204ENST00000517525 ANKRD26Q9UPS8 1709 aa33.82■■■■□ 3
PVT1-204ENST00000517525 SBF2Q86WG5 1849 aa33.82■■■■□ 3
PVT1-204ENST00000517525 KNSTRNQ9Y448 316 aa33.81■■■■□ 3
PVT1-204ENST00000517525 NCAPD2Q15021 1401 aa33.77■■■■□ 3
PVT1-204ENST00000517525 PTF1AQ7RTS3 328 aa33.76■■■□□ 2.99
PVT1-204ENST00000517525 AMER1Q5JTC6 1135 aaPredicted RBP33.75■■■□□ 2.99
PVT1-204ENST00000517525 MEGF6O75095 1541 aa33.74■■■□□ 2.99
PVT1-204ENST00000517525 PER1O15534 1290 aaPredicted RBP33.74■■■□□ 2.99
PVT1-204ENST00000517525 ZCRB1Q8TBF4 217 aaKnown RBP33.74■■■□□ 2.99
PVT1-204ENST00000517525 RGPD3A6NKT7 1758 aaPredicted RBP33.74■■■□□ 2.99
PVT1-204ENST00000517525 RGPD2P0DJD1 1756 aa33.74■■■□□ 2.99
PVT1-204ENST00000517525 RGPD4Q7Z3J3 1758 aa33.74■■■□□ 2.99
PVT1-204ENST00000517525 MAP2P11137 1827 aaKnown RBP33.72■■■□□ 2.99
PVT1-204ENST00000517525 RREB1Q92766 1687 aa33.72■■■□□ 2.99
PVT1-204ENST00000517525 PPM1GO15355 546 aaPredicted RBP33.72■■■□□ 2.99
PVT1-204ENST00000517525 RAPGEF4Q8WZA2 1011 aa33.72■■■□□ 2.99
PVT1-204ENST00000517525 MORC1Q86VD1 984 aa33.71■■■□□ 2.99
PVT1-204ENST00000517525 SRCAPQ6ZRS2 3230 aa33.71■■■□□ 2.99
PVT1-204ENST00000517525 USHBP1Q8N6Y0 703 aa33.7■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms