RNA–Protein interactions for RNA: ENST00000514455.5

RACK1-233, Transcript of receptor for activated C kinase 1, human

TSL 2 BASIC

Gene RACK1, Length 791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-233	ENST00000514455	EVA1C	P58658	441 aa		13.39	□□□□□ -0.27
RACK1-233	ENST00000514455	AXIN2	Q9Y2T1	843 aa		13.39	□□□□□ -0.27
RACK1-233	ENST00000514455	EMILIN1	Q9Y6C2	1016 aa		13.39	□□□□□ -0.27
RACK1-233	ENST00000514455	ABCA3	Q99758	1704 aa		13.39	□□□□□ -0.27
RACK1-233	ENST00000514455	NFAT5	O94916	1531 aa		13.39	□□□□□ -0.27
RACK1-233	ENST00000514455	AFF2	P51816	1311 aa		13.39	□□□□□ -0.27
RACK1-233	ENST00000514455	HOXC9	P31274	260 aa		13.38	□□□□□ -0.27
RACK1-233	ENST00000514455	USP21	Q9UK80	565 aa		13.38	□□□□□ -0.27
RACK1-233	ENST00000514455	MAP2	P11137	1827 aa	Known RBP	13.38	□□□□□ -0.27
RACK1-233	ENST00000514455	ANKRD26	Q9UPS8	1709 aa		13.38	□□□□□ -0.27
RACK1-233	ENST00000514455	PPP2R1A	P30153	589 aa		13.37	□□□□□ -0.27
RACK1-233	ENST00000514455	MTHFS	P49914	203 aa		13.37	□□□□□ -0.27
RACK1-233	ENST00000514455	ZNF772	Q68DY9	489 aa	Predicted RBP	13.37	□□□□□ -0.27
RACK1-233	ENST00000514455	UNC5CL	Q8IV45	518 aa		13.37	□□□□□ -0.27
RACK1-233	ENST00000514455	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.37	□□□□□ -0.27
RACK1-233	ENST00000514455	RNF216	Q9NWF9	866 aa	Predicted RBP	13.37	□□□□□ -0.27
RACK1-233	ENST00000514455	KIF24	Q5T7B8	1368 aa		13.36	□□□□□ -0.27
RACK1-233	ENST00000514455	ANP32C	O43423	234 aa		13.36	□□□□□ -0.27
RACK1-233	ENST00000514455	HSP90AB2P	Q58FF8	381 aa		13.36	□□□□□ -0.27
RACK1-233	ENST00000514455	STRN4	Q9NRL3	753 aa		13.36	□□□□□ -0.27
RACK1-233	ENST00000514455	PARD3	Q8TEW0	1356 aa		13.35	□□□□□ -0.27
RACK1-233	ENST00000514455	SLIT2	O94813	1529 aa		13.35	□□□□□ -0.27
RACK1-233	ENST00000514455	CSB-PGBD3	P0DP91	1061 aa		13.35	□□□□□ -0.27
RACK1-233	ENST00000514455	LTV1	Q96GA3	475 aa	Predicted RBP	13.35	□□□□□ -0.27
RACK1-233	ENST00000514455	QTRT2	Q9H974	415 aa	Known RBP	13.35	□□□□□ -0.27
RACK1-233	ENST00000514455	COL14A1	Q05707	1796 aa	Known RBP	13.35	□□□□□ -0.27
RACK1-233	ENST00000514455	FLT4	P35916	1363 aa		13.34	□□□□□ -0.27
RACK1-233	ENST00000514455	ANKRD24	Q8TF21	1146 aa		13.34	□□□□□ -0.27
RACK1-233	ENST00000514455	BCL9L	Q86UU0	1499 aa		13.34	□□□□□ -0.27
RACK1-233	ENST00000514455	CAMTA1	Q9Y6Y1	1673 aa		13.34	□□□□□ -0.27
RACK1-233	ENST00000514455	RTL1	A6NKG5	1358 aa		13.33	□□□□□ -0.27
RACK1-233	ENST00000514455	LTN1	O94822	1766 aa		13.33	□□□□□ -0.28
RACK1-233	ENST00000514455	DIEXF	Q68CQ4	756 aa	Known RBP	13.33	□□□□□ -0.28
RACK1-233	ENST00000514455	LARP1	Q6PKG0	1096 aa	Known RBP	13.33	□□□□□ -0.28
RACK1-233	ENST00000514455	RGS17	Q9UGC6	210 aa	Predicted RBP	13.33	□□□□□ -0.28
RACK1-233	ENST00000514455	TRPC5	Q9UL62	973 aa	Predicted RBP	13.33	□□□□□ -0.28
RACK1-233	ENST00000514455	CCDC9	Q9Y3X0	531 aa	Known RBP	13.33	□□□□□ -0.28
RACK1-233	ENST00000514455	INSR	P06213	1382 aa		13.32	□□□□□ -0.28
RACK1-233	ENST00000514455	COL18A1	P39060	1754 aa		13.32	□□□□□ -0.28
RACK1-233	ENST00000514455	BLM	P54132	1417 aa	Predicted RBP	13.32	□□□□□ -0.28
RACK1-233	ENST00000514455	VPS72	Q15906	364 aa		13.32	□□□□□ -0.28
RACK1-233	ENST00000514455	TOM1L2	Q6ZVM7	507 aa		13.32	□□□□□ -0.28
RACK1-233	ENST00000514455	CFAP53	Q96M91	514 aa		13.32	□□□□□ -0.28
RACK1-233	ENST00000514455	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.32	□□□□□ -0.28
RACK1-233	ENST00000514455	NLRP2	Q9NX02	1062 aa		13.31	□□□□□ -0.28
RACK1-233	ENST00000514455	ERBB3	P21860	1342 aa		13.31	□□□□□ -0.28
RACK1-233	ENST00000514455	WDR17	Q8IZU2	1322 aa		13.31	□□□□□ -0.28
RACK1-233	ENST00000514455	ABCC6	O95255	1503 aa		13.3	□□□□□ -0.28
RACK1-233	ENST00000514455	EIF4A2	Q14240	407 aa	Known RBP	13.3	□□□□□ -0.28
RACK1-233	ENST00000514455	GJD4	Q96KN9	370 aa	Predicted RBP	13.3	□□□□□ -0.28
RACK1-233	ENST00000514455	LMO7	Q8WWI1	1683 aa		13.3	□□□□□ -0.28
RACK1-233	ENST00000514455	NWD2	Q9ULI1	1742 aa		13.3	□□□□□ -0.28
RACK1-233	ENST00000514455	RGPD5	Q99666	1765 aa		13.3	□□□□□ -0.28
RACK1-233	ENST00000514455	SMG6	Q86US8	1419 aa	Known RBP	13.3	□□□□□ -0.28
RACK1-233	ENST00000514455	COL5A2	P05997	1499 aa	Predicted RBP	13.29	□□□□□ -0.28
RACK1-233	ENST00000514455	PLCH1	Q4KWH8	1693 aa		13.29	□□□□□ -0.28
RACK1-233	ENST00000514455	DIAPH1	O60610	1272 aa	Known RBP	13.29	□□□□□ -0.28
RACK1-233	ENST00000514455	POTEA	Q6S8J7	498 aa		13.29	□□□□□ -0.28
RACK1-233	ENST00000514455	CARD10	Q9BWT7	1032 aa		13.29	□□□□□ -0.28
RACK1-233	ENST00000514455	USP35	Q9P2H5	1018 aa		13.29	□□□□□ -0.28
RACK1-233	ENST00000514455	SPATA31A5	Q5VU36	1347 aa		13.29	□□□□□ -0.28
RACK1-233	ENST00000514455	SPATA31A7	Q8IWB4	1347 aa		13.29	□□□□□ -0.28
RACK1-233	ENST00000514455	PEAK1	Q9H792	1746 aa		13.28	□□□□□ -0.28
RACK1-233	ENST00000514455	RXRB	P28702	533 aa		13.28	□□□□□ -0.28
RACK1-233	ENST00000514455	IL13	P35225	146 aa		13.28	□□□□□ -0.28
RACK1-233	ENST00000514455	RBM6	P78332	1123 aa	Known RBP	13.28	□□□□□ -0.28
RACK1-233	ENST00000514455	NBPF6	Q5VWK0	638 aa		13.28	□□□□□ -0.28
RACK1-233	ENST00000514455	TCP11L2	Q8N4U5	519 aa		13.28	□□□□□ -0.28
RACK1-233	ENST00000514455	NBPF4	Q96M43	638 aa		13.28	□□□□□ -0.28
RACK1-233	ENST00000514455	SPATA31A1	Q5TZJ5	1347 aa		13.28	□□□□□ -0.28
RACK1-233	ENST00000514455	ATRN	O75882	1429 aa		13.28	□□□□□ -0.28
RACK1-233	ENST00000514455	EYA1	Q99502	592 aa		13.27	□□□□□ -0.29
RACK1-233	ENST00000514455	NUDC	Q9Y266	331 aa		13.27	□□□□□ -0.29
RACK1-233	ENST00000514455	THRAP3	Q9Y2W1	955 aa	Known RBP	13.27	□□□□□ -0.29
RACK1-233	ENST00000514455	CRB1	P82279	1406 aa		13.27	□□□□□ -0.29
RACK1-233	ENST00000514455	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.27	□□□□□ -0.29
RACK1-233	ENST00000514455	C1QBP	Q07021	282 aa	Known RBP	13.26	□□□□□ -0.29
RACK1-233	ENST00000514455	NRAP	Q86VF7	1730 aa		13.25	□□□□□ -0.29
RACK1-233	ENST00000514455	BARGIN	Q6ZT62	677 aa		13.25	□□□□□ -0.29
RACK1-233	ENST00000514455	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.25	□□□□□ -0.29
RACK1-233	ENST00000514455	U2SURP	O15042	1029 aa	Known RBP	13.24	□□□□□ -0.29
RACK1-233	ENST00000514455	ONECUT3	O60422	494 aa	Predicted RBP	13.24	□□□□□ -0.29
RACK1-233	ENST00000514455	FAM98C	Q17RN3	349 aa	Known RBP	13.24	□□□□□ -0.29
RACK1-233	ENST00000514455	USHBP1	Q8N6Y0	703 aa		13.24	□□□□□ -0.29
RACK1-233	ENST00000514455	IGSF1	Q8N6C5	1336 aa		13.22	□□□□□ -0.29
RACK1-233	ENST00000514455	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.22	□□□□□ -0.29
RACK1-233	ENST00000514455	IL2RB	P14784	551 aa		13.22	□□□□□ -0.29
RACK1-233	ENST00000514455	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
RACK1-233	ENST00000514455	SULT6B1	Q6IMI4	303 aa		13.22	□□□□□ -0.29
RACK1-233	ENST00000514455	RAPGEF4	Q8WZA2	1011 aa		13.22	□□□□□ -0.29
RACK1-233	ENST00000514455	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.22	□□□□□ -0.29
RACK1-233	ENST00000514455		A0A0G2JS52	829 aa		13.21	□□□□□ -0.29
RACK1-233	ENST00000514455	MYT1	Q01538	1121 aa		13.21	□□□□□ -0.29
RACK1-233	ENST00000514455	CCDC184	Q52MB2	194 aa		13.21	□□□□□ -0.29
RACK1-233	ENST00000514455	SEPT12	Q8IYM1	358 aa		13.21	□□□□□ -0.29
RACK1-233	ENST00000514455	COL3A1	P02461	1466 aa	Predicted RBP	13.21	□□□□□ -0.3
RACK1-233	ENST00000514455	EXOC5	O00471	708 aa		13.2	□□□□□ -0.3
RACK1-233	ENST00000514455	HMOX1	P09601	288 aa		13.2	□□□□□ -0.3
RACK1-233	ENST00000514455	TAT	P17735	454 aa	Predicted RBP	13.2	□□□□□ -0.3
RACK1-233	ENST00000514455	MIER1	Q8N108	512 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 367.9 ms