RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 ABCC6O95255 1503 aa20.84■□□□□ 0.93
SCARNA20.5-201ENST00000516991 MON2Q7Z3U7 1717 aa20.84■□□□□ 0.93
SCARNA20.5-201ENST00000516991 PEAK1Q9H792 1746 aa20.83■□□□□ 0.92
SCARNA20.5-201ENST00000516991 WDR17Q8IZU2 1322 aa20.82■□□□□ 0.92
SCARNA20.5-201ENST00000516991 TOM1L2Q6ZVM7 507 aa20.82■□□□□ 0.92
SCARNA20.5-201ENST00000516991 KTN1Q86UP2 1357 aaKnown RBP20.82■□□□□ 0.92
SCARNA20.5-201ENST00000516991 RGPD3A6NKT7 1758 aaPredicted RBP20.82■□□□□ 0.92
SCARNA20.5-201ENST00000516991 RGPD4Q7Z3J3 1758 aa20.82■□□□□ 0.92
SCARNA20.5-201ENST00000516991 NFAT5O94916 1531 aa20.81■□□□□ 0.92
SCARNA20.5-201ENST00000516991 ARHGEF25Q86VW2 580 aa20.8■□□□□ 0.92
SCARNA20.5-201ENST00000516991 CDCA7Q9BWT1 371 aaPredicted RBP20.8■□□□□ 0.92
SCARNA20.5-201ENST00000516991 USP54Q70EL1 1684 aa20.8■□□□□ 0.92
SCARNA20.5-201ENST00000516991 DDB1Q16531 1140 aa20.79■□□□□ 0.92
SCARNA20.5-201ENST00000516991 SBF2Q86WG5 1849 aa20.78■□□□□ 0.92
SCARNA20.5-201ENST00000516991 RGPD5Q99666 1765 aa20.78■□□□□ 0.92
SCARNA20.5-201ENST00000516991 NBPF14Q5TI25 921 aa20.78■□□□□ 0.92
SCARNA20.5-201ENST00000516991 CARD11Q9BXL7 1154 aa20.77■□□□□ 0.92
SCARNA20.5-201ENST00000516991 AXIN2Q9Y2T1 843 aa20.76■□□□□ 0.91
SCARNA20.5-201ENST00000516991 BCL9O00512 1426 aa20.76■□□□□ 0.91
SCARNA20.5-201ENST00000516991 USP31Q70CQ4 1352 aa20.75■□□□□ 0.91
SCARNA20.5-201ENST00000516991 TONSLQ96HA7 1378 aa20.75■□□□□ 0.91
SCARNA20.5-201ENST00000516991 CARD10Q9BWT7 1032 aa20.75■□□□□ 0.91
SCARNA20.5-201ENST00000516991 CCDC7Q96M83 1385 aa20.74■□□□□ 0.91
SCARNA20.5-201ENST00000516991 SOX12O15370 315 aa20.74■□□□□ 0.91
SCARNA20.5-201ENST00000516991 CSB-PGBD3P0DP91 1061 aa20.74■□□□□ 0.91
SCARNA20.5-201ENST00000516991 CD163L1Q9NR16 1453 aa20.72■□□□□ 0.91
SCARNA20.5-201ENST00000516991 EDC4Q6P2E9 1401 aaKnown RBP20.71■□□□□ 0.91
SCARNA20.5-201ENST00000516991 PLSCR1O15162 318 aa20.71■□□□□ 0.91
SCARNA20.5-201ENST00000516991 HDGFL2Q7Z4V5 671 aaPredicted RBP20.71■□□□□ 0.91
SCARNA20.5-201ENST00000516991 BCL11BQ9C0K0 894 aaPredicted RBP20.71■□□□□ 0.91
SCARNA20.5-201ENST00000516991 TNS2Q63HR2 1409 aa20.7■□□□□ 0.9
SCARNA20.5-201ENST00000516991 LTN1O94822 1766 aa20.69■□□□□ 0.9
SCARNA20.5-201ENST00000516991 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.69■□□□□ 0.9
SCARNA20.5-201ENST00000516991 PUS7Q96PZ0 661 aaKnown RBP20.69■□□□□ 0.9
SCARNA20.5-201ENST00000516991 MARCH10Q8NA82 808 aaPredicted RBP20.68■□□□□ 0.9
SCARNA20.5-201ENST00000516991 TMC1Q8TDI8 760 aa20.68■□□□□ 0.9
SCARNA20.5-201ENST00000516991 TERF2IPQ9NYB0 399 aa20.68■□□□□ 0.9
SCARNA20.5-201ENST00000516991 NINLQ9Y2I6 1382 aa20.67■□□□□ 0.9
SCARNA20.5-201ENST00000516991 EXOC5O00471 708 aa20.66■□□□□ 0.9
SCARNA20.5-201ENST00000516991 NME9Q86XW9 330 aa20.66■□□□□ 0.9
SCARNA20.5-201ENST00000516991 ERBB3P21860 1342 aa20.66■□□□□ 0.9
SCARNA20.5-201ENST00000516991 A0A1W2PP64 1363 aa20.65■□□□□ 0.9
SCARNA20.5-201ENST00000516991 SLC24A1O60721 1099 aa20.64■□□□□ 0.89
SCARNA20.5-201ENST00000516991 SLC12A5Q9H2X9 1139 aa20.64■□□□□ 0.89
SCARNA20.5-201ENST00000516991 SPON1Q9HCB6 807 aa20.64■□□□□ 0.89
SCARNA20.5-201ENST00000516991 NHSQ6T4R5 1651 aa20.63■□□□□ 0.89
SCARNA20.5-201ENST00000516991 FAM208AQ9UK61 1670 aaKnown RBP20.62■□□□□ 0.89
SCARNA20.5-201ENST00000516991 CASZ1Q86V15 1759 aa20.62■□□□□ 0.89
SCARNA20.5-201ENST00000516991 KCNQ2O43526 872 aa20.61■□□□□ 0.89
SCARNA20.5-201ENST00000516991 NLRP2Q9NX02 1062 aa20.61■□□□□ 0.89
SCARNA20.5-201ENST00000516991 PTF1AQ7RTS3 328 aa20.6■□□□□ 0.89
SCARNA20.5-201ENST00000516991 ANO8Q9HCE9 1232 aaPredicted RBP20.6■□□□□ 0.89
SCARNA20.5-201ENST00000516991 PPP1R1BQ9UD71 204 aaPredicted RBP20.6■□□□□ 0.89
SCARNA20.5-201ENST00000516991 IL2RBP14784 551 aa20.59■□□□□ 0.89
SCARNA20.5-201ENST00000516991 ANKRD24Q8TF21 1146 aa20.59■□□□□ 0.89
SCARNA20.5-201ENST00000516991 TESK2Q96S53 571 aa20.58■□□□□ 0.89
SCARNA20.5-201ENST00000516991 TXNRD1Q16881 649 aa20.56■□□□□ 0.88
SCARNA20.5-201ENST00000516991 ST20-MTHFSA0A0A6YYL1 179 aa20.55■□□□□ 0.88
SCARNA20.5-201ENST00000516991 PROM2Q8N271 834 aa20.55■□□□□ 0.88
SCARNA20.5-201ENST00000516991 STK32BQ9NY57 414 aa20.55■□□□□ 0.88
SCARNA20.5-201ENST00000516991 IP6K1Q92551 441 aa20.54■□□□□ 0.88
SCARNA20.5-201ENST00000516991 ANKRD36BQ8N2N9 1353 aa20.54■□□□□ 0.88
SCARNA20.5-201ENST00000516991 COG3Q96JB2 828 aa20.53■□□□□ 0.88
SCARNA20.5-201ENST00000516991 BTAF1O14981 1849 aa20.53■□□□□ 0.88
SCARNA20.5-201ENST00000516991 DCAF8L1A6NGE4 600 aa20.51■□□□□ 0.87
SCARNA20.5-201ENST00000516991 RTL1A6NKG5 1358 aa20.5■□□□□ 0.87
SCARNA20.5-201ENST00000516991 PAPPAQ13219 1627 aa20.5■□□□□ 0.87
SCARNA20.5-201ENST00000516991 SLC15A2Q16348 729 aa20.5■□□□□ 0.87
SCARNA20.5-201ENST00000516991 ACSBG1Q96GR2 724 aa20.5■□□□□ 0.87
SCARNA20.5-201ENST00000516991 KAT6BQ8WYB5 2073 aa20.5■□□□□ 0.87
SCARNA20.5-201ENST00000516991 USP47Q96K76 1375 aa20.49■□□□□ 0.87
SCARNA20.5-201ENST00000516991 MAP3K19Q56UN5 1328 aa20.49■□□□□ 0.87
SCARNA20.5-201ENST00000516991 TMF1P82094 1093 aa20.48■□□□□ 0.87
SCARNA20.5-201ENST00000516991 TRIM26Q12899 539 aaPredicted RBP20.48■□□□□ 0.87
SCARNA20.5-201ENST00000516991 MYOM1P52179 1685 aa20.48■□□□□ 0.87
SCARNA20.5-201ENST00000516991 HOXC9P31274 260 aa20.47■□□□□ 0.87
SCARNA20.5-201ENST00000516991 AMPHP49418 695 aa20.47■□□□□ 0.87
SCARNA20.5-201ENST00000516991 ZBTB7AO95365 584 aa20.46■□□□□ 0.87
SCARNA20.5-201ENST00000516991 LTV1Q96GA3 475 aaPredicted RBP20.46■□□□□ 0.87
SCARNA20.5-201ENST00000516991 PDGFDQ9GZP0 370 aaPredicted RBP20.46■□□□□ 0.87
SCARNA20.5-201ENST00000516991 CDCA8Q53HL2 280 aa20.45■□□□□ 0.86
SCARNA20.5-201ENST00000516991 MTFR1LQ9H019 292 aa20.45■□□□□ 0.86
SCARNA20.5-201ENST00000516991 KIF20BQ96Q89 1820 aa20.44■□□□□ 0.86
SCARNA20.5-201ENST00000516991 PTGER2P43116 358 aa20.43■□□□□ 0.86
SCARNA20.5-201ENST00000516991 DOT1LQ8TEK3 1739 aa20.43■□□□□ 0.86
SCARNA20.5-201ENST00000516991 SMG6Q86US8 1419 aaKnown RBP20.43■□□□□ 0.86
SCARNA20.5-201ENST00000516991 RGPD2P0DJD1 1756 aa20.42■□□□□ 0.86
SCARNA20.5-201ENST00000516991 YY1P25490 414 aa20.42■□□□□ 0.86
SCARNA20.5-201ENST00000516991 DDX54Q8TDD1 881 aaKnown RBP20.42■□□□□ 0.86
SCARNA20.5-201ENST00000516991 QSER1Q2KHR3 1735 aa20.41■□□□□ 0.86
SCARNA20.5-201ENST00000516991 SHANK3Q9BYB0 1731 aa20.41■□□□□ 0.86
SCARNA20.5-201ENST00000516991 SLC27A3Q5K4L6 730 aa20.41■□□□□ 0.86
SCARNA20.5-201ENST00000516991 ATF5Q9Y2D1 282 aaPredicted RBP20.41■□□□□ 0.86
SCARNA20.5-201ENST00000516991 MEGF6O75095 1541 aa20.4■□□□□ 0.86
SCARNA20.5-201ENST00000516991 KIF24Q5T7B8 1368 aa20.39■□□□□ 0.85
SCARNA20.5-201ENST00000516991 CGNL1Q0VF96 1302 aa20.39■□□□□ 0.85
SCARNA20.5-201ENST00000516991 FYB1O15117 783 aa20.39■□□□□ 0.85
SCARNA20.5-201ENST00000516991 ZCRB1Q8TBF4 217 aaKnown RBP20.38■□□□□ 0.85
SCARNA20.5-201ENST00000516991 GGNBP2Q9H3C7 697 aa20.38■□□□□ 0.85
SCARNA20.5-201ENST00000516991 RRS1Q15050 365 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms