RNA–Protein interactions for RNA: ENST00000516328.1

RNU6-1338P-201, Transcript of RNA, U6 small nuclear 1338, pseudogene, humanhuman

BASIC

Gene RNU6-1338P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1338P-201ENST00000516328 CLK2P49760 499 aaKnown RBP5.73□□□□□ -1.49
RNU6-1338P-201ENST00000516328 PTSQ03393 145 aa5.73□□□□□ -1.49
RNU6-1338P-201ENST00000516328 KRTAP4-6Q9BYQ5 205 aa5.73□□□□□ -1.49
RNU6-1338P-201ENST00000516328 PGPEP1Q9NXJ5 209 aa5.73□□□□□ -1.49
RNU6-1338P-201ENST00000516328 GSK3AP49840 483 aa5.72□□□□□ -1.49
RNU6-1338P-201ENST00000516328 CBLBQ13191 982 aa5.72□□□□□ -1.49
RNU6-1338P-201ENST00000516328 PPP1R26Q5T8A7 1209 aaPredicted RBP5.72□□□□□ -1.49
RNU6-1338P-201ENST00000516328 Q6ZVU0 165 aa5.72□□□□□ -1.49
RNU6-1338P-201ENST00000516328 KCTD17Q8N5Z5 321 aa5.72□□□□□ -1.49
RNU6-1338P-201ENST00000516328 NANOS1Q8WY41 292 aaKnown RBP5.71□□□□□ -1.5
RNU6-1338P-201ENST00000516328 COL25A1Q9BXS0 654 aaPredicted RBP5.71□□□□□ -1.5
RNU6-1338P-201ENST00000516328 RNF225M0QZC1 329 aaPredicted RBP5.7□□□□□ -1.5
RNU6-1338P-201ENST00000516328 SPINT1O43278 529 aa5.7□□□□□ -1.5
RNU6-1338P-201ENST00000516328 CTDSPL2Q05D32 466 aa5.7□□□□□ -1.5
RNU6-1338P-201ENST00000516328 SUZ12Q15022 739 aaKnown RBP5.7□□□□□ -1.5
RNU6-1338P-201ENST00000516328 PDXDC2PQ6P474 469 aa5.7□□□□□ -1.5
RNU6-1338P-201ENST00000516328 TMEM151AQ8N4L1 468 aa5.7□□□□□ -1.5
RNU6-1338P-201ENST00000516328 CCDC155Q8N6L0 562 aa5.7□□□□□ -1.5
RNU6-1338P-201ENST00000516328 KCTD15Q96SI1 283 aaPredicted RBP5.7□□□□□ -1.5
RNU6-1338P-201ENST00000516328 ARHGAP9Q9BRR9 750 aa5.7□□□□□ -1.5
RNU6-1338P-201ENST00000516328 CDV3Q9UKY7 258 aaKnown RBP5.7□□□□□ -1.5
RNU6-1338P-201ENST00000516328 ADAMTS8Q9UP79 889 aa5.7□□□□□ -1.5
RNU6-1338P-201ENST00000516328 SLC35F4A4IF30 521 aa5.69□□□□□ -1.5
RNU6-1338P-201ENST00000516328 RASSF7Q02833 373 aa5.69□□□□□ -1.5
RNU6-1338P-201ENST00000516328 DHX9Q08211 1270 aaKnown RBP5.69□□□□□ -1.5
RNU6-1338P-201ENST00000516328 SLC10A4Q96EP9 437 aa5.69□□□□□ -1.5
RNU6-1338P-201ENST00000516328 RSPH6AQ9H0K4 717 aa5.69□□□□□ -1.5
RNU6-1338P-201ENST00000516328 POLR3EQ9NVU0 708 aa5.69□□□□□ -1.5
RNU6-1338P-201ENST00000516328 GDF11O95390 407 aa5.68□□□□□ -1.5
RNU6-1338P-201ENST00000516328 RNFT1Q5M7Z0 435 aa5.68□□□□□ -1.5
RNU6-1338P-201ENST00000516328 ZNF385CQ66K41 422 aaPredicted RBP5.68□□□□□ -1.5
RNU6-1338P-201ENST00000516328 ZBTB33Q86T24 672 aa5.68□□□□□ -1.5
RNU6-1338P-201ENST00000516328 SVOPQ8N4V2 548 aa5.68□□□□□ -1.5
RNU6-1338P-201ENST00000516328 SLC24A3Q9HC58 644 aa5.68□□□□□ -1.5
RNU6-1338P-201ENST00000516328 FKBPLQ9UIM3 349 aa5.68□□□□□ -1.5
RNU6-1338P-201ENST00000516328 ITGA6P23229 1130 aa5.67□□□□□ -1.5
RNU6-1338P-201ENST00000516328 CTSOP43234 321 aaPredicted RBP5.67□□□□□ -1.5
RNU6-1338P-201ENST00000516328 RELBQ01201 579 aa5.67□□□□□ -1.5
RNU6-1338P-201ENST00000516328 INTS6LQ5JSJ4 861 aaKnown RBP5.67□□□□□ -1.5
RNU6-1338P-201ENST00000516328 LRRN4Q8WUT4 740 aa5.67□□□□□ -1.5
RNU6-1338P-201ENST00000516328 AGBL1Q96MI9 1066 aa5.67□□□□□ -1.5
RNU6-1338P-201ENST00000516328 ZC3H4Q9UPT8 1303 aaKnown RBP5.67□□□□□ -1.5
RNU6-1338P-201ENST00000516328 CDC14CA4D256 554 aa5.66□□□□□ -1.5
RNU6-1338P-201ENST00000516328 NR6A1Q15406 480 aa5.66□□□□□ -1.5
RNU6-1338P-201ENST00000516328 SV2AQ7L0J3 742 aa5.66□□□□□ -1.5
RNU6-1338P-201ENST00000516328 VWA5B2Q8N398 1253 aa5.66□□□□□ -1.5
RNU6-1338P-201ENST00000516328 INSM2Q96T92 566 aaPredicted RBP5.66□□□□□ -1.5
RNU6-1338P-201ENST00000516328 POLMQ9NP87 494 aaPredicted RBP5.66□□□□□ -1.5
RNU6-1338P-201ENST00000516328 PTK2Q05397 1052 aa5.65□□□□□ -1.5
RNU6-1338P-201ENST00000516328 WHAMMQ8TF30 809 aa5.65□□□□□ -1.5
RNU6-1338P-201ENST00000516328 SLURP2P0DP57 97 aa5.64□□□□□ -1.51
RNU6-1338P-201ENST00000516328 RNF217Q8TC41 542 aa5.64□□□□□ -1.51
RNU6-1338P-201ENST00000516328 OCSTAMPQ9BR26 566 aa5.64□□□□□ -1.51
RNU6-1338P-201ENST00000516328 ZNF395Q9H8N7 513 aaPredicted RBP5.64□□□□□ -1.51
RNU6-1338P-201ENST00000516328 TMPRSS4Q9NRS4 437 aa5.64□□□□□ -1.51
RNU6-1338P-201ENST00000516328 ARHGEF15O94989 841 aa5.63□□□□□ -1.51
RNU6-1338P-201ENST00000516328 SKIV2LQ15477 1246 aaKnown RBP5.63□□□□□ -1.51
RNU6-1338P-201ENST00000516328 ADAM32Q8TC27 787 aa5.63□□□□□ -1.51
RNU6-1338P-201ENST00000516328 GPSM3Q9Y4H4 160 aa5.63□□□□□ -1.51
RNU6-1338P-201ENST00000516328 ADH1AP07327 375 aa5.62□□□□□ -1.51
RNU6-1338P-201ENST00000516328 IRS1P35568 1242 aa5.62□□□□□ -1.51
RNU6-1338P-201ENST00000516328 MARSP56192 900 aaKnown RBP5.62□□□□□ -1.51
RNU6-1338P-201ENST00000516328 RAB15P59190 212 aa5.62□□□□□ -1.51
RNU6-1338P-201ENST00000516328 NBPF20Q3BBV1 942 aa5.62□□□□□ -1.51
RNU6-1338P-201ENST00000516328 FOXD4L5Q5VV16 416 aaPredicted RBP5.62□□□□□ -1.51
RNU6-1338P-201ENST00000516328 FBXO31Q5XUX0 539 aaPredicted RBP5.62□□□□□ -1.51
RNU6-1338P-201ENST00000516328 ZNF784Q8NCA9 323 aaPredicted RBP5.62□□□□□ -1.51
RNU6-1338P-201ENST00000516328 ATP1B4Q9UN42 357 aaPredicted RBP5.62□□□□□ -1.51
RNU6-1338P-201ENST00000516328 SENP3-EIF4A1A0A087X0R7 540 aa5.61□□□□□ -1.51
RNU6-1338P-201ENST00000516328 PPP2R2DQ66LE6 453 aa5.61□□□□□ -1.51
RNU6-1338P-201ENST00000516328 DNMT3AQ9Y6K1 912 aaPredicted RBP5.61□□□□□ -1.51
RNU6-1338P-201ENST00000516328 AP1G2O75843 785 aa5.6□□□□□ -1.51
RNU6-1338P-201ENST00000516328 ADAMTS2O95450 1211 aa5.6□□□□□ -1.51
RNU6-1338P-201ENST00000516328 ADD1P35611 737 aaKnown RBP5.6□□□□□ -1.51
RNU6-1338P-201ENST00000516328 PTGIRP43119 386 aa5.6□□□□□ -1.51
RNU6-1338P-201ENST00000516328 SH3D19Q5HYK7 790 aa5.6□□□□□ -1.51
RNU6-1338P-201ENST00000516328 LYPD4Q6UWN0 246 aa5.6□□□□□ -1.51
RNU6-1338P-201ENST00000516328 DZIP3Q86Y13 1208 aaKnown RBP5.6□□□□□ -1.51
RNU6-1338P-201ENST00000516328 PROCA1Q8NCQ7 364 aaPredicted RBP5.6□□□□□ -1.51
RNU6-1338P-201ENST00000516328 EPS8L1Q8TE68 723 aa5.6□□□□□ -1.51
RNU6-1338P-201ENST00000516328 SCARF2Q96GP6 870 aaPredicted RBP5.6□□□□□ -1.51
RNU6-1338P-201ENST00000516328 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.6□□□□□ -1.51
RNU6-1338P-201ENST00000516328 ERVH48-1M5A8F1 160 aa5.59□□□□□ -1.51
RNU6-1338P-201ENST00000516328 LILRA1O75019 489 aa5.59□□□□□ -1.51
RNU6-1338P-201ENST00000516328 MAP3K10Q02779 954 aa5.59□□□□□ -1.51
RNU6-1338P-201ENST00000516328 SRSF11Q05519 484 aaKnown RBP5.59□□□□□ -1.51
RNU6-1338P-201ENST00000516328 GPAT2Q6NUI2 795 aa5.59□□□□□ -1.51
RNU6-1338P-201ENST00000516328 KANK3Q6NY19 840 aa5.59□□□□□ -1.51
RNU6-1338P-201ENST00000516328 LYSMD3Q7Z3D4 306 aa5.59□□□□□ -1.51
RNU6-1338P-201ENST00000516328 PNMA1Q8ND90 353 aa5.59□□□□□ -1.51
RNU6-1338P-201ENST00000516328 CUEDC1Q9NWM3 386 aaPredicted RBP5.59□□□□□ -1.51
RNU6-1338P-201ENST00000516328 ESPNB1AK53 854 aa5.58□□□□□ -1.52
RNU6-1338P-201ENST00000516328 IGHA1P01876 353 aa5.58□□□□□ -1.52
RNU6-1338P-201ENST00000516328 KDF1Q8NAX2 398 aaPredicted RBP5.58□□□□□ -1.52
RNU6-1338P-201ENST00000516328 CELA2BP08218 269 aaPredicted RBP5.57□□□□□ -1.52
RNU6-1338P-201ENST00000516328 USP17L8P0C7I0 530 aa5.57□□□□□ -1.52
RNU6-1338P-201ENST00000516328 FOXK2Q01167 660 aa5.57□□□□□ -1.52
RNU6-1338P-201ENST00000516328 GAS6Q14393 721 aa5.57□□□□□ -1.52
RNU6-1338P-201ENST00000516328 HMX1Q9NP08 348 aaPredicted RBP5.57□□□□□ -1.52
RNU6-1338P-201ENST00000516328 RHOQP17081 205 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms