RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 BMP2P12643 396 aa9.75□□□□□ -0.85
LINC01088-211ENST00000515597 NPAS3Q8IXF0 933 aa9.75□□□□□ -0.85
LINC01088-211ENST00000515597 CCDC116Q8IYX3 515 aa9.75□□□□□ -0.85
LINC01088-211ENST00000515597 MAN1A2O60476 641 aa9.74□□□□□ -0.85
LINC01088-211ENST00000515597 PDXDC2PQ6P474 469 aa9.74□□□□□ -0.85
LINC01088-211ENST00000515597 UPP2O95045 317 aa9.73□□□□□ -0.85
LINC01088-211ENST00000515597 EPS8L1Q8TE68 723 aa9.73□□□□□ -0.85
LINC01088-211ENST00000515597 SLC10A4Q96EP9 437 aa9.73□□□□□ -0.85
LINC01088-211ENST00000515597 EMILIN1Q9Y6C2 1016 aa9.73□□□□□ -0.85
LINC01088-211ENST00000515597 HMX1Q9NP08 348 aaPredicted RBP9.72□□□□□ -0.85
LINC01088-211ENST00000515597 USP17L8P0C7I0 530 aa9.71□□□□□ -0.86
LINC01088-211ENST00000515597 PPP1R26Q5T8A7 1209 aaPredicted RBP9.71□□□□□ -0.86
LINC01088-211ENST00000515597 ZBTB33Q86T24 672 aa9.71□□□□□ -0.86
LINC01088-211ENST00000515597 OCSTAMPQ9BR26 566 aa9.71□□□□□ -0.86
LINC01088-211ENST00000515597 CBLBQ13191 982 aa9.7□□□□□ -0.86
LINC01088-211ENST00000515597 KCTD15Q96SI1 283 aaPredicted RBP9.7□□□□□ -0.86
LINC01088-211ENST00000515597 DNMT3LQ9UJW3 386 aa9.7□□□□□ -0.86
LINC01088-211ENST00000515597 ZC3H4Q9UPT8 1303 aaKnown RBP9.7□□□□□ -0.86
LINC01088-211ENST00000515597 SOS2Q07890 1332 aaPredicted RBP9.69□□□□□ -0.86
LINC01088-211ENST00000515597 TSEN34Q9BSV6 310 aaKnown RBP9.68□□□□□ -0.86
LINC01088-211ENST00000515597 LORP23490 312 aaPredicted RBP9.67□□□□□ -0.86
LINC01088-211ENST00000515597 RFC5P40937 340 aa9.67□□□□□ -0.86
LINC01088-211ENST00000515597 PTK2Q05397 1052 aa9.67□□□□□ -0.86
LINC01088-211ENST00000515597 INTS6LQ5JSJ4 861 aaKnown RBP9.67□□□□□ -0.86
LINC01088-211ENST00000515597 ADAM32Q8TC27 787 aa9.67□□□□□ -0.86
LINC01088-211ENST00000515597 PGPEP1Q9NXJ5 209 aa9.67□□□□□ -0.86
LINC01088-211ENST00000515597 CDV3Q9UKY7 258 aaKnown RBP9.66□□□□□ -0.86
LINC01088-211ENST00000515597 VSIG8P0DPA2 414 aa9.65□□□□□ -0.86
LINC01088-211ENST00000515597 ZSCAN1Q8NBB4 408 aa9.65□□□□□ -0.86
LINC01088-211ENST00000515597 TTLL8A6PVC2 850 aa9.64□□□□□ -0.87
LINC01088-211ENST00000515597 PPFIA3O75145 1194 aa9.64□□□□□ -0.87
LINC01088-211ENST00000515597 RAB15P59190 212 aa9.64□□□□□ -0.87
LINC01088-211ENST00000515597 Q6ZVU0 165 aa9.64□□□□□ -0.87
LINC01088-211ENST00000515597 AGBL1Q96MI9 1066 aa9.64□□□□□ -0.87
LINC01088-211ENST00000515597 GPSM3Q9Y4H4 160 aa9.64□□□□□ -0.87
LINC01088-211ENST00000515597 FIGNL2A6NMB9 653 aa9.63□□□□□ -0.87
LINC01088-211ENST00000515597 DHX9Q08211 1270 aaKnown RBP9.62□□□□□ -0.87
LINC01088-211ENST00000515597 NEUROD2Q15784 382 aa9.62□□□□□ -0.87
LINC01088-211ENST00000515597 PNMA1Q8ND90 353 aa9.62□□□□□ -0.87
LINC01088-211ENST00000515597 TMPRSS4Q9NRS4 437 aa9.62□□□□□ -0.87
LINC01088-211ENST00000515597 SPINT1O43278 529 aa9.61□□□□□ -0.87
LINC01088-211ENST00000515597 RELBQ01201 579 aa9.61□□□□□ -0.87
LINC01088-211ENST00000515597 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.61□□□□□ -0.87
LINC01088-211ENST00000515597 PCMTD1Q96MG8 357 aaPredicted RBP9.61□□□□□ -0.87
LINC01088-211ENST00000515597 TRIM34Q9BYJ4 488 aa9.61□□□□□ -0.87
LINC01088-211ENST00000515597 NBPF20Q3BBV1 942 aa9.6□□□□□ -0.87
LINC01088-211ENST00000515597 IL27Q8NEV9 243 aa9.6□□□□□ -0.87
LINC01088-211ENST00000515597 PTSQ03393 145 aa9.59□□□□□ -0.87
LINC01088-211ENST00000515597 DZIP3Q86Y13 1208 aaKnown RBP9.59□□□□□ -0.87
LINC01088-211ENST00000515597 ZNF784Q8NCA9 323 aaPredicted RBP9.59□□□□□ -0.87
LINC01088-211ENST00000515597 FAM181BA6NEQ2 426 aa9.58□□□□□ -0.88
LINC01088-211ENST00000515597 CTSOP43234 321 aaPredicted RBP9.58□□□□□ -0.88
LINC01088-211ENST00000515597 INSM2Q96T92 566 aaPredicted RBP9.58□□□□□ -0.88
LINC01088-211ENST00000515597 GOPCQ9HD26 462 aa9.58□□□□□ -0.88
LINC01088-211ENST00000515597 ZNF395Q9H8N7 513 aaPredicted RBP9.57□□□□□ -0.88
LINC01088-211ENST00000515597 ERVH48-1M5A8F1 160 aa9.56□□□□□ -0.88
LINC01088-211ENST00000515597 POLMQ9NP87 494 aaPredicted RBP9.56□□□□□ -0.88
LINC01088-211ENST00000515597 TMEM259Q4ZIN3 620 aa9.55□□□□□ -0.88
LINC01088-211ENST00000515597 ESPNB1AK53 854 aa9.54□□□□□ -0.88
LINC01088-211ENST00000515597 LILRA1O75019 489 aa9.54□□□□□ -0.88
LINC01088-211ENST00000515597 CCDC155Q8N6L0 562 aa9.54□□□□□ -0.88
LINC01088-211ENST00000515597 GPR161Q8N6U8 529 aaKnown RBP9.54□□□□□ -0.88
LINC01088-211ENST00000515597 GJD4Q96KN9 370 aaPredicted RBP9.54□□□□□ -0.88
LINC01088-211ENST00000515597 ADH1AP07327 375 aa9.53□□□□□ -0.88
LINC01088-211ENST00000515597 ADD1P35611 737 aaKnown RBP9.53□□□□□ -0.88
LINC01088-211ENST00000515597 BRPF1P55201 1214 aaPredicted RBP9.53□□□□□ -0.88
LINC01088-211ENST00000515597 KRT76Q01546 638 aa9.53□□□□□ -0.88
LINC01088-211ENST00000515597 RNF217Q8TC41 542 aa9.53□□□□□ -0.88
LINC01088-211ENST00000515597 CYLDQ9NQC7 956 aa9.52□□□□□ -0.89
LINC01088-211ENST00000515597 PCDHB9Q9Y5E1 797 aa9.52□□□□□ -0.89
LINC01088-211ENST00000515597 ZBBXA8MT70 800 aa9.51□□□□□ -0.89
LINC01088-211ENST00000515597 FBXO45P0C2W1 286 aa9.51□□□□□ -0.89
LINC01088-211ENST00000515597 KDF1Q8NAX2 398 aaPredicted RBP9.51□□□□□ -0.89
LINC01088-211ENST00000515597 SLC35F4A4IF30 521 aa9.5□□□□□ -0.89
LINC01088-211ENST00000515597 FOXD4L5Q5VV16 416 aaPredicted RBP9.5□□□□□ -0.89
LINC01088-211ENST00000515597 GIGYF1O75420 1035 aaPredicted RBP9.49□□□□□ -0.89
LINC01088-211ENST00000515597 PTGIRP43119 386 aa9.49□□□□□ -0.89
LINC01088-211ENST00000515597 CNTNAP3BQ96NU0 1288 aa9.49□□□□□ -0.89
LINC01088-211ENST00000515597 CNTNAP3Q9BZ76 1288 aa9.49□□□□□ -0.89
LINC01088-211ENST00000515597 ITGA6P23229 1130 aa9.48□□□□□ -0.89
LINC01088-211ENST00000515597 COL25A1Q9BXS0 654 aaPredicted RBP9.48□□□□□ -0.89
LINC01088-211ENST00000515597 SENP3-EIF4A1A0A087X0R7 540 aa9.47□□□□□ -0.89
LINC01088-211ENST00000515597 CDC14CA4D256 554 aa9.47□□□□□ -0.89
LINC01088-211ENST00000515597 RNFT1Q5M7Z0 435 aa9.47□□□□□ -0.89
LINC01088-211ENST00000515597 SEPT12Q8IYM1 358 aa9.47□□□□□ -0.89
LINC01088-211ENST00000515597 VWA5B2Q8N398 1253 aa9.46□□□□□ -0.9
LINC01088-211ENST00000515597 NANOS1Q8WY41 292 aaKnown RBP9.46□□□□□ -0.9
LINC01088-211ENST00000515597 GPR37L1O60883 481 aa9.45□□□□□ -0.9
LINC01088-211ENST00000515597 MTMR14Q8NCE2 650 aa9.44□□□□□ -0.9
LINC01088-211ENST00000515597 ATP5J2-PTCD1G3V325 749 aa9.42□□□□□ -0.9
LINC01088-211ENST00000515597 RHOQP17081 205 aa9.42□□□□□ -0.9
LINC01088-211ENST00000515597 NR1H3Q13133 447 aa9.42□□□□□ -0.9
LINC01088-211ENST00000515597 TPRNQ4KMQ1 711 aa9.42□□□□□ -0.9
LINC01088-211ENST00000515597 SV2AQ7L0J3 742 aa9.42□□□□□ -0.9
LINC01088-211ENST00000515597 LYSMD3Q7Z3D4 306 aa9.42□□□□□ -0.9
LINC01088-211ENST00000515597 PRICKLE2Q7Z3G6 844 aa9.42□□□□□ -0.9
LINC01088-211ENST00000515597 MEN1O00255 615 aa9.41□□□□□ -0.9
LINC01088-211ENST00000515597 SNRKQ9NRH2 765 aa9.41□□□□□ -0.9
LINC01088-211ENST00000515597 CUEDC1Q9NWM3 386 aaPredicted RBP9.41□□□□□ -0.9
LINC01088-211ENST00000515597 SCTRP47872 440 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms