RNA–Protein interactions for RNA: ENST00000515215.6

SNCAIP-221, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,708 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-221ENST00000515215 IP6K1Q92551 441 aa16.65■□□□□ 0.26
SNCAIP-221ENST00000515215 COL16A1Q07092 1604 aaPredicted RBP16.65■□□□□ 0.26
SNCAIP-221ENST00000515215 COL18A1P39060 1754 aa16.64■□□□□ 0.26
SNCAIP-221ENST00000515215 PHLPP1O60346 1717 aa16.64■□□□□ 0.25
SNCAIP-221ENST00000515215 SENP3-EIF4A1A0A087X0R7 540 aa16.64■□□□□ 0.25
SNCAIP-221ENST00000515215 CERKQ8TCT0 537 aa16.64■□□□□ 0.25
SNCAIP-221ENST00000515215 RUNDC1Q96C34 613 aa16.64■□□□□ 0.25
SNCAIP-221ENST00000515215 PLEKHF1Q96S99 279 aa16.64■□□□□ 0.25
SNCAIP-221ENST00000515215 CABLES1Q8TDN4 633 aa16.63■□□□□ 0.25
SNCAIP-221ENST00000515215 COL22A1Q8NFW1 1626 aaPredicted RBP16.63■□□□□ 0.25
SNCAIP-221ENST00000515215 RGPD5Q99666 1765 aa16.62■□□□□ 0.25
SNCAIP-221ENST00000515215 ABCC6O95255 1503 aa16.62■□□□□ 0.25
SNCAIP-221ENST00000515215 UBAP1LF5GYI3 381 aa16.62■□□□□ 0.25
SNCAIP-221ENST00000515215 PLEKHG5O94827 1062 aa16.62■□□□□ 0.25
SNCAIP-221ENST00000515215 FCHSD2O94868 740 aa16.62■□□□□ 0.25
SNCAIP-221ENST00000515215 RSPH6AQ9H0K4 717 aa16.62■□□□□ 0.25
SNCAIP-221ENST00000515215 CPDO75976 1380 aa16.62■□□□□ 0.25
SNCAIP-221ENST00000515215 APAF1O14727 1248 aa16.62■□□□□ 0.25
SNCAIP-221ENST00000515215 PELP1Q8IZL8 1130 aaKnown RBP16.62■□□□□ 0.25
SNCAIP-221ENST00000515215 LRRC59Q96AG4 307 aaKnown RBP16.62■□□□□ 0.25
SNCAIP-221ENST00000515215 ZC3H6P61129 1189 aaKnown RBP16.6■□□□□ 0.25
SNCAIP-221ENST00000515215 HMOX1P09601 288 aa16.59■□□□□ 0.25
SNCAIP-221ENST00000515215 PIP4K2BP78356 416 aa16.59■□□□□ 0.25
SNCAIP-221ENST00000515215 IGSF1Q8N6C5 1336 aa16.59■□□□□ 0.25
SNCAIP-221ENST00000515215 RGPD2P0DJD1 1756 aa16.59■□□□□ 0.25
SNCAIP-221ENST00000515215 KDRP35968 1356 aa16.59■□□□□ 0.25
SNCAIP-221ENST00000515215 TCP11L2Q8N4U5 519 aa16.59■□□□□ 0.25
SNCAIP-221ENST00000515215 NGEFQ8N5V2 710 aa16.59■□□□□ 0.25
SNCAIP-221ENST00000515215 ZNF521Q96K83 1311 aa16.59■□□□□ 0.25
SNCAIP-221ENST00000515215 PNNQ9H307 717 aaKnown RBP16.59■□□□□ 0.25
SNCAIP-221ENST00000515215 KIAA0232Q92628 1395 aa16.58■□□□□ 0.24
SNCAIP-221ENST00000515215 PRKAR2BP31323 418 aa16.58■□□□□ 0.24
SNCAIP-221ENST00000515215 NCBP3Q53F19 620 aaKnown RBP16.58■□□□□ 0.24
SNCAIP-221ENST00000515215 EYA1Q99502 592 aa16.58■□□□□ 0.24
SNCAIP-221ENST00000515215 AXIN2Q9Y2T1 843 aa16.58■□□□□ 0.24
SNCAIP-221ENST00000515215 SALL2Q9Y467 1007 aaPredicted RBP16.58■□□□□ 0.24
SNCAIP-221ENST00000515215 CAMTA1Q9Y6Y1 1673 aa16.57■□□□□ 0.24
SNCAIP-221ENST00000515215 ZBTB7CA1YPR0 619 aa16.57■□□□□ 0.24
SNCAIP-221ENST00000515215 AEBP1Q8IUX7 1158 aa16.57■□□□□ 0.24
SNCAIP-221ENST00000515215 LMO7Q8WWI1 1683 aa16.57■□□□□ 0.24
SNCAIP-221ENST00000515215 SULT6B1Q6IMI4 303 aa16.56■□□□□ 0.24
SNCAIP-221ENST00000515215 PHF23Q9BUL5 403 aaPredicted RBP16.56■□□□□ 0.24
SNCAIP-221ENST00000515215 NCAPD2Q15021 1401 aa16.55■□□□□ 0.24
SNCAIP-221ENST00000515215 MAPK8IP3Q9UPT6 1336 aa16.55■□□□□ 0.24
SNCAIP-221ENST00000515215 LTV1Q96GA3 475 aaPredicted RBP16.55■□□□□ 0.24
SNCAIP-221ENST00000515215 ERBB3P21860 1342 aa16.54■□□□□ 0.24
SNCAIP-221ENST00000515215 PHACTR3Q96KR7 559 aa16.54■□□□□ 0.24
SNCAIP-221ENST00000515215 FAM208AQ9UK61 1670 aaKnown RBP16.54■□□□□ 0.24
SNCAIP-221ENST00000515215 TMPOP42166 694 aaKnown RBP16.53■□□□□ 0.24
SNCAIP-221ENST00000515215 PDE3BQ13370 1112 aa16.53■□□□□ 0.24
SNCAIP-221ENST00000515215 CCDC27Q2M243 656 aa16.53■□□□□ 0.24
SNCAIP-221ENST00000515215 ANKRD24Q8TF21 1146 aa16.53■□□□□ 0.24
SNCAIP-221ENST00000515215 DLG5Q8TDM6 1919 aa16.53■□□□□ 0.24
SNCAIP-221ENST00000515215 CHRNA2Q15822 529 aa16.53■□□□□ 0.24
SNCAIP-221ENST00000515215 RRP7AQ9Y3A4 280 aaKnown RBP16.53■□□□□ 0.24
SNCAIP-221ENST00000515215 NBPF6Q5VWK0 638 aa16.52■□□□□ 0.24
SNCAIP-221ENST00000515215 NBPF4Q96M43 638 aa16.52■□□□□ 0.24
SNCAIP-221ENST00000515215 HAP1P54257 671 aaPredicted RBP16.51■□□□□ 0.23
SNCAIP-221ENST00000515215 WWC1Q8IX03 1113 aa16.51■□□□□ 0.23
SNCAIP-221ENST00000515215 PRDM11Q9NQV5 511 aa16.51■□□□□ 0.23
SNCAIP-221ENST00000515215 NEUROD2Q15784 382 aa16.5■□□□□ 0.23
SNCAIP-221ENST00000515215 NEFMP07197 916 aa16.5■□□□□ 0.23
SNCAIP-221ENST00000515215 NFE2L2Q16236 605 aa16.5■□□□□ 0.23
SNCAIP-221ENST00000515215 CDCA7LQ96GN5 454 aa16.5■□□□□ 0.23
SNCAIP-221ENST00000515215 COL14A1Q05707 1796 aaKnown RBP16.49■□□□□ 0.23
SNCAIP-221ENST00000515215 TRIM35Q9UPQ4 493 aa16.49■□□□□ 0.23
SNCAIP-221ENST00000515215 COL5A2P05997 1499 aaPredicted RBP16.48■□□□□ 0.23
SNCAIP-221ENST00000515215 RIPK4P57078 832 aa16.48■□□□□ 0.23
SNCAIP-221ENST00000515215 USHBP1Q8N6Y0 703 aa16.48■□□□□ 0.23
SNCAIP-221ENST00000515215 FAM83GA6ND36 823 aa16.48■□□□□ 0.23
SNCAIP-221ENST00000515215 GOLGA2Q08379 1002 aa16.48■□□□□ 0.23
SNCAIP-221ENST00000515215 WDR63Q8IWG1 891 aa16.46■□□□□ 0.23
SNCAIP-221ENST00000515215 TRMT2AQ8IZ69 625 aaKnown RBP16.46■□□□□ 0.23
SNCAIP-221ENST00000515215 SLFN5Q08AF3 891 aa16.45■□□□□ 0.22
SNCAIP-221ENST00000515215 SPINK5Q9NQ38 1064 aaPredicted RBP16.45■□□□□ 0.22
SNCAIP-221ENST00000515215 JCADQ9P266 1359 aa16.45■□□□□ 0.22
SNCAIP-221ENST00000515215 WDR17Q8IZU2 1322 aa16.44■□□□□ 0.22
SNCAIP-221ENST00000515215 MTHFSDQ2M296 383 aaKnown RBP16.44■□□□□ 0.22
SNCAIP-221ENST00000515215 DUSP27Q5VZP5 1158 aa16.44■□□□□ 0.22
SNCAIP-221ENST00000515215 PLCH1Q4KWH8 1693 aa16.43■□□□□ 0.22
SNCAIP-221ENST00000515215 E9PSI1 815 aa16.43■□□□□ 0.22
SNCAIP-221ENST00000515215 CSB-PGBD3P0DP91 1061 aa16.42■□□□□ 0.22
SNCAIP-221ENST00000515215 NLRP2Q9NX02 1062 aa16.42■□□□□ 0.22
SNCAIP-221ENST00000515215 GAS2L2Q8NHY3 880 aa16.42■□□□□ 0.22
SNCAIP-221ENST00000515215 PLEKHG2Q9H7P9 1386 aa16.41■□□□□ 0.22
SNCAIP-221ENST00000515215 NRAPQ86VF7 1730 aa16.41■□□□□ 0.22
SNCAIP-221ENST00000515215 LMOD3Q0VAK6 560 aa16.41■□□□□ 0.22
SNCAIP-221ENST00000515215 IL16Q14005 1332 aa16.41■□□□□ 0.22
SNCAIP-221ENST00000515215 HSPA1LP34931 641 aa16.4■□□□□ 0.22
SNCAIP-221ENST00000515215 BTG4Q9NY30 223 aa16.4■□□□□ 0.22
SNCAIP-221ENST00000515215 NWD2Q9ULI1 1742 aa16.39■□□□□ 0.22
SNCAIP-221ENST00000515215 MEGF6O75095 1541 aa16.39■□□□□ 0.22
SNCAIP-221ENST00000515215 PKD1L3Q7Z443 1732 aa16.39■□□□□ 0.21
SNCAIP-221ENST00000515215 ADAMTS2O95450 1211 aa16.39■□□□□ 0.21
SNCAIP-221ENST00000515215 CARD10Q9BWT7 1032 aa16.39■□□□□ 0.21
SNCAIP-221ENST00000515215 LRRC37A3O60309 1634 aa16.38■□□□□ 0.21
SNCAIP-221ENST00000515215 LARP1Q6PKG0 1096 aaKnown RBP16.38■□□□□ 0.21
SNCAIP-221ENST00000515215 TOM1L2Q6ZVM7 507 aa16.38■□□□□ 0.21
SNCAIP-221ENST00000515215 THUMPD2Q9BTF0 503 aaKnown RBP16.38■□□□□ 0.21
SNCAIP-221ENST00000515215 PARP4Q9UKK3 1724 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms