RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 STK32BQ9NY57 414 aa10.43□□□□□ -0.74
TNFRSF11B-202ENST00000517352 ABCA3Q99758 1704 aa10.43□□□□□ -0.74
TNFRSF11B-202ENST00000517352 OVOS2A0A0G2JMS6 1433 aa10.42□□□□□ -0.74
TNFRSF11B-202ENST00000517352 OVOS2A0A0J9YW53 1432 aa10.42□□□□□ -0.74
TNFRSF11B-202ENST00000517352 DISP2A7MBM2 1401 aa10.42□□□□□ -0.74
TNFRSF11B-202ENST00000517352 OVOS2Q6IE36 1432 aa10.42□□□□□ -0.74
TNFRSF11B-202ENST00000517352 AATKQ6ZMQ8 1374 aa10.42□□□□□ -0.74
TNFRSF11B-202ENST00000517352 RGPD1P0DJD0 1748 aa10.42□□□□□ -0.74
TNFRSF11B-202ENST00000517352 CARD11Q9BXL7 1154 aa10.42□□□□□ -0.74
TNFRSF11B-202ENST00000517352 NLRP2Q9NX02 1062 aa10.42□□□□□ -0.74
TNFRSF11B-202ENST00000517352 USP6P35125 1406 aa10.41□□□□□ -0.74
TNFRSF11B-202ENST00000517352 NRAPQ86VF7 1730 aa10.41□□□□□ -0.74
TNFRSF11B-202ENST00000517352 KTN1Q86UP2 1357 aaKnown RBP10.41□□□□□ -0.74
TNFRSF11B-202ENST00000517352 TTC21BQ7Z4L5 1316 aa10.41□□□□□ -0.74
TNFRSF11B-202ENST00000517352 WDR17Q8IZU2 1322 aa10.41□□□□□ -0.74
TNFRSF11B-202ENST00000517352 TTC21AQ8NDW8 1320 aa10.41□□□□□ -0.74
TNFRSF11B-202ENST00000517352 SLC4A2P04920 1241 aa10.41□□□□□ -0.74
TNFRSF11B-202ENST00000517352 CAMTA1Q9Y6Y1 1673 aa10.41□□□□□ -0.74
TNFRSF11B-202ENST00000517352 PLSCR1O15162 318 aa10.4□□□□□ -0.74
TNFRSF11B-202ENST00000517352 CARD10Q9BWT7 1032 aa10.4□□□□□ -0.74
TNFRSF11B-202ENST00000517352 TERF2IPQ9NYB0 399 aa10.4□□□□□ -0.74
TNFRSF11B-202ENST00000517352 ARHGEF28Q8N1W1 1705 aaKnown RBP10.4□□□□□ -0.74
TNFRSF11B-202ENST00000517352 COL5A2P05997 1499 aaPredicted RBP10.4□□□□□ -0.74
TNFRSF11B-202ENST00000517352 ARHGEF25Q86VW2 580 aa10.39□□□□□ -0.75
TNFRSF11B-202ENST00000517352 AXIN2Q9Y2T1 843 aa10.39□□□□□ -0.75
TNFRSF11B-202ENST00000517352 LRP5O75197 1615 aa10.38□□□□□ -0.75
TNFRSF11B-202ENST00000517352 ZBTB7AO95365 584 aa10.38□□□□□ -0.75
TNFRSF11B-202ENST00000517352 TONSLQ96HA7 1378 aa10.38□□□□□ -0.75
TNFRSF11B-202ENST00000517352 THSD7AQ9UPZ6 1657 aa10.38□□□□□ -0.75
TNFRSF11B-202ENST00000517352 PHRF1Q9P1Y6 1649 aaKnown RBP10.37□□□□□ -0.75
TNFRSF11B-202ENST00000517352 CAPN15O75808 1086 aa10.37□□□□□ -0.75
TNFRSF11B-202ENST00000517352 NRKQ7Z2Y5 1582 aa10.37□□□□□ -0.75
TNFRSF11B-202ENST00000517352 MARCH10Q8NA82 808 aaPredicted RBP10.37□□□□□ -0.75
TNFRSF11B-202ENST00000517352 ACSBG1Q96GR2 724 aa10.37□□□□□ -0.75
TNFRSF11B-202ENST00000517352 ATF5Q9Y2D1 282 aaPredicted RBP10.37□□□□□ -0.75
TNFRSF11B-202ENST00000517352 CCDC7Q96M83 1385 aa10.37□□□□□ -0.75
TNFRSF11B-202ENST00000517352 IL2RBP14784 551 aa10.36□□□□□ -0.75
TNFRSF11B-202ENST00000517352 TXNRD1Q16881 649 aa10.36□□□□□ -0.75
TNFRSF11B-202ENST00000517352 KLHL34Q8N239 644 aa10.36□□□□□ -0.75
TNFRSF11B-202ENST00000517352 SYTL4Q96C24 671 aaPredicted RBP10.36□□□□□ -0.75
TNFRSF11B-202ENST00000517352 LTV1Q96GA3 475 aaPredicted RBP10.36□□□□□ -0.75
TNFRSF11B-202ENST00000517352 KIAA1210Q9ULL0 1709 aa10.36□□□□□ -0.75
TNFRSF11B-202ENST00000517352 CPSF1Q10570 1443 aaKnown RBP10.35□□□□□ -0.75
TNFRSF11B-202ENST00000517352 DDX54Q8TDD1 881 aaKnown RBP10.35□□□□□ -0.75
TNFRSF11B-202ENST00000517352 ANKRD24Q8TF21 1146 aa10.35□□□□□ -0.75
TNFRSF11B-202ENST00000517352 AMPHP49418 695 aa10.34□□□□□ -0.75
TNFRSF11B-202ENST00000517352 SLC15A2Q16348 729 aa10.34□□□□□ -0.75
TNFRSF11B-202ENST00000517352 NME9Q86XW9 330 aa10.34□□□□□ -0.75
TNFRSF11B-202ENST00000517352 COG3Q96JB2 828 aa10.34□□□□□ -0.75
TNFRSF11B-202ENST00000517352 NINLQ9Y2I6 1382 aa10.34□□□□□ -0.75
TNFRSF11B-202ENST00000517352 SLC12A5Q9H2X9 1139 aa10.33□□□□□ -0.76
TNFRSF11B-202ENST00000517352 TOPAZ1Q8N9V7 1692 aa10.32□□□□□ -0.76
TNFRSF11B-202ENST00000517352 QRICH2Q9H0J4 1663 aa10.32□□□□□ -0.76
TNFRSF11B-202ENST00000517352 POLD1P28340 1107 aa10.32□□□□□ -0.76
TNFRSF11B-202ENST00000517352 PTF1AQ7RTS3 328 aa10.32□□□□□ -0.76
TNFRSF11B-202ENST00000517352 PELP1Q8IZL8 1130 aaKnown RBP10.32□□□□□ -0.76
TNFRSF11B-202ENST00000517352 MTFR1LQ9H019 292 aa10.32□□□□□ -0.76
TNFRSF11B-202ENST00000517352 SPINK5Q9NQ38 1064 aaPredicted RBP10.32□□□□□ -0.76
TNFRSF11B-202ENST00000517352 CRYBG1Q9Y4K1 1723 aa10.31□□□□□ -0.76
TNFRSF11B-202ENST00000517352 ANO8Q9HCE9 1232 aaPredicted RBP10.31□□□□□ -0.76
TNFRSF11B-202ENST00000517352 TNS1Q9HBL0 1735 aaKnown RBP10.3□□□□□ -0.76
TNFRSF11B-202ENST00000517352 SLIT3O75094 1523 aa10.3□□□□□ -0.76
TNFRSF11B-202ENST00000517352 GPR162Q16538 588 aa10.3□□□□□ -0.76
TNFRSF11B-202ENST00000517352 ARXQ96QS3 562 aa10.3□□□□□ -0.76
TNFRSF11B-202ENST00000517352 TFCP2L1Q9NZI6 479 aa10.3□□□□□ -0.76
TNFRSF11B-202ENST00000517352 ERBB3P21860 1342 aa10.3□□□□□ -0.76
TNFRSF11B-202ENST00000517352 LMO7Q8WWI1 1683 aa10.29□□□□□ -0.76
TNFRSF11B-202ENST00000517352 HMGB2P26583 209 aaKnown RBP10.29□□□□□ -0.76
TNFRSF11B-202ENST00000517352 PROM2Q8N271 834 aa10.29□□□□□ -0.76
TNFRSF11B-202ENST00000517352 FHDC1Q9C0D6 1143 aaPredicted RBP10.29□□□□□ -0.76
TNFRSF11B-202ENST00000517352 TRPM1Q7Z4N2 1603 aa10.29□□□□□ -0.76
TNFRSF11B-202ENST00000517352 RAPGEF4Q8WZA2 1011 aa10.28□□□□□ -0.76
TNFRSF11B-202ENST00000517352 IP6K1Q92551 441 aa10.28□□□□□ -0.76
TNFRSF11B-202ENST00000517352 SYT17Q9BSW7 474 aa10.28□□□□□ -0.76
TNFRSF11B-202ENST00000517352 PDGFDQ9GZP0 370 aaPredicted RBP10.28□□□□□ -0.76
TNFRSF11B-202ENST00000517352 USP31Q70CQ4 1352 aa10.27□□□□□ -0.76
TNFRSF11B-202ENST00000517352 TNS2Q63HR2 1409 aa10.27□□□□□ -0.77
TNFRSF11B-202ENST00000517352 ST20-MTHFSA0A0A6YYL1 179 aa10.27□□□□□ -0.77
TNFRSF11B-202ENST00000517352 TMF1P82094 1093 aa10.27□□□□□ -0.77
TNFRSF11B-202ENST00000517352 CDCA8Q53HL2 280 aa10.27□□□□□ -0.77
TNFRSF11B-202ENST00000517352 SLC27A3Q5K4L6 730 aa10.27□□□□□ -0.77
TNFRSF11B-202ENST00000517352 PARP4Q9UKK3 1724 aaKnown RBP10.27□□□□□ -0.77
TNFRSF11B-202ENST00000517352 BCL9O00512 1426 aa10.26□□□□□ -0.77
TNFRSF11B-202ENST00000517352 EDC4Q6P2E9 1401 aaKnown RBP10.26□□□□□ -0.77
TNFRSF11B-202ENST00000517352 DSG3P32926 999 aa10.26□□□□□ -0.77
TNFRSF11B-202ENST00000517352 PRIM1P49642 420 aaKnown RBP10.26□□□□□ -0.77
TNFRSF11B-202ENST00000517352 SAMD1Q6SPF0 538 aaPredicted RBP10.26□□□□□ -0.77
TNFRSF11B-202ENST00000517352 ZCRB1Q8TBF4 217 aaKnown RBP10.26□□□□□ -0.77
TNFRSF11B-202ENST00000517352 PUS7Q96PZ0 661 aaKnown RBP10.26□□□□□ -0.77
TNFRSF11B-202ENST00000517352 SBNO2Q9Y2G9 1366 aa10.26□□□□□ -0.77
TNFRSF11B-202ENST00000517352 SMG6Q86US8 1419 aaKnown RBP10.25□□□□□ -0.77
TNFRSF11B-202ENST00000517352 PPM1GO15355 546 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF11B-202ENST00000517352 TATP17735 454 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF11B-202ENST00000517352 PTGER2P43116 358 aa10.25□□□□□ -0.77
TNFRSF11B-202ENST00000517352 SLC16A10Q8TF71 515 aa10.25□□□□□ -0.77
TNFRSF11B-202ENST00000517352 POLR3GLQ9BT43 218 aa10.25□□□□□ -0.77
TNFRSF11B-202ENST00000517352 A0A1W2PP64 1363 aa10.25□□□□□ -0.77
TNFRSF11B-202ENST00000517352 PIK3C2AO00443 1686 aa10.25□□□□□ -0.77
TNFRSF11B-202ENST00000517352 ZNF219Q9P2Y4 722 aaPredicted RBP10.24□□□□□ -0.77
TNFRSF11B-202ENST00000517352 CCNL1Q9UK58 526 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms