RNA–Protein interactions for RNA: ENST00000514168.1

SMAD1-212, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-212ENST00000514168 COL5A2P05997 1499 aaPredicted RBP16.39■□□□□ 0.21
SMAD1-212ENST00000514168 USP35Q9P2H5 1018 aa16.38■□□□□ 0.21
SMAD1-212ENST00000514168 APBA3O96018 575 aa16.37■□□□□ 0.21
SMAD1-212ENST00000514168 TCP11L2Q8N4U5 519 aa16.37■□□□□ 0.21
SMAD1-212ENST00000514168 MON2Q7Z3U7 1717 aa16.36■□□□□ 0.21
SMAD1-212ENST00000514168 RGPD3A6NKT7 1758 aaPredicted RBP16.36■□□□□ 0.21
SMAD1-212ENST00000514168 RGPD4Q7Z3J3 1758 aa16.36■□□□□ 0.21
SMAD1-212ENST00000514168 WNK3Q9BYP7 1800 aa16.36■□□□□ 0.21
SMAD1-212ENST00000514168 ABTB2Q8N961 1025 aa16.36■□□□□ 0.21
SMAD1-212ENST00000514168 TERF2IPQ9NYB0 399 aa16.36■□□□□ 0.21
SMAD1-212ENST00000514168 LRRC37A3O60309 1634 aa16.36■□□□□ 0.21
SMAD1-212ENST00000514168 SLIT3O75094 1523 aa16.35■□□□□ 0.21
SMAD1-212ENST00000514168 HDGFL2Q7Z4V5 671 aaPredicted RBP16.35■□□□□ 0.21
SMAD1-212ENST00000514168 ZNF692Q9BU19 519 aaPredicted RBP16.35■□□□□ 0.21
SMAD1-212ENST00000514168 ANKRD36BQ8N2N9 1353 aa16.35■□□□□ 0.21
SMAD1-212ENST00000514168 PIK3C2AO00443 1686 aa16.34■□□□□ 0.21
SMAD1-212ENST00000514168 GCP02774 474 aa16.34■□□□□ 0.21
SMAD1-212ENST00000514168 CPSF1Q10570 1443 aaKnown RBP16.34■□□□□ 0.21
SMAD1-212ENST00000514168 CD163L1Q9NR16 1453 aa16.34■□□□□ 0.21
SMAD1-212ENST00000514168 EVA1CP58658 441 aa16.33■□□□□ 0.2
SMAD1-212ENST00000514168 THRAP3Q9Y2W1 955 aaKnown RBP16.33■□□□□ 0.2
SMAD1-212ENST00000514168 RGPD5Q99666 1765 aa16.33■□□□□ 0.2
SMAD1-212ENST00000514168 A0A1W2PP64 1363 aa16.32■□□□□ 0.2
SMAD1-212ENST00000514168 USP6P35125 1406 aa16.32■□□□□ 0.2
SMAD1-212ENST00000514168 CRB1P82279 1406 aa16.32■□□□□ 0.2
SMAD1-212ENST00000514168 PDE3BQ13370 1112 aa16.32■□□□□ 0.2
SMAD1-212ENST00000514168 KTN1Q86UP2 1357 aaKnown RBP16.32■□□□□ 0.2
SMAD1-212ENST00000514168 CASZ1Q86V15 1759 aa16.32■□□□□ 0.2
SMAD1-212ENST00000514168 PANK3Q9H999 370 aa16.32■□□□□ 0.2
SMAD1-212ENST00000514168 BRD4O60885 1362 aaPredicted RBP16.31■□□□□ 0.2
SMAD1-212ENST00000514168 DDX10Q13206 875 aaKnown RBP16.31■□□□□ 0.2
SMAD1-212ENST00000514168 NLRP13Q86W25 1043 aa16.31■□□□□ 0.2
SMAD1-212ENST00000514168 AATKQ6ZMQ8 1374 aa16.29■□□□□ 0.2
SMAD1-212ENST00000514168 PTF1AQ7RTS3 328 aa16.29■□□□□ 0.2
SMAD1-212ENST00000514168 CARD14Q9BXL6 1004 aa16.28■□□□□ 0.2
SMAD1-212ENST00000514168 KIF20BQ96Q89 1820 aa16.28■□□□□ 0.2
SMAD1-212ENST00000514168 OVOS2A0A0G2JMS6 1433 aa16.28■□□□□ 0.2
SMAD1-212ENST00000514168 OVOS2A0A0J9YW53 1432 aa16.28■□□□□ 0.2
SMAD1-212ENST00000514168 OVOS2Q6IE36 1432 aa16.28■□□□□ 0.2
SMAD1-212ENST00000514168 EDC4Q6P2E9 1401 aaKnown RBP16.28■□□□□ 0.2
SMAD1-212ENST00000514168 AXIN2Q9Y2T1 843 aa16.27■□□□□ 0.2
SMAD1-212ENST00000514168 NSD3Q9BZ95 1437 aa16.27■□□□□ 0.19
SMAD1-212ENST00000514168 ANO8Q9HCE9 1232 aaPredicted RBP16.26■□□□□ 0.19
SMAD1-212ENST00000514168 BCL9O00512 1426 aa16.26■□□□□ 0.19
SMAD1-212ENST00000514168 PLSCR1O15162 318 aa16.25■□□□□ 0.19
SMAD1-212ENST00000514168 NBPF14Q5TI25 921 aa16.25■□□□□ 0.19
SMAD1-212ENST00000514168 PROM2Q8N271 834 aa16.25■□□□□ 0.19
SMAD1-212ENST00000514168 KNSTRNQ9Y448 316 aa16.25■□□□□ 0.19
SMAD1-212ENST00000514168 TTC21BQ7Z4L5 1316 aa16.24■□□□□ 0.19
SMAD1-212ENST00000514168 TTC21AQ8NDW8 1320 aa16.24■□□□□ 0.19
SMAD1-212ENST00000514168 PER1O15534 1290 aaPredicted RBP16.24■□□□□ 0.19
SMAD1-212ENST00000514168 NLRP6P59044 892 aa16.24■□□□□ 0.19
SMAD1-212ENST00000514168 NFAT5O94916 1531 aa16.24■□□□□ 0.19
SMAD1-212ENST00000514168 KCNQ2O43526 872 aa16.23■□□□□ 0.19
SMAD1-212ENST00000514168 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.23■□□□□ 0.19
SMAD1-212ENST00000514168 MARCH10Q8NA82 808 aaPredicted RBP16.23■□□□□ 0.19
SMAD1-212ENST00000514168 ANKRD26Q9UPS8 1709 aa16.22■□□□□ 0.19
SMAD1-212ENST00000514168 WDR17Q8IZU2 1322 aa16.22■□□□□ 0.19
SMAD1-212ENST00000514168 ARHGEF25Q86VW2 580 aa16.22■□□□□ 0.19
SMAD1-212ENST00000514168 PDGFDQ9GZP0 370 aaPredicted RBP16.22■□□□□ 0.19
SMAD1-212ENST00000514168 SPON1Q9HCB6 807 aa16.22■□□□□ 0.19
SMAD1-212ENST00000514168 CGNL1Q0VF96 1302 aa16.21■□□□□ 0.19
SMAD1-212ENST00000514168 BCL11BQ9C0K0 894 aaPredicted RBP16.21■□□□□ 0.19
SMAD1-212ENST00000514168 USP54Q70EL1 1684 aa16.21■□□□□ 0.18
SMAD1-212ENST00000514168 DDB1Q16531 1140 aa16.2■□□□□ 0.18
SMAD1-212ENST00000514168 FYB1O15117 783 aa16.19■□□□□ 0.18
SMAD1-212ENST00000514168 TOM1L2Q6ZVM7 507 aa16.19■□□□□ 0.18
SMAD1-212ENST00000514168 NME9Q86XW9 330 aa16.19■□□□□ 0.18
SMAD1-212ENST00000514168 NSD2O96028 1365 aa16.18■□□□□ 0.18
SMAD1-212ENST00000514168 NPC1L1Q9UHC9 1359 aa16.18■□□□□ 0.18
SMAD1-212ENST00000514168 ZBTB7CA1YPR0 619 aa16.18■□□□□ 0.18
SMAD1-212ENST00000514168 YY1P25490 414 aa16.18■□□□□ 0.18
SMAD1-212ENST00000514168 AMER1Q5JTC6 1135 aaPredicted RBP16.18■□□□□ 0.18
SMAD1-212ENST00000514168 ABCC6O95255 1503 aa16.18■□□□□ 0.18
SMAD1-212ENST00000514168 USP31Q70CQ4 1352 aa16.17■□□□□ 0.18
SMAD1-212ENST00000514168 PTGER2P43116 358 aa16.17■□□□□ 0.18
SMAD1-212ENST00000514168 CARD10Q9BWT7 1032 aa16.17■□□□□ 0.18
SMAD1-212ENST00000514168 GGNBP2Q9H3C7 697 aa16.17■□□□□ 0.18
SMAD1-212ENST00000514168 NHSQ6T4R5 1651 aa16.17■□□□□ 0.18
SMAD1-212ENST00000514168 PAPPAQ13219 1627 aa16.16■□□□□ 0.18
SMAD1-212ENST00000514168 COG3Q96JB2 828 aa16.15■□□□□ 0.18
SMAD1-212ENST00000514168 CDCA7Q9BWT1 371 aaPredicted RBP16.15■□□□□ 0.18
SMAD1-212ENST00000514168 TNS2Q63HR2 1409 aa16.14■□□□□ 0.17
SMAD1-212ENST00000514168 LTN1O94822 1766 aa16.14■□□□□ 0.17
SMAD1-212ENST00000514168 CC2D1BQ5T0F9 858 aaKnown RBP16.14■□□□□ 0.17
SMAD1-212ENST00000514168 CNGB1Q14028 1251 aaPredicted RBP16.13■□□□□ 0.17
SMAD1-212ENST00000514168 KCNH5Q8NCM2 988 aa16.13■□□□□ 0.17
SMAD1-212ENST00000514168 PPP1R1BQ9UD71 204 aaPredicted RBP16.13■□□□□ 0.17
SMAD1-212ENST00000514168 BTAF1O14981 1849 aa16.12■□□□□ 0.17
SMAD1-212ENST00000514168 TXNRD1Q16881 649 aa16.12■□□□□ 0.17
SMAD1-212ENST00000514168 MORC1Q86VD1 984 aa16.12■□□□□ 0.17
SMAD1-212ENST00000514168 SGIP1Q9BQI5 828 aa16.12■□□□□ 0.17
SMAD1-212ENST00000514168 MAP2P11137 1827 aaKnown RBP16.12■□□□□ 0.17
SMAD1-212ENST00000514168 ZBTB7AO95365 584 aa16.11■□□□□ 0.17
SMAD1-212ENST00000514168 DIEXFQ68CQ4 756 aaKnown RBP16.11■□□□□ 0.17
SMAD1-212ENST00000514168 CHD4Q14839 1912 aa16.11■□□□□ 0.17
SMAD1-212ENST00000514168 KAT6BQ8WYB5 2073 aa16.09■□□□□ 0.17
SMAD1-212ENST00000514168 COL24A1Q17RW2 1714 aa16.09■□□□□ 0.17
SMAD1-212ENST00000514168 SOX12O15370 315 aa16.09■□□□□ 0.17
SMAD1-212ENST00000514168 ANP32CO43423 234 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms