RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 CRB1P82279 1406 aa34.3■■■■□ 3.08
SNF8-213ENST00000514929 FAM182BQ5T319 152 aa34.29■■■■□ 3.08
SNF8-213ENST00000514929 THRAP3Q9Y2W1 955 aaKnown RBP34.29■■■■□ 3.08
SNF8-213ENST00000514929 USP54Q70EL1 1684 aa34.28■■■■□ 3.08
SNF8-213ENST00000514929 AXIN2Q9Y2T1 843 aa34.28■■■■□ 3.08
SNF8-213ENST00000514929 CDCA8Q53HL2 280 aa34.26■■■■□ 3.08
SNF8-213ENST00000514929 TOM1L2Q6ZVM7 507 aa34.26■■■■□ 3.08
SNF8-213ENST00000514929 PDE3BQ13370 1112 aa34.23■■■■□ 3.07
SNF8-213ENST00000514929 WDR17Q8IZU2 1322 aa34.23■■■■□ 3.07
SNF8-213ENST00000514929 ANKRD36BQ8N2N9 1353 aa34.23■■■■□ 3.07
SNF8-213ENST00000514929 DEFB132Q7Z7B7 95 aa34.22■■■■□ 3.07
SNF8-213ENST00000514929 RGPD5Q99666 1765 aa34.21■■■■□ 3.07
SNF8-213ENST00000514929 CSB-PGBD3P0DP91 1061 aa34.2■■■■□ 3.07
SNF8-213ENST00000514929 OVOS2A0A0J9YW53 1432 aa34.19■■■■□ 3.06
SNF8-213ENST00000514929 OVOS2Q6IE36 1432 aa34.19■■■■□ 3.06
SNF8-213ENST00000514929 ABCC6O95255 1503 aa34.19■■■■□ 3.06
SNF8-213ENST00000514929 FAM196AQ6ZSG2 479 aa34.17■■■■□ 3.06
SNF8-213ENST00000514929 BAG6P46379 1132 aa34.16■■■■□ 3.06
SNF8-213ENST00000514929 RGPD1P0DJD0 1748 aa34.16■■■■□ 3.06
SNF8-213ENST00000514929 PARP4Q9UKK3 1724 aaKnown RBP34.16■■■■□ 3.06
SNF8-213ENST00000514929 COG3Q96JB2 828 aa34.15■■■■□ 3.06
SNF8-213ENST00000514929 LTN1O94822 1766 aa34.15■■■■□ 3.06
SNF8-213ENST00000514929 CARD10Q9BWT7 1032 aa34.12■■■■□ 3.05
SNF8-213ENST00000514929 TRIM37O94972 964 aa34.09■■■■□ 3.05
SNF8-213ENST00000514929 EIF4G2P78344 907 aaKnown RBP eCLIP34.08■■■■□ 3.05
SNF8-213ENST00000514929 DDB1Q16531 1140 aa34.08■■■■□ 3.05
SNF8-213ENST00000514929 CDCA7Q9BWT1 371 aaPredicted RBP34.08■■■■□ 3.05
SNF8-213ENST00000514929 WNK3Q9BYP7 1800 aa34.07■■■■□ 3.04
SNF8-213ENST00000514929 ERBB3P21860 1342 aa34.06■■■■□ 3.04
SNF8-213ENST00000514929 LRRC37A3O60309 1634 aa34.06■■■■□ 3.04
SNF8-213ENST00000514929 TNS1Q9HBL0 1735 aaKnown RBP34.06■■■■□ 3.04
SNF8-213ENST00000514929 CCDC7Q96M83 1385 aa34.06■■■■□ 3.04
SNF8-213ENST00000514929 MYOM1P52179 1685 aa34.06■■■■□ 3.04
SNF8-213ENST00000514929 EN1Q05925 392 aaPredicted RBP34.04■■■■□ 3.04
SNF8-213ENST00000514929 FYB1O15117 783 aa34.03■■■■□ 3.04
SNF8-213ENST00000514929 ANKRD24Q8TF21 1146 aa34.03■■■■□ 3.04
SNF8-213ENST00000514929 GGNBP2Q9H3C7 697 aa34.03■■■■□ 3.04
SNF8-213ENST00000514929 NLRP2Q9NX02 1062 aa34.03■■■■□ 3.04
SNF8-213ENST00000514929 HSPA5P11021 654 aaKnown RBP34.02■■■■□ 3.04
SNF8-213ENST00000514929 POLR3GLQ9BT43 218 aa34.02■■■■□ 3.04
SNF8-213ENST00000514929 C11orf95C9JLR9 678 aaPredicted RBP34.01■■■■□ 3.03
SNF8-213ENST00000514929 IP6K1Q92551 441 aa34.01■■■■□ 3.03
SNF8-213ENST00000514929 OVOS2A0A0G2JMS6 1433 aa34.01■■■■□ 3.03
SNF8-213ENST00000514929 DISP2A7MBM2 1401 aa34■■■■□ 3.03
SNF8-213ENST00000514929 MAP3K19Q56UN5 1328 aa33.99■■■■□ 3.03
SNF8-213ENST00000514929 APBA3O96018 575 aa33.98■■■■□ 3.03
SNF8-213ENST00000514929 FBLN1P23142 703 aa33.98■■■■□ 3.03
SNF8-213ENST00000514929 KIF20BQ96Q89 1820 aa33.97■■■■□ 3.03
SNF8-213ENST00000514929 AMPHP49418 695 aa33.97■■■■□ 3.03
SNF8-213ENST00000514929 CARD14Q9BXL6 1004 aa33.97■■■■□ 3.03
SNF8-213ENST00000514929 NSD3Q9BZ95 1437 aa33.96■■■■□ 3.03
SNF8-213ENST00000514929 EXOC5O00471 708 aa33.95■■■■□ 3.03
SNF8-213ENST00000514929 LTV1Q96GA3 475 aaPredicted RBP33.95■■■■□ 3.03
SNF8-213ENST00000514929 PEAK1Q9H792 1746 aa33.94■■■■□ 3.02
SNF8-213ENST00000514929 HOXC9P31274 260 aa33.93■■■■□ 3.02
SNF8-213ENST00000514929 EZH2Q15910 746 aaKnown RBP33.93■■■■□ 3.02
SNF8-213ENST00000514929 MARCH10Q8NA82 808 aaPredicted RBP33.92■■■■□ 3.02
SNF8-213ENST00000514929 RRS1Q15050 365 aaKnown RBP33.91■■■■□ 3.02
SNF8-213ENST00000514929 IL2RBP14784 551 aa33.9■■■■□ 3.02
SNF8-213ENST00000514929 CAMKK2Q96RR4 588 aa33.9■■■■□ 3.02
SNF8-213ENST00000514929 FAM208AQ9UK61 1670 aaKnown RBP33.9■■■■□ 3.02
SNF8-213ENST00000514929 TNS2Q63HR2 1409 aa33.89■■■■□ 3.02
SNF8-213ENST00000514929 RTL1A6NKG5 1358 aa33.89■■■■□ 3.02
SNF8-213ENST00000514929 PARD3Q8TEW0 1356 aa33.88■■■■□ 3.01
SNF8-213ENST00000514929 SBF2Q86WG5 1849 aa33.85■■■■□ 3.01
SNF8-213ENST00000514929 CGNL1Q0VF96 1302 aa33.84■■■■□ 3.01
SNF8-213ENST00000514929 BCL9O00512 1426 aa33.83■■■■□ 3.01
SNF8-213ENST00000514929 PSDA5PKW4 1024 aaPredicted RBP33.82■■■■□ 3
SNF8-213ENST00000514929 BCL11BQ9C0K0 894 aaPredicted RBP33.81■■■■□ 3
SNF8-213ENST00000514929 SMG6Q86US8 1419 aaKnown RBP33.79■■■■□ 3
SNF8-213ENST00000514929 RREB1Q92766 1687 aa33.77■■■■□ 3
SNF8-213ENST00000514929 FLT4P35916 1363 aa33.77■■■■□ 3
SNF8-213ENST00000514929 KIF24Q5T7B8 1368 aa33.77■■■■□ 3
SNF8-213ENST00000514929 RGPD2P0DJD1 1756 aa33.76■■■■□ 3
SNF8-213ENST00000514929 R3HDM1Q15032 1099 aaKnown RBP33.76■■■□□ 2.99
SNF8-213ENST00000514929 PTF1AQ7RTS3 328 aa33.76■■■□□ 2.99
SNF8-213ENST00000514929 PANK3Q9H999 370 aa33.76■■■□□ 2.99
SNF8-213ENST00000514929 INSRP06213 1382 aa33.75■■■□□ 2.99
SNF8-213ENST00000514929 HSP90AB2PQ58FF8 381 aa33.75■■■□□ 2.99
SNF8-213ENST00000514929 SRCAPQ6ZRS2 3230 aa33.73■■■□□ 2.99
SNF8-213ENST00000514929 PLSCR1O15162 318 aa33.73■■■□□ 2.99
SNF8-213ENST00000514929 EMILIN1Q9Y6C2 1016 aa33.73■■■□□ 2.99
SNF8-213ENST00000514929 NUP188Q5SRE5 1749 aa33.73■■■□□ 2.99
SNF8-213ENST00000514929 NBPF6Q5VWK0 638 aa33.72■■■□□ 2.99
SNF8-213ENST00000514929 NBPF4Q96M43 638 aa33.72■■■□□ 2.99
SNF8-213ENST00000514929 PPM1GO15355 546 aaPredicted RBP33.71■■■□□ 2.99
SNF8-213ENST00000514929 RGPD3A6NKT7 1758 aaPredicted RBP33.7■■■□□ 2.99
SNF8-213ENST00000514929 RGPD4Q7Z3J3 1758 aa33.7■■■□□ 2.99
SNF8-213ENST00000514929 NBPF14Q5TI25 921 aa33.7■■■□□ 2.99
SNF8-213ENST00000514929 DDX54Q8TDD1 881 aaKnown RBP33.7■■■□□ 2.99
SNF8-213ENST00000514929 ACSBG1Q96GR2 724 aa33.69■■■□□ 2.98
SNF8-213ENST00000514929 KCNQ2O43526 872 aa33.68■■■□□ 2.98
SNF8-213ENST00000514929 USHBP1Q8N6Y0 703 aa33.68■■■□□ 2.98
SNF8-213ENST00000514929 NHSQ6T4R5 1651 aa33.68■■■□□ 2.98
SNF8-213ENST00000514929 ANKRD26Q9UPS8 1709 aa33.67■■■□□ 2.98
SNF8-213ENST00000514929 MEGF6O75095 1541 aa33.66■■■□□ 2.98
SNF8-213ENST00000514929 TNNT2P45379 298 aaPredicted RBP33.65■■■□□ 2.98
SNF8-213ENST00000514929 RAPGEF4Q8WZA2 1011 aa33.65■■■□□ 2.98
SNF8-213ENST00000514929 ZCRB1Q8TBF4 217 aaKnown RBP33.64■■■□□ 2.98
SNF8-213ENST00000514929 MAP2P11137 1827 aaKnown RBP33.64■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms