RNA–Protein interactions for RNA: ENST00000516183.1

SCARNA17-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 144 nt, Biotype scaRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17-201ENST00000516183 WASP42768 502 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 KRTAP12-4P60329 112 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 HNRNPKP61978 463 aaKnown RBP eCLIP-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 EGR4Q05215 589 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 SRSF11Q05519 484 aaKnown RBP-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 NFX1Q12986 1120 aaKnown RBP-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 KRT31Q15323 416 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 TJAP1Q5JTD0 557 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 Q5VSD8 79 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 HIST2H2BCQ6DN03 193 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 ZNF574Q6ZN55 896 aaPredicted RBP-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 DEFB119Q8N690 84 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 CCDC185Q8N715 623 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 SERBP1Q8NC51 408 aaKnown RBP eCLIP-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 SPATA18Q8TC71 538 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 PANK1Q8TE04 598 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 ZDHHC19Q8WVZ1 309 aaPredicted RBP-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 GRIP2Q9C0E4 1043 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 FZD8Q9H461 694 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 C14orf93Q9H972 538 aaKnown RBP-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 ABCB10Q9NRK6 738 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 TRMT1Q9NXH9 659 aaKnown RBP-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 PCDH10Q9P2E7 1040 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 ZNF214Q9UL59 606 aaPredicted RBP-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 PRR12Q9ULL5 1215 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 COLQQ9Y215 455 aaPredicted RBP-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 DMRT2Q9Y5R5 561 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 REV3LO60673 3130 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 BOD1L1Q8NFC6 3051 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 CFAP54Q96N23 3096 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 CACNA1IQ9P0X4 2223 aa-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.33□□□□□ -2.46
SCARNA17-201ENST00000516183 COL11A1P12107 1806 aaPredicted RBP-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 CELSR2Q9HCU4 2923 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 COL14A1Q05707 1796 aaKnown RBP-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 LOC100653049A0A140TA62 436 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 SRRM5B3KS81 715 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 PYCARD-AS1I3L0S3 204 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 MASP2O00187 686 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 PLSCR1O15162 318 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 KRT34O76011 436 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 ZFAND5O76080 213 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 ZIC2O95409 532 aaPredicted RBP-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 FSTP19883 344 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 FXR2P51116 673 aaKnown RBP eCLIP-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 SRSF3P84103 164 aaKnown RBP-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 SRSF2Q01130 221 aaKnown RBP-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 CIRBPQ14011 172 aaKnown RBP-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 KRT33BQ14525 404 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 AMHR2Q16671 573 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 FOXD1Q16676 465 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 EML3Q32P44 896 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 CCDC157Q569K6 752 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 MALRD1Q5VYJ5 2156 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 DLK2Q6UY11 383 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 BHLHA9Q7RTU4 235 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 OAFQ86UD1 273 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 KIF18BQ86Y91 864 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 ZNF687Q8N1G0 1237 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 MAPK1IP1LQ8NDC0 245 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 UPF1Q92900 1129 aaKnown RBP eCLIP-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP-0.34□□□□□ -2.465e-54■■□□□ 12.5
SCARNA17-201ENST00000516183 CDCA7Q9BWT1 371 aaPredicted RBP-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 LCE3DQ9BYE3 92 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 CXXC4Q9H2H0 198 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 ANO8Q9HCE9 1232 aaPredicted RBP-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 MTMR4Q9NYA4 1195 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 SERGEFQ9UGK8 458 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 ZBTB32Q9Y2Y4 487 aaPredicted RBP-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 TLL2Q9Y6L7 1015 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 ANK3Q12955 4377 aaKnown RBP-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 PKHD1L1Q86WI1 4243 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 AGRNO00468 2067 aa-0.34□□□□□ -2.46
SCARNA17-201ENST00000516183 MED13Q9UHV7 2174 aa-0.35□□□□□ -2.46
SCARNA17-201ENST00000516183 SVEP1Q4LDE5 3571 aa-0.35□□□□□ -2.46
SCARNA17-201ENST00000516183 ASTN1O14525 1302 aa-0.35□□□□□ -2.46
SCARNA17-201ENST00000516183 ZZEF1O43149 2961 aa-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 A0A1B0GTL3 188 aa-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 A0A1B0GVY2 172 aa-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 MEGF11A6BM72 1044 aa-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 OVOL3O00110 214 aa-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 WIPF1O43516 503 aa-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 SYNCRIPO60506 623 aaKnown RBP-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 KRT5P13647 590 aa-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 ADRA2BP18089 450 aa-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 HNRNPA2B1P22626 353 aaKnown RBP-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 HOXA10P31260 410 aaPredicted RBP-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 ADRA1BP35368 520 aa-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 ASIPP42127 132 aa-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 RAG2P55895 527 aa-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 TRA2BP62995 288 aaKnown RBP-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 KRT85P78386 507 aa-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 KRT76Q01546 638 aa-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 POU5F1BQ06416 359 aa-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 CBLBQ13191 982 aa-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 NFYCQ13952 458 aa-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 KRTAP13-3Q3SY46 172 aa-0.35□□□□□ -2.47
SCARNA17-201ENST00000516183 LCE3CQ5T5A8 94 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms