RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 ZNF827Q17R98 1081 aa20.33■□□□□ 0.85
SMAD1-216ENST00000515527 SIRT1Q96EB6 747 aa20.33■□□□□ 0.85
SMAD1-216ENST00000515527 ROCK1Q13464 1354 aa20.33■□□□□ 0.84
SMAD1-216ENST00000515527 MARCH10Q8NA82 808 aaPredicted RBP20.32■□□□□ 0.84
SMAD1-216ENST00000515527 PAPPAQ13219 1627 aa20.31■□□□□ 0.84
SMAD1-216ENST00000515527 COL24A1Q17RW2 1714 aa20.3■□□□□ 0.84
SMAD1-216ENST00000515527 LMO7Q8WWI1 1683 aa20.3■□□□□ 0.84
SMAD1-216ENST00000515527 CRB1P82279 1406 aa20.29■□□□□ 0.84
SMAD1-216ENST00000515527 BCL9O00512 1426 aa20.28■□□□□ 0.84
SMAD1-216ENST00000515527 PRAM1Q96QH2 718 aa20.28■□□□□ 0.84
SMAD1-216ENST00000515527 ARHGEF28Q8N1W1 1705 aaKnown RBP20.27■□□□□ 0.83
SMAD1-216ENST00000515527 COL5A2P05997 1499 aaPredicted RBP20.26■□□□□ 0.83
SMAD1-216ENST00000515527 HSPA1AP0DMV8 641 aaKnown RBP20.25■□□□□ 0.83
SMAD1-216ENST00000515527 HSPA1BP0DMV9 641 aaKnown RBP20.25■□□□□ 0.83
SMAD1-216ENST00000515527 ANKRD30BQ9BXX2 1392 aa20.24■□□□□ 0.83
SMAD1-216ENST00000515527 POGKQ9P215 609 aa20.24■□□□□ 0.83
SMAD1-216ENST00000515527 CPDO75976 1380 aa20.23■□□□□ 0.83
SMAD1-216ENST00000515527 PRR36Q9H6K5 1346 aa20.23■□□□□ 0.83
SMAD1-216ENST00000515527 QSER1Q2KHR3 1735 aa20.22■□□□□ 0.83
SMAD1-216ENST00000515527 HIRIP3Q9BW71 556 aaPredicted RBP20.22■□□□□ 0.83
SMAD1-216ENST00000515527 TULP4Q9NRJ4 1543 aa20.22■□□□□ 0.83
SMAD1-216ENST00000515527 EIF3AQ14152 1382 aaKnown RBP20.21■□□□□ 0.83
SMAD1-216ENST00000515527 TOM1L2Q6ZVM7 507 aa20.21■□□□□ 0.83
SMAD1-216ENST00000515527 PNPLA7Q6ZV29 1317 aa20.21■□□□□ 0.83
SMAD1-216ENST00000515527 WNK3Q9BYP7 1800 aa20.2■□□□□ 0.82
SMAD1-216ENST00000515527 ZBTB7CA1YPR0 619 aa20.2■□□□□ 0.82
SMAD1-216ENST00000515527 FAM161AQ3B820 660 aa20.2■□□□□ 0.82
SMAD1-216ENST00000515527 AKT1S1Q96B36 256 aa20.19■□□□□ 0.82
SMAD1-216ENST00000515527 LRRC4BQ9NT99 713 aa20.19■□□□□ 0.82
SMAD1-216ENST00000515527 TNS2Q63HR2 1409 aa20.19■□□□□ 0.82
SMAD1-216ENST00000515527 RGL3Q3MIN7 710 aa20.18■□□□□ 0.82
SMAD1-216ENST00000515527 RBM46Q8TBY0 533 aaKnown RBP20.18■□□□□ 0.82
SMAD1-216ENST00000515527 ACSBG1Q96GR2 724 aa20.18■□□□□ 0.82
SMAD1-216ENST00000515527 TFCP2L1Q9NZI6 479 aa20.18■□□□□ 0.82
SMAD1-216ENST00000515527 NHSQ6T4R5 1651 aa20.18■□□□□ 0.82
SMAD1-216ENST00000515527 KAT6BQ8WYB5 2073 aa20.17■□□□□ 0.82
SMAD1-216ENST00000515527 C16orf71Q8IYS4 520 aaPredicted RBP20.17■□□□□ 0.82
SMAD1-216ENST00000515527 CDCA7Q9BWT1 371 aaPredicted RBP20.17■□□□□ 0.82
SMAD1-216ENST00000515527 PIK3C2GO75747 1445 aa20.17■□□□□ 0.82
SMAD1-216ENST00000515527 ITGAEP38570 1179 aa20.16■□□□□ 0.82
SMAD1-216ENST00000515527 TUBGCP6Q96RT7 1819 aa20.16■□□□□ 0.82
SMAD1-216ENST00000515527 NMRK2Q9NPI5 230 aa20.15■□□□□ 0.82
SMAD1-216ENST00000515527 BRD4O60885 1362 aaPredicted RBP20.15■□□□□ 0.82
SMAD1-216ENST00000515527 EXOC5O00471 708 aa20.14■□□□□ 0.81
SMAD1-216ENST00000515527 MSH5O43196 834 aa20.14■□□□□ 0.81
SMAD1-216ENST00000515527 CD2APQ9Y5K6 639 aa20.14■□□□□ 0.81
SMAD1-216ENST00000515527 BTAF1O14981 1849 aa20.13■□□□□ 0.81
SMAD1-216ENST00000515527 MINK1Q8N4C8 1332 aaPredicted RBP20.13■□□□□ 0.81
SMAD1-216ENST00000515527 ABTB2Q8N961 1025 aa20.13■□□□□ 0.81
SMAD1-216ENST00000515527 FSTL1Q12841 308 aa20.12■□□□□ 0.81
SMAD1-216ENST00000515527 GCP02774 474 aa20.11■□□□□ 0.81
SMAD1-216ENST00000515527 MSL1Q68DK7 614 aa20.1■□□□□ 0.81
SMAD1-216ENST00000515527 ITSN1Q15811 1721 aa20.1■□□□□ 0.81
SMAD1-216ENST00000515527 USP6P35125 1406 aa20.1■□□□□ 0.81
SMAD1-216ENST00000515527 USP19O94966 1318 aa20.09■□□□□ 0.81
SMAD1-216ENST00000515527 WASLO00401 505 aaPredicted RBP20.09■□□□□ 0.81
SMAD1-216ENST00000515527 C14orf93Q9H972 538 aaKnown RBP20.08■□□□□ 0.81
SMAD1-216ENST00000515527 SLC27A3Q5K4L6 730 aa20.07■□□□□ 0.8
SMAD1-216ENST00000515527 IGSF1Q8N6C5 1336 aa20.06■□□□□ 0.8
SMAD1-216ENST00000515527 CFAP70Q5T0N1 1121 aa20.06■□□□□ 0.8
SMAD1-216ENST00000515527 NLRP13Q86W25 1043 aa20.06■□□□□ 0.8
SMAD1-216ENST00000515527 WDR17Q8IZU2 1322 aa20.05■□□□□ 0.8
SMAD1-216ENST00000515527 KCNQ4P56696 695 aa20.02■□□□□ 0.8
SMAD1-216ENST00000515527 NUDT16Q96DE0 195 aaKnown RBP20.02■□□□□ 0.8
SMAD1-216ENST00000515527 CSB-PGBD3P0DP91 1061 aa20.01■□□□□ 0.79
SMAD1-216ENST00000515527 ACEP12821 1306 aa20.01■□□□□ 0.79
SMAD1-216ENST00000515527 MLLT1Q03111 559 aaPredicted RBP20■□□□□ 0.79
SMAD1-216ENST00000515527 COL23A1Q86Y22 540 aaPredicted RBP20■□□□□ 0.79
SMAD1-216ENST00000515527 CARD10Q9BWT7 1032 aa20■□□□□ 0.79
SMAD1-216ENST00000515527 TRAK1Q9UPV9 953 aa20■□□□□ 0.79
SMAD1-216ENST00000515527 TRPM1Q7Z4N2 1603 aa20■□□□□ 0.79
SMAD1-216ENST00000515527 SPATA31E1Q6ZUB1 1445 aa19.99■□□□□ 0.79
SMAD1-216ENST00000515527 SLC4A1APQ9BWU0 796 aaKnown RBP19.98■□□□□ 0.79
SMAD1-216ENST00000515527 CICQ96RK0 1608 aaPredicted RBP19.98■□□□□ 0.79
SMAD1-216ENST00000515527 AXIN2Q9Y2T1 843 aa19.97■□□□□ 0.79
SMAD1-216ENST00000515527 PIK3C2AO00443 1686 aa19.97■□□□□ 0.79
SMAD1-216ENST00000515527 POLR3AO14802 1390 aaPredicted RBP19.96■□□□□ 0.79
SMAD1-216ENST00000515527 SMC1BQ8NDV3 1235 aa19.95■□□□□ 0.78
SMAD1-216ENST00000515527 COL18A1P39060 1754 aa19.95■□□□□ 0.78
SMAD1-216ENST00000515527 ABCC6O95255 1503 aa19.94■□□□□ 0.78
SMAD1-216ENST00000515527 KIAA1210Q9ULL0 1709 aa19.93■□□□□ 0.78
SMAD1-216ENST00000515527 RGPD5Q99666 1765 aa19.93■□□□□ 0.78
SMAD1-216ENST00000515527 PRDM10Q9NQV6 1147 aa19.93■□□□□ 0.78
SMAD1-216ENST00000515527 PPIP5K1Q6PFW1 1433 aa19.92■□□□□ 0.78
SMAD1-216ENST00000515527 FOXN1O15353 648 aa19.91■□□□□ 0.78
SMAD1-216ENST00000515527 CCDC7Q96M83 1385 aa19.91■□□□□ 0.78
SMAD1-216ENST00000515527 ABHD8Q96I13 439 aa19.9■□□□□ 0.78
SMAD1-216ENST00000515527 KDM2BQ8NHM5 1336 aa19.9■□□□□ 0.78
SMAD1-216ENST00000515527 ARHGAP27Q6ZUM4 889 aa19.89■□□□□ 0.77
SMAD1-216ENST00000515527 RRAGCQ9HB90 399 aa19.89■□□□□ 0.77
SMAD1-216ENST00000515527 NLRP6P59044 892 aa19.88■□□□□ 0.77
SMAD1-216ENST00000515527 KCPQ6ZWJ8 1503 aa19.87■□□□□ 0.77
SMAD1-216ENST00000515527 CCNL1Q9UK58 526 aaPredicted RBP19.87■□□□□ 0.77
SMAD1-216ENST00000515527 CCDC61Q9Y6R9 512 aa19.86■□□□□ 0.77
SMAD1-216ENST00000515527 CPSF1Q10570 1443 aaKnown RBP19.85■□□□□ 0.77
SMAD1-216ENST00000515527 C10orf71Q711Q0 1435 aa19.85■□□□□ 0.77
SMAD1-216ENST00000515527 LY75O60449 1722 aa19.85■□□□□ 0.77
SMAD1-216ENST00000515527 PLEKHG2Q9H7P9 1386 aa19.85■□□□□ 0.77
SMAD1-216ENST00000515527 LOC105371045A0A1W2PR82 267 aa19.85■□□□□ 0.77
SMAD1-216ENST00000515527 PLEKHG3A1L390 1219 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms