RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 KRT27Q7Z3Y8 459 aa26.82■■□□□ 1.88
LMNA-225ENST00000515824 TCP11L2Q8N4U5 519 aa26.82■■□□□ 1.88
LMNA-225ENST00000515824 CARD14Q9BXL6 1004 aa26.82■■□□□ 1.88
LMNA-225ENST00000515824 USP54Q70EL1 1684 aa26.82■■□□□ 1.88
LMNA-225ENST00000515824 BARGINQ6ZT62 677 aa26.81■■□□□ 1.88
LMNA-225ENST00000515824 THRAP3Q9Y2W1 955 aaKnown RBP26.81■■□□□ 1.88
LMNA-225ENST00000515824 TOM1L2Q6ZVM7 507 aa26.8■■□□□ 1.88
LMNA-225ENST00000515824 GGNBP2Q9H3C7 697 aa26.8■■□□□ 1.88
LMNA-225ENST00000515824 CSB-PGBD3P0DP91 1061 aa26.79■■□□□ 1.88
LMNA-225ENST00000515824 C11orf95C9JLR9 678 aaPredicted RBP26.78■■□□□ 1.88
LMNA-225ENST00000515824 WDR17Q8IZU2 1322 aa26.78■■□□□ 1.88
LMNA-225ENST00000515824 CRB1P82279 1406 aa26.78■■□□□ 1.88
LMNA-225ENST00000515824 COL18A1P39060 1754 aa26.78■■□□□ 1.88
LMNA-225ENST00000515824 NSD3Q9BZ95 1437 aa26.77■■□□□ 1.88
LMNA-225ENST00000515824 MYOM1P52179 1685 aa26.76■■□□□ 1.87
LMNA-225ENST00000515824 ABCC6O95255 1503 aa26.74■■□□□ 1.87
LMNA-225ENST00000515824 CGNL1Q0VF96 1302 aa26.73■■□□□ 1.87
LMNA-225ENST00000515824 CCDC125Q86Z20 511 aa26.73■■□□□ 1.87
LMNA-225ENST00000515824 IP6K1Q92551 441 aa26.73■■□□□ 1.87
LMNA-225ENST00000515824 PANK3Q9H999 370 aa26.73■■□□□ 1.87
LMNA-225ENST00000515824 BRWD3Q6RI45 1802 aa26.72■■□□□ 1.87
LMNA-225ENST00000515824 CARD10Q9BWT7 1032 aa26.72■■□□□ 1.87
LMNA-225ENST00000515824 FBLN1P23142 703 aa26.71■■□□□ 1.87
LMNA-225ENST00000515824 AMPHP49418 695 aa26.71■■□□□ 1.87
LMNA-225ENST00000515824 MAP3K19Q56UN5 1328 aa26.7■■□□□ 1.87
LMNA-225ENST00000515824 PDE3BQ13370 1112 aa26.7■■□□□ 1.86
LMNA-225ENST00000515824 THSD7AQ9UPZ6 1657 aa26.7■■□□□ 1.86
LMNA-225ENST00000515824 ERBB3P21860 1342 aa26.69■■□□□ 1.86
LMNA-225ENST00000515824 ANKRD24Q8TF21 1146 aa26.69■■□□□ 1.86
LMNA-225ENST00000515824 KIF7Q2M1P5 1343 aa26.68■■□□□ 1.86
LMNA-225ENST00000515824 EP400Q96L91 3159 aa26.67■■□□□ 1.86
LMNA-225ENST00000515824 BLMP54132 1417 aaPredicted RBP26.67■■□□□ 1.86
LMNA-225ENST00000515824 LTN1O94822 1766 aa26.67■■□□□ 1.86
LMNA-225ENST00000515824 RRS1Q15050 365 aaKnown RBP26.67■■□□□ 1.86
LMNA-225ENST00000515824 CDCA7Q9BWT1 371 aaPredicted RBP26.67■■□□□ 1.86
LMNA-225ENST00000515824 RGPD5Q99666 1765 aa26.66■■□□□ 1.86
LMNA-225ENST00000515824 HOXC9P31274 260 aa26.66■■□□□ 1.86
LMNA-225ENST00000515824 NLRP2Q9NX02 1062 aa26.66■■□□□ 1.86
LMNA-225ENST00000515824 FAM182BQ5T319 152 aa26.65■■□□□ 1.86
LMNA-225ENST00000515824 CCDC7Q96M83 1385 aa26.65■■□□□ 1.86
LMNA-225ENST00000515824 SF3B2Q13435 895 aaKnown RBP26.64■■□□□ 1.86
LMNA-225ENST00000515824 KIF20BQ96Q89 1820 aa26.64■■□□□ 1.85
LMNA-225ENST00000515824 FAM196AQ6ZSG2 479 aa26.63■■□□□ 1.85
LMNA-225ENST00000515824 LTV1Q96GA3 475 aaPredicted RBP26.63■■□□□ 1.85
LMNA-225ENST00000515824 DDB1Q16531 1140 aa26.62■■□□□ 1.85
LMNA-225ENST00000515824 KNSTRNQ9Y448 316 aa26.61■■□□□ 1.85
LMNA-225ENST00000515824 RTL1A6NKG5 1358 aa26.6■■□□□ 1.85
LMNA-225ENST00000515824 KIF24Q5T7B8 1368 aa26.58■■□□□ 1.84
LMNA-225ENST00000515824 EXOC5O00471 708 aa26.57■■□□□ 1.84
LMNA-225ENST00000515824 NSD2O96028 1365 aa26.56■■□□□ 1.84
LMNA-225ENST00000515824 PARP4Q9UKK3 1724 aaKnown RBP26.56■■□□□ 1.84
LMNA-225ENST00000515824 PPM1GO15355 546 aaPredicted RBP26.55■■□□□ 1.84
LMNA-225ENST00000515824 IL2RBP14784 551 aa26.55■■□□□ 1.84
LMNA-225ENST00000515824 HSP90AB2PQ58FF8 381 aa26.55■■□□□ 1.84
LMNA-225ENST00000515824 EMILIN1Q9Y6C2 1016 aa26.55■■□□□ 1.84
LMNA-225ENST00000515824 FLT4P35916 1363 aa26.55■■□□□ 1.84
LMNA-225ENST00000515824 DISP2A7MBM2 1401 aa26.55■■□□□ 1.84
LMNA-225ENST00000515824 WASHC2AQ641Q2 1341 aa26.54■■□□□ 1.84
LMNA-225ENST00000515824 TNNT2P45379 298 aaPredicted RBP26.53■■□□□ 1.84
LMNA-225ENST00000515824 INSRP06213 1382 aa26.53■■□□□ 1.84
LMNA-225ENST00000515824 SMG6Q86US8 1419 aaKnown RBP26.52■■□□□ 1.84
LMNA-225ENST00000515824 TRIM37O94972 964 aa26.51■■□□□ 1.83
LMNA-225ENST00000515824 BAG6P46379 1132 aa26.51■■□□□ 1.83
LMNA-225ENST00000515824 DEFB132Q7Z7B7 95 aa26.51■■□□□ 1.83
LMNA-225ENST00000515824 MORC1Q86VD1 984 aa26.51■■□□□ 1.83
LMNA-225ENST00000515824 POLKQ9UBT6 870 aa26.5■■□□□ 1.83
LMNA-225ENST00000515824 OVOS2A0A0G2JMS6 1433 aa26.48■■□□□ 1.83
LMNA-225ENST00000515824 NBPF6Q5VWK0 638 aa26.48■■□□□ 1.83
LMNA-225ENST00000515824 MARCH10Q8NA82 808 aaPredicted RBP26.48■■□□□ 1.83
LMNA-225ENST00000515824 NBPF4Q96M43 638 aa26.48■■□□□ 1.83
LMNA-225ENST00000515824 LRRC37A3O60309 1634 aa26.47■■□□□ 1.83
LMNA-225ENST00000515824 PER1O15534 1290 aaPredicted RBP26.47■■□□□ 1.83
LMNA-225ENST00000515824 AMER1Q5JTC6 1135 aaPredicted RBP26.47■■□□□ 1.83
LMNA-225ENST00000515824 FAM208AQ9UK61 1670 aaKnown RBP26.47■■□□□ 1.83
LMNA-225ENST00000515824 WNK3Q9BYP7 1800 aa26.46■■□□□ 1.83
LMNA-225ENST00000515824 ANKRD26Q9UPS8 1709 aa26.45■■□□□ 1.82
LMNA-225ENST00000515824 APBA3O96018 575 aa26.44■■□□□ 1.82
LMNA-225ENST00000515824 TNS2Q63HR2 1409 aa26.44■■□□□ 1.82
LMNA-225ENST00000515824 PEAK1Q9H792 1746 aa26.44■■□□□ 1.82
LMNA-225ENST00000515824 EN1Q05925 392 aaPredicted RBP26.43■■□□□ 1.82
LMNA-225ENST00000515824 RGPD1P0DJD0 1748 aa26.42■■□□□ 1.82
LMNA-225ENST00000515824 MAP2P11137 1827 aaKnown RBP26.42■■□□□ 1.82
LMNA-225ENST00000515824 USHBP1Q8N6Y0 703 aa26.41■■□□□ 1.82
LMNA-225ENST00000515824 RAPGEF4Q8WZA2 1011 aa26.41■■□□□ 1.82
LMNA-225ENST00000515824 BCL9O00512 1426 aa26.4■■□□□ 1.82
LMNA-225ENST00000515824 CC2D1BQ5T0F9 858 aaKnown RBP26.39■■□□□ 1.82
LMNA-225ENST00000515824 TATP17735 454 aaPredicted RBP26.38■■□□□ 1.81
LMNA-225ENST00000515824 ZCRB1Q8TBF4 217 aaKnown RBP26.38■■□□□ 1.81
LMNA-225ENST00000515824 DDX54Q8TDD1 881 aaKnown RBP26.38■■□□□ 1.81
LMNA-225ENST00000515824 BCL11BQ9C0K0 894 aaPredicted RBP26.38■■□□□ 1.81
LMNA-225ENST00000515824 RGPD2P0DJD1 1756 aa26.36■■□□□ 1.81
LMNA-225ENST00000515824 NPC1L1Q9UHC9 1359 aa26.35■■□□□ 1.81
LMNA-225ENST00000515824 EIF4A2Q14240 407 aaKnown RBP26.35■■□□□ 1.81
LMNA-225ENST00000515824 EZH2Q15910 746 aaKnown RBP26.35■■□□□ 1.81
LMNA-225ENST00000515824 EYA1Q99502 592 aa26.35■■□□□ 1.81
LMNA-225ENST00000515824 ZEB1P37275 1124 aaPredicted RBP26.34■■□□□ 1.81
LMNA-225ENST00000515824 CAMKK2Q96RR4 588 aa26.34■■□□□ 1.81
LMNA-225ENST00000515824 TNS1Q9HBL0 1735 aaKnown RBP26.33■■□□□ 1.81
LMNA-225ENST00000515824 MEGF6O75095 1541 aa26.33■■□□□ 1.81
LMNA-225ENST00000515824 CNGB1Q14028 1251 aaPredicted RBP26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms