RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 FBLN1P23142 703 aa9.51□□□□□ -0.89
SCARNA6-201ENST00000515982 RRS1Q15050 365 aaKnown RBP9.51□□□□□ -0.89
SCARNA6-201ENST00000515982 IP6K1Q92551 441 aa9.51□□□□□ -0.89
SCARNA6-201ENST00000515982 MARF1Q9Y4F3 1742 aaKnown RBP9.51□□□□□ -0.89
SCARNA6-201ENST00000515982 KIAA0232Q92628 1395 aa9.5□□□□□ -0.89
SCARNA6-201ENST00000515982 FAM83GA6ND36 823 aa9.5□□□□□ -0.89
SCARNA6-201ENST00000515982 EVA1CP58658 441 aa9.5□□□□□ -0.89
SCARNA6-201ENST00000515982 CCDC125Q86Z20 511 aa9.5□□□□□ -0.89
SCARNA6-201ENST00000515982 USP21Q9UK80 565 aa9.5□□□□□ -0.89
SCARNA6-201ENST00000515982 NFAT5O94916 1531 aa9.5□□□□□ -0.89
SCARNA6-201ENST00000515982 PHRF1Q9P1Y6 1649 aaKnown RBP9.49□□□□□ -0.89
SCARNA6-201ENST00000515982 HOXC9P31274 260 aa9.49□□□□□ -0.89
SCARNA6-201ENST00000515982 CHRNA2Q15822 529 aa9.49□□□□□ -0.89
SCARNA6-201ENST00000515982 TRPC5Q9UL62 973 aaPredicted RBP9.49□□□□□ -0.89
SCARNA6-201ENST00000515982 NUDCQ9Y266 331 aa9.49□□□□□ -0.89
SCARNA6-201ENST00000515982 EMILIN1Q9Y6C2 1016 aa9.49□□□□□ -0.89
SCARNA6-201ENST00000515982 RTL1A6NKG5 1358 aa9.49□□□□□ -0.89
SCARNA6-201ENST00000515982 FLT4P35916 1363 aa9.49□□□□□ -0.89
SCARNA6-201ENST00000515982 CRYBG1Q9Y4K1 1723 aa9.48□□□□□ -0.89
SCARNA6-201ENST00000515982 CCER2I3L3R5 266 aa9.48□□□□□ -0.89
SCARNA6-201ENST00000515982 HSP90AB2PQ58FF8 381 aa9.48□□□□□ -0.89
SCARNA6-201ENST00000515982 FNBP4Q8N3X1 1017 aaPredicted RBP9.48□□□□□ -0.89
SCARNA6-201ENST00000515982 INSRP06213 1382 aa9.48□□□□□ -0.89
SCARNA6-201ENST00000515982 DIAPH1O60610 1272 aaKnown RBP9.47□□□□□ -0.89
SCARNA6-201ENST00000515982 MIER1Q8N108 512 aa9.47□□□□□ -0.89
SCARNA6-201ENST00000515982 BTG4Q9NY30 223 aa9.47□□□□□ -0.89
SCARNA6-201ENST00000515982 ABCA3Q99758 1704 aa9.47□□□□□ -0.89
SCARNA6-201ENST00000515982 ATRNO75882 1429 aa9.47□□□□□ -0.89
SCARNA6-201ENST00000515982 BLMP54132 1417 aaPredicted RBP9.47□□□□□ -0.89
SCARNA6-201ENST00000515982 SMG6Q86US8 1419 aaKnown RBP9.47□□□□□ -0.89
SCARNA6-201ENST00000515982 ABCC6O95255 1503 aa9.46□□□□□ -0.89
SCARNA6-201ENST00000515982 LTN1O94822 1766 aa9.46□□□□□ -0.9
SCARNA6-201ENST00000515982 COL14A1Q05707 1796 aaKnown RBP9.46□□□□□ -0.9
SCARNA6-201ENST00000515982 CSB-PGBD3P0DP91 1061 aa9.46□□□□□ -0.9
SCARNA6-201ENST00000515982 LTV1Q96GA3 475 aaPredicted RBP9.46□□□□□ -0.9
SCARNA6-201ENST00000515982 AXIN2Q9Y2T1 843 aa9.46□□□□□ -0.9
SCARNA6-201ENST00000515982 EP400Q96L91 3159 aa9.46□□□□□ -0.9
SCARNA6-201ENST00000515982 UNC5CLQ8IV45 518 aa9.45□□□□□ -0.9
SCARNA6-201ENST00000515982 ANKRD24Q8TF21 1146 aa9.45□□□□□ -0.9
SCARNA6-201ENST00000515982 MRS2Q9HD23 443 aa9.45□□□□□ -0.9
SCARNA6-201ENST00000515982 IL13P35225 146 aa9.44□□□□□ -0.9
SCARNA6-201ENST00000515982 EIF4A2Q14240 407 aaKnown RBP9.44□□□□□ -0.9
SCARNA6-201ENST00000515982 PNNQ9H307 717 aaKnown RBP9.44□□□□□ -0.9
SCARNA6-201ENST00000515982 STRN4Q9NRL3 753 aa9.44□□□□□ -0.9
SCARNA6-201ENST00000515982 COL18A1P39060 1754 aa9.44□□□□□ -0.9
SCARNA6-201ENST00000515982 CAMTA1Q9Y6Y1 1673 aa9.43□□□□□ -0.9
SCARNA6-201ENST00000515982 ERBB3P21860 1342 aa9.43□□□□□ -0.9
SCARNA6-201ENST00000515982 WDR17Q8IZU2 1322 aa9.43□□□□□ -0.9
SCARNA6-201ENST00000515982 WDR43Q15061 677 aaKnown RBP eCLIP9.43□□□□□ -0.9
SCARNA6-201ENST00000515982 TOM1L2Q6ZVM7 507 aa9.43□□□□□ -0.9
SCARNA6-201ENST00000515982 DEFB132Q7Z7B7 95 aa9.43□□□□□ -0.9
SCARNA6-201ENST00000515982 CARD10Q9BWT7 1032 aa9.43□□□□□ -0.9
SCARNA6-201ENST00000515982 NLRP2Q9NX02 1062 aa9.43□□□□□ -0.9
SCARNA6-201ENST00000515982 PEAK1Q9H792 1746 aa9.42□□□□□ -0.9
SCARNA6-201ENST00000515982 SLIT2O94813 1529 aa9.42□□□□□ -0.9
SCARNA6-201ENST00000515982 BCL9LQ86UU0 1499 aa9.42□□□□□ -0.9
SCARNA6-201ENST00000515982 U2SURPO15042 1029 aaKnown RBP9.42□□□□□ -0.9
SCARNA6-201ENST00000515982 U2AF1L5P0DN76 240 aaPredicted RBP9.42□□□□□ -0.9
SCARNA6-201ENST00000515982 U2AF1Q01081 240 aaKnown RBP eCLIP9.42□□□□□ -0.9
SCARNA6-201ENST00000515982 GJD4Q96KN9 370 aaPredicted RBP9.42□□□□□ -0.9
SCARNA6-201ENST00000515982 EYA1Q99502 592 aa9.42□□□□□ -0.9
SCARNA6-201ENST00000515982 RGPD5Q99666 1765 aa9.42□□□□□ -0.9
SCARNA6-201ENST00000515982 NWD2Q9ULI1 1742 aa9.42□□□□□ -0.9
SCARNA6-201ENST00000515982 LMO7Q8WWI1 1683 aa9.42□□□□□ -0.9
SCARNA6-201ENST00000515982 COL5A2P05997 1499 aaPredicted RBP9.41□□□□□ -0.9
SCARNA6-201ENST00000515982 VPS72Q15906 364 aa9.41□□□□□ -0.9
SCARNA6-201ENST00000515982 CCDC184Q52MB2 194 aa9.41□□□□□ -0.9
SCARNA6-201ENST00000515982 NBPF6Q5VWK0 638 aa9.41□□□□□ -0.9
SCARNA6-201ENST00000515982 LARP1Q6PKG0 1096 aaKnown RBP9.41□□□□□ -0.9
SCARNA6-201ENST00000515982 PNISRQ8TF01 805 aaKnown RBP9.41□□□□□ -0.9
SCARNA6-201ENST00000515982 NBPF4Q96M43 638 aa9.41□□□□□ -0.9
SCARNA6-201ENST00000515982 THRAP3Q9Y2W1 955 aaKnown RBP9.41□□□□□ -0.9
SCARNA6-201ENST00000515982 CCDC9Q9Y3X0 531 aaKnown RBP9.41□□□□□ -0.9
SCARNA6-201ENST00000515982 CRB1P82279 1406 aa9.4□□□□□ -0.9
SCARNA6-201ENST00000515982 IGSF1Q8N6C5 1336 aa9.4□□□□□ -0.9
SCARNA6-201ENST00000515982 FCHSD2O94868 740 aa9.4□□□□□ -0.9
SCARNA6-201ENST00000515982 NEFMP07197 916 aa9.4□□□□□ -0.9
SCARNA6-201ENST00000515982 SULT6B1Q6IMI4 303 aa9.4□□□□□ -0.9
SCARNA6-201ENST00000515982 TCP11L2Q8N4U5 519 aa9.4□□□□□ -0.9
SCARNA6-201ENST00000515982 COL3A1P02461 1466 aaPredicted RBP9.4□□□□□ -0.91
SCARNA6-201ENST00000515982 PLCH1Q4KWH8 1693 aa9.39□□□□□ -0.91
SCARNA6-201ENST00000515982 SPATA31A5Q5VU36 1347 aa9.39□□□□□ -0.91
SCARNA6-201ENST00000515982 SPATA31A7Q8IWB4 1347 aa9.39□□□□□ -0.91
SCARNA6-201ENST00000515982 RAPGEF4Q8WZA2 1011 aa9.39□□□□□ -0.91
SCARNA6-201ENST00000515982 CDCA7Q9BWT1 371 aaPredicted RBP9.39□□□□□ -0.91
SCARNA6-201ENST00000515982 ADAMTS8Q9UP79 889 aa9.39□□□□□ -0.91
SCARNA6-201ENST00000515982 FAM208AQ9UK61 1670 aaKnown RBP9.39□□□□□ -0.91
SCARNA6-201ENST00000515982 LRP5O75197 1615 aa9.38□□□□□ -0.91
SCARNA6-201ENST00000515982 SPATA31A1Q5TZJ5 1347 aa9.38□□□□□ -0.91
SCARNA6-201ENST00000515982 HMOX1P09601 288 aa9.38□□□□□ -0.91
SCARNA6-201ENST00000515982 TATP17735 454 aaPredicted RBP9.38□□□□□ -0.91
SCARNA6-201ENST00000515982 BARGINQ6ZT62 677 aa9.38□□□□□ -0.91
SCARNA6-201ENST00000515982 USP35Q9P2H5 1018 aa9.38□□□□□ -0.91
SCARNA6-201ENST00000515982 PSDA5PKW4 1024 aaPredicted RBP9.37□□□□□ -0.91
SCARNA6-201ENST00000515982 IL2RBP14784 551 aa9.37□□□□□ -0.91
SCARNA6-201ENST00000515982 AMOTQ4VCS5 1084 aa9.37□□□□□ -0.91
SCARNA6-201ENST00000515982 PLEKHO1Q53GL0 409 aaPredicted RBP9.37□□□□□ -0.91
SCARNA6-201ENST00000515982 FAM9BQ8IZU0 186 aa9.37□□□□□ -0.91
SCARNA6-201ENST00000515982 KDRP35968 1356 aa9.37□□□□□ -0.91
SCARNA6-201ENST00000515982 NRAPQ86VF7 1730 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms