RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 PPP4CP60510 307 aa12.74□□□□□ -0.37
LDHBP3-201ENST00000514909 NBPF14Q5TI25 921 aa12.74□□□□□ -0.37
LDHBP3-201ENST00000514909 CDCA7Q9BWT1 371 aaPredicted RBP12.74□□□□□ -0.37
LDHBP3-201ENST00000514909 EVA1BQ9NVM1 165 aa12.74□□□□□ -0.37
LDHBP3-201ENST00000514909 PCDHB3Q9Y5E6 796 aa12.74□□□□□ -0.37
LDHBP3-201ENST00000514909 SOWAHBA6NEL2 793 aa12.73□□□□□ -0.37
LDHBP3-201ENST00000514909 DXOO77932 396 aaKnown RBP12.73□□□□□ -0.37
LDHBP3-201ENST00000514909 CTHP32929 405 aa12.73□□□□□ -0.37
LDHBP3-201ENST00000514909 APLP1P51693 650 aa12.73□□□□□ -0.37
LDHBP3-201ENST00000514909 FAM69CQ0P6D2 419 aa12.73□□□□□ -0.37
LDHBP3-201ENST00000514909 NCOA4Q13772 614 aa12.73□□□□□ -0.37
LDHBP3-201ENST00000514909 MAP7D1Q3KQU3 841 aa12.73□□□□□ -0.37
LDHBP3-201ENST00000514909 RNF135Q8IUD6 432 aa12.73□□□□□ -0.37
LDHBP3-201ENST00000514909 ERCC3P19447 782 aa12.72□□□□□ -0.37
LDHBP3-201ENST00000514909 DEPDC4Q8N2C3 294 aa12.72□□□□□ -0.37
LDHBP3-201ENST00000514909 PLPP7Q8NBV4 271 aa12.72□□□□□ -0.37
LDHBP3-201ENST00000514909 FAM200AQ8TCP9 573 aa12.72□□□□□ -0.37
LDHBP3-201ENST00000514909 RASA1P20936 1047 aa12.71□□□□□ -0.37
LDHBP3-201ENST00000514909 BCAMP50895 628 aa12.71□□□□□ -0.37
LDHBP3-201ENST00000514909 KCNH2Q12809 1159 aa12.71□□□□□ -0.37
LDHBP3-201ENST00000514909 OCSTAMPQ9BR26 566 aa12.71□□□□□ -0.37
LDHBP3-201ENST00000514909 TSR3Q9UJK0 312 aaKnown RBP12.71□□□□□ -0.37
LDHBP3-201ENST00000514909 MMP16P51512 607 aa12.7□□□□□ -0.38
LDHBP3-201ENST00000514909 SWI5Q1ZZU3 235 aa12.7□□□□□ -0.38
LDHBP3-201ENST00000514909 ANKMY2Q8IV38 441 aa12.7□□□□□ -0.38
LDHBP3-201ENST00000514909 HPS5Q9UPZ3 1129 aa12.7□□□□□ -0.38
LDHBP3-201ENST00000514909 ITGBL1O95965 494 aaPredicted RBP12.69□□□□□ -0.38
LDHBP3-201ENST00000514909 NUDT12Q9BQG2 462 aa12.69□□□□□ -0.38
LDHBP3-201ENST00000514909 SLAIN2Q9P270 581 aa12.69□□□□□ -0.38
LDHBP3-201ENST00000514909 PCDHB9Q9Y5E1 797 aa12.69□□□□□ -0.38
LDHBP3-201ENST00000514909 EML3Q32P44 896 aa12.68□□□□□ -0.38
LDHBP3-201ENST00000514909 TRIM50Q86XT4 487 aa12.68□□□□□ -0.38
LDHBP3-201ENST00000514909 TRAF7Q6Q0C0 670 aa12.67□□□□□ -0.38
LDHBP3-201ENST00000514909 RBM47A0AV96 593 aaKnown RBP12.66□□□□□ -0.38
LDHBP3-201ENST00000514909 C1orf216Q8TAB5 229 aa12.66□□□□□ -0.38
LDHBP3-201ENST00000514909 ATP1A2P50993 1020 aa12.65□□□□□ -0.38
LDHBP3-201ENST00000514909 FAM160A2Q8N612 972 aaPredicted RBP12.65□□□□□ -0.38
LDHBP3-201ENST00000514909 ADAM32Q8TC27 787 aa12.65□□□□□ -0.38
LDHBP3-201ENST00000514909 ATP2B4P23634 1241 aa12.64□□□□□ -0.39
LDHBP3-201ENST00000514909 OGFOD1Q8N543 542 aa12.64□□□□□ -0.39
LDHBP3-201ENST00000514909 ARHGAP9Q9BRR9 750 aa12.64□□□□□ -0.39
LDHBP3-201ENST00000514909 SOWAHDA6NJG2 315 aa12.63□□□□□ -0.39
LDHBP3-201ENST00000514909 DNAJC14Q6Y2X3 702 aaPredicted RBP12.63□□□□□ -0.39
LDHBP3-201ENST00000514909 LARGE2Q8N3Y3 721 aa12.63□□□□□ -0.39
LDHBP3-201ENST00000514909 SPSB2Q99619 263 aa12.63□□□□□ -0.39
LDHBP3-201ENST00000514909 WBP1LQ9NX94 342 aa12.63□□□□□ -0.39
LDHBP3-201ENST00000514909 DPYDQ12882 1025 aa12.62□□□□□ -0.39
LDHBP3-201ENST00000514909 SH3BP5LQ7L8J4 393 aa12.62□□□□□ -0.39
LDHBP3-201ENST00000514909 NOD1Q9Y239 953 aa12.62□□□□□ -0.39
LDHBP3-201ENST00000514909 CLDN10P78369 228 aa12.61□□□□□ -0.39
LDHBP3-201ENST00000514909 SIX5Q8N196 739 aa12.61□□□□□ -0.39
LDHBP3-201ENST00000514909 DNAAF2Q9NVR5 837 aaKnown RBP12.61□□□□□ -0.39
LDHBP3-201ENST00000514909 NYAP1Q6ZVC0 841 aa12.59□□□□□ -0.39
LDHBP3-201ENST00000514909 ZBTB33Q86T24 672 aa12.59□□□□□ -0.39
LDHBP3-201ENST00000514909 IRX2Q9BZI1 471 aaPredicted RBP12.59□□□□□ -0.39
LDHBP3-201ENST00000514909 DKK1O94907 266 aa12.58□□□□□ -0.4
LDHBP3-201ENST00000514909 UNC93B1Q9H1C4 597 aa12.57□□□□□ -0.4
LDHBP3-201ENST00000514909 PRDM9Q9NQV7 894 aa12.57□□□□□ -0.4
LDHBP3-201ENST00000514909 DOLKQ9UPQ8 538 aa12.57□□□□□ -0.4
LDHBP3-201ENST00000514909 SH3RF1Q7Z6J0 888 aa12.56□□□□□ -0.4
LDHBP3-201ENST00000514909 DZIP3Q86Y13 1208 aaKnown RBP12.56□□□□□ -0.4
LDHBP3-201ENST00000514909 ZNF594Q96JF6 807 aaPredicted RBP12.56□□□□□ -0.4
LDHBP3-201ENST00000514909 UNCXA6NJT0 531 aa12.55□□□□□ -0.4
LDHBP3-201ENST00000514909 SERPINB4P48594 390 aa12.55□□□□□ -0.4
LDHBP3-201ENST00000514909 CCDC85AQ96PX6 553 aaPredicted RBP12.55□□□□□ -0.4
LDHBP3-201ENST00000514909 EGFL7Q9UHF1 273 aa12.55□□□□□ -0.4
LDHBP3-201ENST00000514909 ZBTB7BO15156 539 aaPredicted RBP12.54□□□□□ -0.4
LDHBP3-201ENST00000514909 ADH1BP00325 375 aa12.54□□□□□ -0.4
LDHBP3-201ENST00000514909 SEC13P55735 322 aa12.53□□□□□ -0.4
LDHBP3-201ENST00000514909 RNF20Q5VTR2 975 aa12.53□□□□□ -0.4
LDHBP3-201ENST00000514909 TAS1R3Q7RTX0 852 aa12.53□□□□□ -0.4
LDHBP3-201ENST00000514909 CCDC125Q86Z20 511 aa12.53□□□□□ -0.4
LDHBP3-201ENST00000514909 GTF2IP78347 998 aa12.52□□□□□ -0.41
LDHBP3-201ENST00000514909 TSGA10IPQ3SY00 556 aa12.52□□□□□ -0.41
LDHBP3-201ENST00000514909 SIRT1Q96EB6 747 aa12.52□□□□□ -0.41
LDHBP3-201ENST00000514909 IGSF5Q9NSI5 407 aa12.52□□□□□ -0.41
LDHBP3-201ENST00000514909 CXXC1Q9P0U4 656 aaPredicted RBP12.52□□□□□ -0.41
LDHBP3-201ENST00000514909 KIAA1024Q9UPX6 916 aa12.52□□□□□ -0.41
LDHBP3-201ENST00000514909 KCNC4Q03721 635 aa12.51□□□□□ -0.41
LDHBP3-201ENST00000514909 OCLNQ16625 522 aa12.51□□□□□ -0.41
LDHBP3-201ENST00000514909 MARSP56192 900 aaKnown RBP12.5□□□□□ -0.41
LDHBP3-201ENST00000514909 NOM1Q5C9Z4 860 aaKnown RBP12.5□□□□□ -0.41
LDHBP3-201ENST00000514909 BPHLQ86WA6 291 aaPredicted RBP12.5□□□□□ -0.41
LDHBP3-201ENST00000514909 RBM19Q9Y4C8 960 aaKnown RBP12.5□□□□□ -0.41
LDHBP3-201ENST00000514909 COPS2P61201 443 aa12.49□□□□□ -0.41
LDHBP3-201ENST00000514909 PTCRAQ6ISU1 281 aaPredicted RBP12.49□□□□□ -0.41
LDHBP3-201ENST00000514909 IGSF3O75054 1194 aa12.48□□□□□ -0.41
LDHBP3-201ENST00000514909 ZPR1O75312 459 aa12.48□□□□□ -0.41
LDHBP3-201ENST00000514909 ERFEQ4G0M1 354 aa12.48□□□□□ -0.41
LDHBP3-201ENST00000514909 OXLD1Q5BKU9 147 aa12.48□□□□□ -0.41
LDHBP3-201ENST00000514909 CCDC102BQ68D86 513 aa12.48□□□□□ -0.41
LDHBP3-201ENST00000514909 GIGYF1O75420 1035 aaPredicted RBP12.47□□□□□ -0.41
LDHBP3-201ENST00000514909 SEPT12Q8IYM1 358 aa12.47□□□□□ -0.41
LDHBP3-201ENST00000514909 PCDHGA11Q9Y5H2 935 aa12.47□□□□□ -0.41
LDHBP3-201ENST00000514909 ESPNB1AK53 854 aa12.46□□□□□ -0.41
LDHBP3-201ENST00000514909 PRMT3O60678 531 aa12.46□□□□□ -0.41
LDHBP3-201ENST00000514909 NBPF20Q3BBV1 942 aa12.46□□□□□ -0.41
LDHBP3-201ENST00000514909 CARD14Q9BXL6 1004 aa12.46□□□□□ -0.41
LDHBP3-201ENST00000514909 BIN2Q9UBW5 565 aaPredicted RBP12.46□□□□□ -0.41
LDHBP3-201ENST00000514909 MAGEB6P1A0A0J9YX57 407 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms