RNA–Protein interactions for RNA: ENST00000514422.1

LINC00955-202, long intergenic non-protein coding RNA 955, humanhuman

TSL 4 BASIC

Gene LINC00955, Length 1,502 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00955-202ENST00000514422 GJD4Q96KN9 370 aaPredicted RBP11.69□□□□□ -0.54
LINC00955-202ENST00000514422 PANK3Q9H999 370 aa11.69□□□□□ -0.54
LINC00955-202ENST00000514422 VPS72Q15906 364 aa11.68□□□□□ -0.54
LINC00955-202ENST00000514422 PEAK1Q9H792 1746 aa11.68□□□□□ -0.54
LINC00955-202ENST00000514422 ANKRD26Q9UPS8 1709 aa11.68□□□□□ -0.54
LINC00955-202ENST00000514422 CDK12Q9NYV4 1490 aaPredicted RBP11.68□□□□□ -0.54
LINC00955-202ENST00000514422 AATKQ6ZMQ8 1374 aa11.68□□□□□ -0.54
LINC00955-202ENST00000514422 STRN4Q9NRL3 753 aa11.67□□□□□ -0.54
LINC00955-202ENST00000514422 LARP1Q6PKG0 1096 aaKnown RBP11.66□□□□□ -0.54
LINC00955-202ENST00000514422 PPP4R3CPQ6ZMV5 832 aa11.66□□□□□ -0.54
LINC00955-202ENST00000514422 KCNH5Q8NCM2 988 aa11.66□□□□□ -0.54
LINC00955-202ENST00000514422 THSD7AQ9UPZ6 1657 aa11.66□□□□□ -0.54
LINC00955-202ENST00000514422 SPATA31A5Q5VU36 1347 aa11.66□□□□□ -0.54
LINC00955-202ENST00000514422 SPATA31A7Q8IWB4 1347 aa11.66□□□□□ -0.54
LINC00955-202ENST00000514422 COG3Q96JB2 828 aa11.65□□□□□ -0.54
LINC00955-202ENST00000514422 CCDC9Q9Y3X0 531 aaKnown RBP11.65□□□□□ -0.55
LINC00955-202ENST00000514422 RGPD2P0DJD1 1756 aa11.64□□□□□ -0.55
LINC00955-202ENST00000514422 MAP3K19Q56UN5 1328 aa11.64□□□□□ -0.55
LINC00955-202ENST00000514422 SPATA31A1Q5TZJ5 1347 aa11.64□□□□□ -0.55
LINC00955-202ENST00000514422 WNK3Q9BYP7 1800 aa11.64□□□□□ -0.55
LINC00955-202ENST00000514422 ABCC6O95255 1503 aa11.64□□□□□ -0.55
LINC00955-202ENST00000514422 RRS1Q15050 365 aaKnown RBP11.64□□□□□ -0.55
LINC00955-202ENST00000514422 PER1O15534 1290 aaPredicted RBP11.63□□□□□ -0.55
LINC00955-202ENST00000514422 FAM98CQ17RN3 349 aaKnown RBP11.63□□□□□ -0.55
LINC00955-202ENST00000514422 USP35Q9P2H5 1018 aa11.63□□□□□ -0.55
LINC00955-202ENST00000514422 MAP2P11137 1827 aaKnown RBP11.63□□□□□ -0.55
LINC00955-202ENST00000514422 ONECUT3O60422 494 aaPredicted RBP11.62□□□□□ -0.55
LINC00955-202ENST00000514422 CRB1P82279 1406 aa11.62□□□□□ -0.55
LINC00955-202ENST00000514422 CGNL1Q0VF96 1302 aa11.62□□□□□ -0.55
LINC00955-202ENST00000514422 EP400Q96L91 3159 aa11.62□□□□□ -0.55
LINC00955-202ENST00000514422 EVA1CP58658 441 aa11.61□□□□□ -0.55
LINC00955-202ENST00000514422 AMER1Q5JTC6 1135 aaPredicted RBP11.61□□□□□ -0.55
LINC00955-202ENST00000514422 WDR17Q8IZU2 1322 aa11.61□□□□□ -0.55
LINC00955-202ENST00000514422 HOXC9P31274 260 aa11.6□□□□□ -0.55
LINC00955-202ENST00000514422 SEPT12Q8IYM1 358 aa11.6□□□□□ -0.55
LINC00955-202ENST00000514422 EMILIN1Q9Y6C2 1016 aa11.6□□□□□ -0.55
LINC00955-202ENST00000514422 ERBB3P21860 1342 aa11.6□□□□□ -0.55
LINC00955-202ENST00000514422 MAPK8IP2Q13387 824 aaPredicted RBP11.6□□□□□ -0.55
LINC00955-202ENST00000514422 IP6K1Q92551 441 aa11.6□□□□□ -0.55
LINC00955-202ENST00000514422 FAM208AQ9UK61 1670 aaKnown RBP11.6□□□□□ -0.55
LINC00955-202ENST00000514422 PARP4Q9UKK3 1724 aaKnown RBP11.59□□□□□ -0.55
LINC00955-202ENST00000514422 LRRC37A3O60309 1634 aa11.59□□□□□ -0.55
LINC00955-202ENST00000514422 TNNT2P45379 298 aaPredicted RBP11.59□□□□□ -0.55
LINC00955-202ENST00000514422 FAM182BQ5T319 152 aa11.59□□□□□ -0.55
LINC00955-202ENST00000514422 DISP2A7MBM2 1401 aa11.58□□□□□ -0.56
LINC00955-202ENST00000514422 BLMP54132 1417 aaPredicted RBP11.58□□□□□ -0.56
LINC00955-202ENST00000514422 HSP90AB2PQ58FF8 381 aa11.58□□□□□ -0.56
LINC00955-202ENST00000514422 TOM1L2Q6ZVM7 507 aa11.58□□□□□ -0.56
LINC00955-202ENST00000514422 ANKRD24Q8TF21 1146 aa11.58□□□□□ -0.56
LINC00955-202ENST00000514422 LTV1Q96GA3 475 aaPredicted RBP11.58□□□□□ -0.56
LINC00955-202ENST00000514422 BARGINQ6ZT62 677 aa11.57□□□□□ -0.56
LINC00955-202ENST00000514422 TCP11L2Q8N4U5 519 aa11.57□□□□□ -0.56
LINC00955-202ENST00000514422 POLKQ9UBT6 870 aa11.57□□□□□ -0.56
LINC00955-202ENST00000514422 RTL1A6NKG5 1358 aa11.57□□□□□ -0.56
LINC00955-202ENST00000514422 NSD2O96028 1365 aa11.57□□□□□ -0.56
LINC00955-202ENST00000514422 A0A0G2JS52 829 aa11.56□□□□□ -0.56
LINC00955-202ENST00000514422 ZNF316A6NFI3 1004 aaPredicted RBP11.56□□□□□ -0.56
LINC00955-202ENST00000514422 CSB-PGBD3P0DP91 1061 aa11.56□□□□□ -0.56
LINC00955-202ENST00000514422 AMPHP49418 695 aa11.56□□□□□ -0.56
LINC00955-202ENST00000514422 MYT1Q01538 1121 aa11.56□□□□□ -0.56
LINC00955-202ENST00000514422 DDX10Q13206 875 aaKnown RBP11.56□□□□□ -0.56
LINC00955-202ENST00000514422 CC2D1BQ5T0F9 858 aaKnown RBP11.56□□□□□ -0.56
LINC00955-202ENST00000514422 KNSTRNQ9Y448 316 aa11.56□□□□□ -0.56
LINC00955-202ENST00000514422 SMG6Q86US8 1419 aaKnown RBP11.56□□□□□ -0.56
LINC00955-202ENST00000514422 CNGB1Q14028 1251 aaPredicted RBP11.55□□□□□ -0.56
LINC00955-202ENST00000514422 UPF1Q92900 1129 aaKnown RBP eCLIP11.55□□□□□ -0.56
LINC00955-202ENST00000514422 CARD10Q9BWT7 1032 aa11.55□□□□□ -0.56
LINC00955-202ENST00000514422 FLT4P35916 1363 aa11.55□□□□□ -0.56
LINC00955-202ENST00000514422 NLRP2Q9NX02 1062 aa11.55□□□□□ -0.56
LINC00955-202ENST00000514422 INSRP06213 1382 aa11.54□□□□□ -0.56
LINC00955-202ENST00000514422 SHANK3Q9BYB0 1731 aa11.54□□□□□ -0.56
LINC00955-202ENST00000514422 PPM1GO15355 546 aaPredicted RBP11.54□□□□□ -0.56
LINC00955-202ENST00000514422 NBPF6Q5VWK0 638 aa11.54□□□□□ -0.56
LINC00955-202ENST00000514422 KRT27Q7Z3Y8 459 aa11.54□□□□□ -0.56
LINC00955-202ENST00000514422 MORC1Q86VD1 984 aa11.54□□□□□ -0.56
LINC00955-202ENST00000514422 USHBP1Q8N6Y0 703 aa11.54□□□□□ -0.56
LINC00955-202ENST00000514422 NBPF4Q96M43 638 aa11.54□□□□□ -0.56
LINC00955-202ENST00000514422 THRAP3Q9Y2W1 955 aaKnown RBP11.53□□□□□ -0.56
LINC00955-202ENST00000514422 KIF24Q5T7B8 1368 aa11.53□□□□□ -0.56
LINC00955-202ENST00000514422 MEGF6O75095 1541 aa11.53□□□□□ -0.56
LINC00955-202ENST00000514422 NPC1L1Q9UHC9 1359 aa11.52□□□□□ -0.57
LINC00955-202ENST00000514422 SBF2Q86WG5 1849 aa11.51□□□□□ -0.57
LINC00955-202ENST00000514422 TNS1Q9HBL0 1735 aaKnown RBP11.51□□□□□ -0.57
LINC00955-202ENST00000514422 RGPD1P0DJD0 1748 aa11.51□□□□□ -0.57
LINC00955-202ENST00000514422 NCAPD2Q15021 1401 aa11.51□□□□□ -0.57
LINC00955-202ENST00000514422 TNS2Q63HR2 1409 aa11.5□□□□□ -0.57
LINC00955-202ENST00000514422 EIF4A2Q14240 407 aaKnown RBP11.5□□□□□ -0.57
LINC00955-202ENST00000514422 MARCH10Q8NA82 808 aaPredicted RBP11.5□□□□□ -0.57
LINC00955-202ENST00000514422 COL3A1P02461 1466 aaPredicted RBP11.49□□□□□ -0.57
LINC00955-202ENST00000514422 DDB1Q16531 1140 aa11.49□□□□□ -0.57
LINC00955-202ENST00000514422 PTF1AQ7RTS3 328 aa11.49□□□□□ -0.57
LINC00955-202ENST00000514422 EYA1Q99502 592 aa11.49□□□□□ -0.57
LINC00955-202ENST00000514422 IL2RBP14784 551 aa11.48□□□□□ -0.57
LINC00955-202ENST00000514422 MTHFSP49914 203 aa11.48□□□□□ -0.57
LINC00955-202ENST00000514422 PKD1L3Q7Z443 1732 aa11.47□□□□□ -0.57
LINC00955-202ENST00000514422 OVOS2A0A0G2JMS6 1433 aa11.47□□□□□ -0.57
LINC00955-202ENST00000514422 PDE3BQ13370 1112 aa11.46□□□□□ -0.57
LINC00955-202ENST00000514422 CDCA7Q9BWT1 371 aaPredicted RBP11.46□□□□□ -0.57
LINC00955-202ENST00000514422 IGSF1Q8N6C5 1336 aa11.46□□□□□ -0.58
LINC00955-202ENST00000514422 IL13P35225 146 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms