RNA–Protein interactions for RNA: ENST00000514467.5

SNCAIP-219, Transcript of synuclein alpha interacting protein, humanhuman

TSL 3

Gene SNCAIP, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-219ENST00000514467 CAMTA1Q9Y6Y1 1673 aa18.18■□□□□ 0.5
SNCAIP-219ENST00000514467 RTL1A6NKG5 1358 aa18.17■□□□□ 0.5
SNCAIP-219ENST00000514467 PRKRIP1Q9H875 184 aaPredicted RBP18.17■□□□□ 0.5
SNCAIP-219ENST00000514467 POLKQ9UBT6 870 aa18.17■□□□□ 0.5
SNCAIP-219ENST00000514467 FAM208AQ9UK61 1670 aaKnown RBP18.17■□□□□ 0.5
SNCAIP-219ENST00000514467 SLIT2O94813 1529 aa18.17■□□□□ 0.5
SNCAIP-219ENST00000514467 CDK12Q9NYV4 1490 aaPredicted RBP18.16■□□□□ 0.5
SNCAIP-219ENST00000514467 AMPHP49418 695 aa18.16■□□□□ 0.5
SNCAIP-219ENST00000514467 DIEXFQ68CQ4 756 aaKnown RBP18.16■□□□□ 0.5
SNCAIP-219ENST00000514467 FLT4P35916 1363 aa18.16■□□□□ 0.5
SNCAIP-219ENST00000514467 PPM1GO15355 546 aaPredicted RBP18.15■□□□□ 0.5
SNCAIP-219ENST00000514467 ANP32CO43423 234 aa18.15■□□□□ 0.5
SNCAIP-219ENST00000514467 PPP2R1AP30153 589 aa18.15■□□□□ 0.5
SNCAIP-219ENST00000514467 KIF24Q5T7B8 1368 aa18.15■□□□□ 0.5
SNCAIP-219ENST00000514467 HOXC9P31274 260 aa18.14■□□□□ 0.49
SNCAIP-219ENST00000514467 BLMP54132 1417 aaPredicted RBP18.14■□□□□ 0.49
SNCAIP-219ENST00000514467 COL5A2P05997 1499 aaPredicted RBP18.14■□□□□ 0.49
SNCAIP-219ENST00000514467 MTHFSP49914 203 aa18.13■□□□□ 0.49
SNCAIP-219ENST00000514467 IP6K1Q92551 441 aa18.13■□□□□ 0.49
SNCAIP-219ENST00000514467 NGLY1Q96IV0 654 aa18.13■□□□□ 0.49
SNCAIP-219ENST00000514467 BTG4Q9NY30 223 aa18.13■□□□□ 0.49
SNCAIP-219ENST00000514467 AXIN2Q9Y2T1 843 aa18.13■□□□□ 0.49
SNCAIP-219ENST00000514467 MYBBP1AQ9BQG0 1328 aaKnown RBP18.13■□□□□ 0.49
SNCAIP-219ENST00000514467 AFF2P51816 1311 aa18.12■□□□□ 0.49
SNCAIP-219ENST00000514467 COL3A1P02461 1466 aaPredicted RBP18.11■□□□□ 0.49
SNCAIP-219ENST00000514467 BCL9LQ86UU0 1499 aa18.11■□□□□ 0.49
SNCAIP-219ENST00000514467 WNK3Q9BYP7 1800 aa18.11■□□□□ 0.49
SNCAIP-219ENST00000514467 INSRP06213 1382 aa18.1■□□□□ 0.49
SNCAIP-219ENST00000514467 HSP90AB2PQ58FF8 381 aa18.1■□□□□ 0.49
SNCAIP-219ENST00000514467 FNBP4Q8N3X1 1017 aaPredicted RBP18.1■□□□□ 0.49
SNCAIP-219ENST00000514467 RGPD1P0DJD0 1748 aa18.09■□□□□ 0.49
SNCAIP-219ENST00000514467 ERBB3P21860 1342 aa18.08■□□□□ 0.49
SNCAIP-219ENST00000514467 ANKRD24Q8TF21 1146 aa18.08■□□□□ 0.48
SNCAIP-219ENST00000514467 LTV1Q96GA3 475 aaPredicted RBP18.08■□□□□ 0.48
SNCAIP-219ENST00000514467 STRN4Q9NRL3 753 aa18.08■□□□□ 0.48
SNCAIP-219ENST00000514467 USP21Q9UK80 565 aa18.08■□□□□ 0.48
SNCAIP-219ENST00000514467 UNC5CLQ8IV45 518 aa18.07■□□□□ 0.48
SNCAIP-219ENST00000514467 EVA1CP58658 441 aa18.06■□□□□ 0.48
SNCAIP-219ENST00000514467 WDR17Q8IZU2 1322 aa18.05■□□□□ 0.48
SNCAIP-219ENST00000514467 CSB-PGBD3P0DP91 1061 aa18.04■□□□□ 0.48
SNCAIP-219ENST00000514467 EIF4A2Q14240 407 aaKnown RBP18.04■□□□□ 0.48
SNCAIP-219ENST00000514467 LARP1Q6PKG0 1096 aaKnown RBP18.04■□□□□ 0.48
SNCAIP-219ENST00000514467 CFAP53Q96M91 514 aa18.04■□□□□ 0.48
SNCAIP-219ENST00000514467 ATRNO75882 1429 aa18.04■□□□□ 0.48
SNCAIP-219ENST00000514467 CRB1P82279 1406 aa18.04■□□□□ 0.48
SNCAIP-219ENST00000514467 GLI3P10071 1580 aa18.04■□□□□ 0.48
SNCAIP-219ENST00000514467 PHF23Q9BUL5 403 aaPredicted RBP18.03■□□□□ 0.48
SNCAIP-219ENST00000514467 DIAPH1O60610 1272 aaKnown RBP18.01■□□□□ 0.47
SNCAIP-219ENST00000514467 IL13P35225 146 aa18.01■□□□□ 0.47
SNCAIP-219ENST00000514467 ZNF772Q68DY9 489 aaPredicted RBP18.01■□□□□ 0.47
SNCAIP-219ENST00000514467 TOM1L2Q6ZVM7 507 aa18.01■□□□□ 0.47
SNCAIP-219ENST00000514467 RGS17Q9UGC6 210 aaPredicted RBP18.01■□□□□ 0.47
SNCAIP-219ENST00000514467 PARP4Q9UKK3 1724 aaKnown RBP18.01■□□□□ 0.47
SNCAIP-219ENST00000514467 VPS72Q15906 364 aa18■□□□□ 0.47
SNCAIP-219ENST00000514467 NLRP2Q9NX02 1062 aa18■□□□□ 0.47
SNCAIP-219ENST00000514467 TRPC5Q9UL62 973 aaPredicted RBP18■□□□□ 0.47
SNCAIP-219ENST00000514467 CCDC9Q9Y3X0 531 aaKnown RBP18■□□□□ 0.47
SNCAIP-219ENST00000514467 CCDC184Q52MB2 194 aa17.99■□□□□ 0.47
SNCAIP-219ENST00000514467 NBPF6Q5VWK0 638 aa17.99■□□□□ 0.47
SNCAIP-219ENST00000514467 NBPF4Q96M43 638 aa17.99■□□□□ 0.47
SNCAIP-219ENST00000514467 SPATA31A1Q5TZJ5 1347 aa17.98■□□□□ 0.47
SNCAIP-219ENST00000514467 SPATA31A5Q5VU36 1347 aa17.98■□□□□ 0.47
SNCAIP-219ENST00000514467 SPATA31A7Q8IWB4 1347 aa17.98■□□□□ 0.47
SNCAIP-219ENST00000514467 NCAPD2Q15021 1401 aa17.98■□□□□ 0.47
SNCAIP-219ENST00000514467 MIER1Q8N108 512 aa17.98■□□□□ 0.47
SNCAIP-219ENST00000514467 USHBP1Q8N6Y0 703 aa17.98■□□□□ 0.47
SNCAIP-219ENST00000514467 EYA1Q99502 592 aa17.98■□□□□ 0.47
SNCAIP-219ENST00000514467 CARD10Q9BWT7 1032 aa17.98■□□□□ 0.47
SNCAIP-219ENST00000514467 QTRT2Q9H974 415 aaKnown RBP17.98■□□□□ 0.47
SNCAIP-219ENST00000514467 USP35Q9P2H5 1018 aa17.98■□□□□ 0.47
SNCAIP-219ENST00000514467 IGSF1Q8N6C5 1336 aa17.98■□□□□ 0.47
SNCAIP-219ENST00000514467 THSD7AQ9UPZ6 1657 aa17.96■□□□□ 0.47
SNCAIP-219ENST00000514467 GJD4Q96KN9 370 aaPredicted RBP17.96■□□□□ 0.47
SNCAIP-219ENST00000514467 SHANK3Q9BYB0 1731 aa17.95■□□□□ 0.46
SNCAIP-219ENST00000514467 LRRC37A3O60309 1634 aa17.95■□□□□ 0.46
SNCAIP-219ENST00000514467 U2SURPO15042 1029 aaKnown RBP17.95■□□□□ 0.46
SNCAIP-219ENST00000514467 MRS2Q9HD23 443 aa17.95■□□□□ 0.46
SNCAIP-219ENST00000514467 NUDCQ9Y266 331 aa17.95■□□□□ 0.46
SNCAIP-219ENST00000514467 BRWD3Q6RI45 1802 aa17.95■□□□□ 0.46
SNCAIP-219ENST00000514467 PKD1L3Q7Z443 1732 aa17.95■□□□□ 0.46
SNCAIP-219ENST00000514467 POTEAQ6S8J7 498 aa17.94■□□□□ 0.46
SNCAIP-219ENST00000514467 TCP11L2Q8N4U5 519 aa17.94■□□□□ 0.46
SNCAIP-219ENST00000514467 MEGF6O75095 1541 aa17.93■□□□□ 0.46
SNCAIP-219ENST00000514467 DISP2A7MBM2 1401 aa17.93■□□□□ 0.46
SNCAIP-219ENST00000514467 THRAP3Q9Y2W1 955 aaKnown RBP17.93■□□□□ 0.46
SNCAIP-219ENST00000514467 KDRP35968 1356 aa17.92■□□□□ 0.46
SNCAIP-219ENST00000514467 CCER2I3L3R5 266 aa17.92■□□□□ 0.46
SNCAIP-219ENST00000514467 HMOX1P09601 288 aa17.92■□□□□ 0.46
SNCAIP-219ENST00000514467 SULT6B1Q6IMI4 303 aa17.92■□□□□ 0.46
SNCAIP-219ENST00000514467 AEBP1Q8IUX7 1158 aa17.92■□□□□ 0.46
SNCAIP-219ENST00000514467 VIRMAQ69YN4 1812 aaKnown RBP17.91■□□□□ 0.46
SNCAIP-219ENST00000514467 U2AF1L5P0DN76 240 aaPredicted RBP17.91■□□□□ 0.46
SNCAIP-219ENST00000514467 RBM6P78332 1123 aaKnown RBP17.91■□□□□ 0.46
SNCAIP-219ENST00000514467 U2AF1Q01081 240 aaKnown RBP eCLIP17.91■□□□□ 0.46
SNCAIP-219ENST00000514467 FAM98CQ17RN3 349 aaKnown RBP17.91■□□□□ 0.46
SNCAIP-219ENST00000514467 WDR43Q15061 677 aaKnown RBP eCLIP17.9■□□□□ 0.46
SNCAIP-219ENST00000514467 BARGINQ6ZT62 677 aa17.9■□□□□ 0.46
SNCAIP-219ENST00000514467 IL2RBP14784 551 aa17.89■□□□□ 0.45
SNCAIP-219ENST00000514467 DLG5Q8TDM6 1919 aa17.89■□□□□ 0.45
SNCAIP-219ENST00000514467 OVOS2A0A0G2JMS6 1433 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms