RNA–Protein interactions for RNA: ENST00000517502.5

IKBKB-204, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, human

TSL 3

Gene IKBKB, Length 498 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IKBKB-204	ENST00000517502	RGPD1	P0DJD0	1748 aa		13.78	□□□□□ -0.2
IKBKB-204	ENST00000517502	DDX10	Q13206	875 aa	Known RBP	13.78	□□□□□ -0.2
IKBKB-204	ENST00000517502	CCDC9	Q9Y3X0	531 aa	Known RBP	13.78	□□□□□ -0.2
IKBKB-204	ENST00000517502	USP19	O94966	1318 aa		13.78	□□□□□ -0.2
IKBKB-204	ENST00000517502	FAM83G	A6ND36	823 aa		13.77	□□□□□ -0.21
IKBKB-204	ENST00000517502	AMPH	P49418	695 aa		13.77	□□□□□ -0.21
IKBKB-204	ENST00000517502	CAMTA1	Q9Y6Y1	1673 aa		13.77	□□□□□ -0.21
IKBKB-204	ENST00000517502	NSD2	O96028	1365 aa		13.76	□□□□□ -0.21
IKBKB-204	ENST00000517502	KIAA0232	Q92628	1395 aa		13.76	□□□□□ -0.21
IKBKB-204	ENST00000517502	TNNT2	P45379	298 aa	Predicted RBP	13.76	□□□□□ -0.21
IKBKB-204	ENST00000517502	CHRNA2	Q15822	529 aa		13.76	□□□□□ -0.21
IKBKB-204	ENST00000517502	BTG4	Q9NY30	223 aa		13.76	□□□□□ -0.21
IKBKB-204	ENST00000517502	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.76	□□□□□ -0.21
IKBKB-204	ENST00000517502	KCNQ2	O43526	872 aa		13.75	□□□□□ -0.21
IKBKB-204	ENST00000517502	CC2D1B	Q5T0F9	858 aa	Known RBP	13.75	□□□□□ -0.21
IKBKB-204	ENST00000517502	AKAP12	Q02952	1782 aa		13.75	□□□□□ -0.21
IKBKB-204	ENST00000517502	SLIT2	O94813	1529 aa		13.74	□□□□□ -0.21
IKBKB-204	ENST00000517502	PPM1G	O15355	546 aa	Predicted RBP	13.74	□□□□□ -0.21
IKBKB-204	ENST00000517502	CSB-PGBD3	P0DP91	1061 aa		13.74	□□□□□ -0.21
IKBKB-204	ENST00000517502	STRN4	Q9NRL3	753 aa		13.74	□□□□□ -0.21
IKBKB-204	ENST00000517502	MON2	Q7Z3U7	1717 aa		13.73	□□□□□ -0.21
IKBKB-204	ENST00000517502	CPD	O75976	1380 aa		13.73	□□□□□ -0.21
IKBKB-204	ENST00000517502	PARD3	Q8TEW0	1356 aa		13.73	□□□□□ -0.21
IKBKB-204	ENST00000517502	ALS2	Q96Q42	1657 aa		13.73	□□□□□ -0.21
IKBKB-204	ENST00000517502	PER1	O15534	1290 aa	Predicted RBP	13.73	□□□□□ -0.21
IKBKB-204	ENST00000517502	EZH2	Q15910	746 aa	Known RBP	13.73	□□□□□ -0.21
IKBKB-204	ENST00000517502	ARHGEF25	Q86VW2	580 aa		13.73	□□□□□ -0.21
IKBKB-204	ENST00000517502	UTRN	P46939	3433 aa		13.73	□□□□□ -0.21
IKBKB-204	ENST00000517502	VPS72	Q15906	364 aa		13.72	□□□□□ -0.21
IKBKB-204	ENST00000517502	RRS1	Q15050	365 aa	Known RBP	13.71	□□□□□ -0.21
IKBKB-204	ENST00000517502	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.71	□□□□□ -0.21
IKBKB-204	ENST00000517502	NBPF14	Q5TI25	921 aa		13.71	□□□□□ -0.21
IKBKB-204	ENST00000517502	CAMKK2	Q96RR4	588 aa		13.71	□□□□□ -0.21
IKBKB-204	ENST00000517502	OVOS2	A0A0J9YW53	1432 aa		13.71	□□□□□ -0.22
IKBKB-204	ENST00000517502	OVOS2	Q6IE36	1432 aa		13.71	□□□□□ -0.22
IKBKB-204	ENST00000517502	AATK	Q6ZMQ8	1374 aa		13.71	□□□□□ -0.22
IKBKB-204	ENST00000517502	MYOM1	P52179	1685 aa		13.7	□□□□□ -0.22
IKBKB-204	ENST00000517502	IP6K1	Q92551	441 aa		13.7	□□□□□ -0.22
IKBKB-204	ENST00000517502	PIK3C2A	O00443	1686 aa		13.69	□□□□□ -0.22
IKBKB-204	ENST00000517502	TOM1L2	Q6ZVM7	507 aa		13.69	□□□□□ -0.22
IKBKB-204	ENST00000517502	NRK	Q7Z2Y5	1582 aa		13.69	□□□□□ -0.22
IKBKB-204	ENST00000517502	SLIT3	O75094	1523 aa		13.69	□□□□□ -0.22
IKBKB-204	ENST00000517502	MAP3K19	Q56UN5	1328 aa		13.68	□□□□□ -0.22
IKBKB-204	ENST00000517502		A0A0G2JS52	829 aa		13.68	□□□□□ -0.22
IKBKB-204	ENST00000517502	FBLN1	P23142	703 aa		13.68	□□□□□ -0.22
IKBKB-204	ENST00000517502	MYT1	Q01538	1121 aa		13.68	□□□□□ -0.22
IKBKB-204	ENST00000517502	LTV1	Q96GA3	475 aa	Predicted RBP	13.68	□□□□□ -0.22
IKBKB-204	ENST00000517502	NPC1L1	Q9UHC9	1359 aa		13.68	□□□□□ -0.22
IKBKB-204	ENST00000517502	ANKRD24	Q8TF21	1146 aa		13.67	□□□□□ -0.22
IKBKB-204	ENST00000517502	USP35	Q9P2H5	1018 aa		13.67	□□□□□ -0.22
IKBKB-204	ENST00000517502	TNS1	Q9HBL0	1735 aa	Known RBP	13.67	□□□□□ -0.22
IKBKB-204	ENST00000517502	HOXC9	P31274	260 aa		13.66	□□□□□ -0.22
IKBKB-204	ENST00000517502	NLRP2	Q9NX02	1062 aa		13.66	□□□□□ -0.22
IKBKB-204	ENST00000517502	POLK	Q9UBT6	870 aa		13.66	□□□□□ -0.22
IKBKB-204	ENST00000517502	AXIN2	Q9Y2T1	843 aa		13.66	□□□□□ -0.22
IKBKB-204	ENST00000517502	SMG6	Q86US8	1419 aa	Known RBP	13.65	□□□□□ -0.22
IKBKB-204	ENST00000517502	RALBP1	Q15311	655 aa		13.65	□□□□□ -0.22
IKBKB-204	ENST00000517502	CFAP53	Q96M91	514 aa		13.65	□□□□□ -0.22
IKBKB-204	ENST00000517502	EMILIN1	Q9Y6C2	1016 aa		13.65	□□□□□ -0.22
IKBKB-204	ENST00000517502	KIF24	Q5T7B8	1368 aa		13.65	□□□□□ -0.22
IKBKB-204	ENST00000517502	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.64	□□□□□ -0.23
IKBKB-204	ENST00000517502	COL14A1	Q05707	1796 aa	Known RBP	13.64	□□□□□ -0.23
IKBKB-204	ENST00000517502	RTL1	A6NKG5	1358 aa		13.64	□□□□□ -0.23
IKBKB-204	ENST00000517502	FLT4	P35916	1363 aa		13.64	□□□□□ -0.23
IKBKB-204	ENST00000517502	PRELP	P51888	382 aa		13.64	□□□□□ -0.23
IKBKB-204	ENST00000517502	LARP1	Q6PKG0	1096 aa	Known RBP	13.64	□□□□□ -0.23
IKBKB-204	ENST00000517502	THRAP3	Q9Y2W1	955 aa	Known RBP	13.64	□□□□□ -0.23
IKBKB-204	ENST00000517502	WDR17	Q8IZU2	1322 aa		13.64	□□□□□ -0.23
IKBKB-204	ENST00000517502	ANP32C	O43423	234 aa		13.63	□□□□□ -0.23
IKBKB-204	ENST00000517502	MTHFS	P49914	203 aa		13.63	□□□□□ -0.23
IKBKB-204	ENST00000517502	HSP90AB2P	Q58FF8	381 aa		13.63	□□□□□ -0.23
IKBKB-204	ENST00000517502	TCP11L2	Q8N4U5	519 aa		13.63	□□□□□ -0.23
IKBKB-204	ENST00000517502	KIF20B	Q96Q89	1820 aa		13.62	□□□□□ -0.23
IKBKB-204	ENST00000517502	HSPA6	P17066	643 aa		13.62	□□□□□ -0.23
IKBKB-204	ENST00000517502	CARD10	Q9BWT7	1032 aa		13.62	□□□□□ -0.23
IKBKB-204	ENST00000517502	NFAT5	O94916	1531 aa		13.62	□□□□□ -0.23
IKBKB-204	ENST00000517502	SPATA31A5	Q5VU36	1347 aa		13.62	□□□□□ -0.23
IKBKB-204	ENST00000517502	SPATA31A7	Q8IWB4	1347 aa		13.62	□□□□□ -0.23
IKBKB-204	ENST00000517502	INSR	P06213	1382 aa		13.61	□□□□□ -0.23
IKBKB-204	ENST00000517502	RREB1	Q92766	1687 aa		13.61	□□□□□ -0.23
IKBKB-204	ENST00000517502	FAM98C	Q17RN3	349 aa	Known RBP	13.61	□□□□□ -0.23
IKBKB-204	ENST00000517502	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.61	□□□□□ -0.23
IKBKB-204	ENST00000517502	ERBB3	P21860	1342 aa		13.61	□□□□□ -0.23
IKBKB-204	ENST00000517502	SPATA31A1	Q5TZJ5	1347 aa		13.61	□□□□□ -0.23
IKBKB-204	ENST00000517502	CRB1	P82279	1406 aa		13.6	□□□□□ -0.23
IKBKB-204	ENST00000517502	ABCA3	Q99758	1704 aa		13.6	□□□□□ -0.23
IKBKB-204	ENST00000517502	NWD2	Q9ULI1	1742 aa		13.6	□□□□□ -0.23
IKBKB-204	ENST00000517502	NUDC	Q9Y266	331 aa		13.6	□□□□□ -0.23
IKBKB-204	ENST00000517502	CAPN15	O75808	1086 aa		13.59	□□□□□ -0.23
IKBKB-204	ENST00000517502	PPP2R1A	P30153	589 aa		13.59	□□□□□ -0.23
IKBKB-204	ENST00000517502	COL5A2	P05997	1499 aa	Predicted RBP	13.59	□□□□□ -0.23
IKBKB-204	ENST00000517502	USP54	Q70EL1	1684 aa		13.59	□□□□□ -0.23
IKBKB-204	ENST00000517502	ABCC6	O95255	1503 aa		13.59	□□□□□ -0.23
IKBKB-204	ENST00000517502	NUP188	Q5SRE5	1749 aa		13.59	□□□□□ -0.23
IKBKB-204	ENST00000517502	DIAPH1	O60610	1272 aa	Known RBP	13.58	□□□□□ -0.24
IKBKB-204	ENST00000517502	APBA3	O96018	575 aa		13.58	□□□□□ -0.24
IKBKB-204	ENST00000517502	PDE3B	Q13370	1112 aa		13.58	□□□□□ -0.24
IKBKB-204	ENST00000517502	BARGIN	Q6ZT62	677 aa		13.58	□□□□□ -0.24
IKBKB-204	ENST00000517502	RAPGEF4	Q8WZA2	1011 aa		13.58	□□□□□ -0.24
IKBKB-204	ENST00000517502	CRYBG1	Q9Y4K1	1723 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms