RNA–Protein interactions for RNA: ENST00000515421.1

CDV3-209, Transcript of CDV3 homolog, humanhuman

TSL 3 BASIC

Gene CDV3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-209ENST00000515421 KIF12Q96FN5 646 aa12.12□□□□□ -0.47
CDV3-209ENST00000515421 GDPD2Q9HCC8 539 aa12.12□□□□□ -0.47
CDV3-209ENST00000515421 IVNS1ABPQ9Y6Y0 642 aa12.12□□□□□ -0.47
CDV3-209ENST00000515421 NWD1Q149M9 1564 aa12.12□□□□□ -0.47
CDV3-209ENST00000515421 CLK2P49760 499 aaKnown RBP12.11□□□□□ -0.47
CDV3-209ENST00000515421 PTGER2P43116 358 aa12.11□□□□□ -0.47
CDV3-209ENST00000515421 MAP3K9P80192 1104 aa12.11□□□□□ -0.47
CDV3-209ENST00000515421 MYSM1Q5VVJ2 828 aa12.11□□□□□ -0.47
CDV3-209ENST00000515421 RGS17Q9UGC6 210 aaPredicted RBP12.11□□□□□ -0.47
CDV3-209ENST00000515421 RBM33Q96EV2 1170 aaKnown RBP12.1□□□□□ -0.47
CDV3-209ENST00000515421 C19orf44Q9H6X5 657 aa12.1□□□□□ -0.47
CDV3-209ENST00000515421 PRM3Q9NNZ6 103 aa12.1□□□□□ -0.47
CDV3-209ENST00000515421 NUP155O75694 1391 aa12.09□□□□□ -0.47
CDV3-209ENST00000515421 JCADQ9P266 1359 aa12.09□□□□□ -0.47
CDV3-209ENST00000515421 POM121CA8CG34 1229 aa12.09□□□□□ -0.47
CDV3-209ENST00000515421 PAK3O75914 559 aaPredicted RBP12.09□□□□□ -0.47
CDV3-209ENST00000515421 ATF3P18847 181 aa12.09□□□□□ -0.47
CDV3-209ENST00000515421 PPARGC1BQ86YN6 1023 aaKnown RBP12.08□□□□□ -0.48
CDV3-209ENST00000515421 PIP4P2Q8N4L2 257 aa12.08□□□□□ -0.48
CDV3-209ENST00000515421 MTMR14Q8NCE2 650 aa12.08□□□□□ -0.48
CDV3-209ENST00000515421 TMC2Q8TDI7 906 aa12.08□□□□□ -0.48
CDV3-209ENST00000515421 UNC13BO14795 1591 aa12.07□□□□□ -0.48
CDV3-209ENST00000515421 XIRP1Q702N8 1843 aaKnown RBP12.07□□□□□ -0.48
CDV3-209ENST00000515421 DIP2AQ14689 1571 aa12.07□□□□□ -0.48
CDV3-209ENST00000515421 SPATA31A6Q5VVP1 1343 aa12.07□□□□□ -0.48
CDV3-209ENST00000515421 TMEM131LA2VDJ0 1609 aa12.07□□□□□ -0.48
CDV3-209ENST00000515421 ROBO1Q9Y6N7 1651 aa12.06□□□□□ -0.48
CDV3-209ENST00000515421 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.06□□□□□ -0.48
CDV3-209ENST00000515421 ABL2P42684 1182 aa12.06□□□□□ -0.48
CDV3-209ENST00000515421 IGSF5Q9NSI5 407 aa12.06□□□□□ -0.48
CDV3-209ENST00000515421 GCC2Q8IWJ2 1684 aa12.05□□□□□ -0.48
CDV3-209ENST00000515421 FAM217BQ9NTX9 383 aaPredicted RBP12.05□□□□□ -0.48
CDV3-209ENST00000515421 ADAMTS13Q76LX8 1427 aa12.05□□□□□ -0.48
CDV3-209ENST00000515421 UNCXA6NJT0 531 aa12.04□□□□□ -0.48
CDV3-209ENST00000515421 PPP2R2DQ66LE6 453 aa12.04□□□□□ -0.48
CDV3-209ENST00000515421 POTEAQ6S8J7 498 aa12.04□□□□□ -0.48
CDV3-209ENST00000515421 PLPP6Q8IY26 295 aa12.04□□□□□ -0.48
CDV3-209ENST00000515421 DDX12PQ92771 950 aa12.04□□□□□ -0.48
CDV3-209ENST00000515421 FAM177A1Q8N128 213 aaPredicted RBP12.03□□□□□ -0.48
CDV3-209ENST00000515421 IQGAP3Q86VI3 1631 aa12.03□□□□□ -0.48
CDV3-209ENST00000515421 TRPM2O94759 1503 aa12.02□□□□□ -0.49
CDV3-209ENST00000515421 DCCP43146 1447 aa12.02□□□□□ -0.49
CDV3-209ENST00000515421 RBM47A0AV96 593 aaKnown RBP12.02□□□□□ -0.49
CDV3-209ENST00000515421 ITGAEP38570 1179 aa12.02□□□□□ -0.49
CDV3-209ENST00000515421 SRPK2P78362 688 aaKnown RBP12.02□□□□□ -0.49
CDV3-209ENST00000515421 NUTM2DQ5VT03 806 aaPredicted RBP12.02□□□□□ -0.49
CDV3-209ENST00000515421 ZNF772Q68DY9 489 aaPredicted RBP12.02□□□□□ -0.49
CDV3-209ENST00000515421 PRIM1P49642 420 aaKnown RBP12.01□□□□□ -0.49
CDV3-209ENST00000515421 DIXDC1Q155Q3 683 aa12.01□□□□□ -0.49
CDV3-209ENST00000515421 ZNF326Q5BKZ1 582 aaKnown RBP12.01□□□□□ -0.49
CDV3-209ENST00000515421 MEX3CQ5U5Q3 659 aaKnown RBP12.01□□□□□ -0.49
CDV3-209ENST00000515421 CHD2O14647 1828 aaKnown RBP12.01□□□□□ -0.49
CDV3-209ENST00000515421 RFX1P22670 979 aa12□□□□□ -0.49
CDV3-209ENST00000515421 CFAP70Q5T0N1 1121 aa12□□□□□ -0.49
CDV3-209ENST00000515421 PHOX2BQ99453 314 aa12□□□□□ -0.49
CDV3-209ENST00000515421 E9PCH4 1651 aa12□□□□□ -0.49
CDV3-209ENST00000515421 VRTNQ9H8Y1 702 aa11.99□□□□□ -0.49
CDV3-209ENST00000515421 PHLPP1O60346 1717 aa11.98□□□□□ -0.49
CDV3-209ENST00000515421 BRINP3Q76B58 766 aa11.98□□□□□ -0.49
CDV3-209ENST00000515421 TBC1D2BQ9UPU7 963 aa11.98□□□□□ -0.49
CDV3-209ENST00000515421 AHDC1Q5TGY3 1603 aaPredicted RBP11.97□□□□□ -0.49
CDV3-209ENST00000515421 LRRC59Q96AG4 307 aaKnown RBP11.97□□□□□ -0.49
CDV3-209ENST00000515421 TMEM106CQ9BVX2 250 aa11.97□□□□□ -0.49
CDV3-209ENST00000515421 COL16A1Q07092 1604 aaPredicted RBP11.97□□□□□ -0.49
CDV3-209ENST00000515421 SETBP1Q9Y6X0 1596 aa11.97□□□□□ -0.49
CDV3-209ENST00000515421 CARNS1A5YM72 827 aa11.96□□□□□ -0.49
CDV3-209ENST00000515421 TBC1D2Q9BYX2 928 aa11.96□□□□□ -0.49
CDV3-209ENST00000515421 GNEQ9Y223 722 aaKnown RBP11.96□□□□□ -0.49
CDV3-209ENST00000515421 PTPRUQ92729 1446 aa11.96□□□□□ -0.5
CDV3-209ENST00000515421 HDGFL1Q5TGJ6 251 aa11.95□□□□□ -0.5
CDV3-209ENST00000515421 CCDC125Q86Z20 511 aa11.95□□□□□ -0.5
CDV3-209ENST00000515421 CHMP4AQ9BY43 222 aa11.94□□□□□ -0.5
CDV3-209ENST00000515421 SETD5Q9C0A6 1442 aa11.94□□□□□ -0.5
CDV3-209ENST00000515421 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.94□□□□□ -0.5
CDV3-209ENST00000515421 RPGRIP1LQ68CZ1 1315 aa11.94□□□□□ -0.5
CDV3-209ENST00000515421 MYO5BQ9ULV0 1848 aa11.93□□□□□ -0.5
CDV3-209ENST00000515421 RXRBP28702 533 aa11.93□□□□□ -0.5
CDV3-209ENST00000515421 METP08581 1390 aa11.93□□□□□ -0.5
CDV3-209ENST00000515421 MST1RQ04912 1400 aa11.92□□□□□ -0.5
CDV3-209ENST00000515421 ADGRL3Q9HAR2 1447 aa11.92□□□□□ -0.5
CDV3-209ENST00000515421 RRBP1Q9P2E9 1410 aaKnown RBP11.92□□□□□ -0.5
CDV3-209ENST00000515421 ADAMTS19Q8TE59 1207 aa11.92□□□□□ -0.5
CDV3-209ENST00000515421 PPP1R12CQ9BZL4 782 aa11.92□□□□□ -0.5
CDV3-209ENST00000515421 LIMD1Q9UGP4 676 aa11.92□□□□□ -0.5
CDV3-209ENST00000515421 ASXL1Q8IXJ9 1541 aa11.91□□□□□ -0.5
CDV3-209ENST00000515421 LRP6O75581 1613 aa11.91□□□□□ -0.5
CDV3-209ENST00000515421 NUTM2BA6NNL0 878 aaPredicted RBP11.91□□□□□ -0.5
CDV3-209ENST00000515421 NUTM2EB1AL46 878 aaPredicted RBP11.91□□□□□ -0.5
CDV3-209ENST00000515421 PRKAR2AP13861 404 aaKnown RBP11.91□□□□□ -0.5
CDV3-209ENST00000515421 B4GALNT3Q6L9W6 998 aa11.91□□□□□ -0.5
CDV3-209ENST00000515421 NUTM2AQ8IVF1 878 aaPredicted RBP11.91□□□□□ -0.5
CDV3-209ENST00000515421 MICALL2Q8IY33 904 aa11.91□□□□□ -0.5
CDV3-209ENST00000515421 UPF1Q92900 1129 aaKnown RBP eCLIP11.91□□□□□ -0.52e-13■■□□□ 13.4
CDV3-209ENST00000515421 NAIPQ13075 1403 aa11.91□□□□□ -0.5
CDV3-209ENST00000515421 XRN1Q8IZH2 1706 aaKnown RBP11.91□□□□□ -0.5
CDV3-209ENST00000515421 TMEM88BA6NKF7 163 aa11.9□□□□□ -0.5
CDV3-209ENST00000515421 TUSC1Q2TAM9 212 aa11.9□□□□□ -0.5
CDV3-209ENST00000515421 TRIM52Q96A61 297 aa11.9□□□□□ -0.5
CDV3-209ENST00000515421 NPDC1Q9NQX5 325 aaPredicted RBP11.9□□□□□ -0.5
CDV3-209ENST00000515421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.9□□□□□ -0.51e-6■■■□□ 16.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms