RNA–Protein interactions for RNA: ENST00000514055.5

CAST-240, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-240ENST00000514055 USP19O94966 1318 aa12.58□□□□□ -0.4
CAST-240ENST00000514055 CRB1P82279 1406 aa12.57□□□□□ -0.4
CAST-240ENST00000514055 C11orf95C9JLR9 678 aaPredicted RBP12.57□□□□□ -0.4
CAST-240ENST00000514055 GCP02774 474 aa12.57□□□□□ -0.4
CAST-240ENST00000514055 CDK19Q9BWU1 502 aa12.56□□□□□ -0.4
CAST-240ENST00000514055 POLR3AO14802 1390 aaPredicted RBP12.56□□□□□ -0.4
CAST-240ENST00000514055 SHANK3Q9BYB0 1731 aa12.55□□□□□ -0.4
CAST-240ENST00000514055 TOM1L2Q6ZVM7 507 aa12.55□□□□□ -0.4
CAST-240ENST00000514055 PELP1Q8IZL8 1130 aaKnown RBP12.55□□□□□ -0.4
CAST-240ENST00000514055 KLHL34Q8N239 644 aa12.55□□□□□ -0.4
CAST-240ENST00000514055 KDM2AQ9Y2K7 1162 aa12.54□□□□□ -0.4
CAST-240ENST00000514055 MAP3K5Q99683 1374 aa12.54□□□□□ -0.4
CAST-240ENST00000514055 ITSN1Q15811 1721 aa12.54□□□□□ -0.4
CAST-240ENST00000514055 ZNF827Q17R98 1081 aa12.53□□□□□ -0.4
CAST-240ENST00000514055 SIN3AQ96ST3 1273 aa12.53□□□□□ -0.4
CAST-240ENST00000514055 AXIN2Q9Y2T1 843 aa12.53□□□□□ -0.4
CAST-240ENST00000514055 PLEKHG3A1L390 1219 aa12.52□□□□□ -0.41
CAST-240ENST00000514055 NEUROD1Q13562 356 aa12.52□□□□□ -0.41
CAST-240ENST00000514055 NLRP13Q86W25 1043 aa12.52□□□□□ -0.41
CAST-240ENST00000514055 BCL9O00512 1426 aa12.52□□□□□ -0.41
CAST-240ENST00000514055 NLGN2Q8NFZ4 835 aa12.51□□□□□ -0.41
CAST-240ENST00000514055 DCAF11Q8TEB1 546 aa12.51□□□□□ -0.41
CAST-240ENST00000514055 ACSBG1Q96GR2 724 aa12.51□□□□□ -0.41
CAST-240ENST00000514055 CCDC61Q9Y6R9 512 aa12.51□□□□□ -0.41
CAST-240ENST00000514055 TOPAZ1Q8N9V7 1692 aa12.51□□□□□ -0.41
CAST-240ENST00000514055 AATKQ6ZMQ8 1374 aa12.5□□□□□ -0.41
CAST-240ENST00000514055 ARHGEF28Q8N1W1 1705 aaKnown RBP12.49□□□□□ -0.41
CAST-240ENST00000514055 PAPPAQ13219 1627 aa12.49□□□□□ -0.41
CAST-240ENST00000514055 YBX3P16989 372 aaKnown RBP eCLIP12.49□□□□□ -0.411e-10■■■□□ 15.6
CAST-240ENST00000514055 STAC3Q96MF2 364 aa12.49□□□□□ -0.41
CAST-240ENST00000514055 WNK3Q9BYP7 1800 aa12.48□□□□□ -0.41
CAST-240ENST00000514055 WDR17Q8IZU2 1322 aa12.48□□□□□ -0.41
CAST-240ENST00000514055 LRRC4BQ9NT99 713 aa12.48□□□□□ -0.41
CAST-240ENST00000514055 COL18A1P39060 1754 aa12.48□□□□□ -0.41
CAST-240ENST00000514055 AKAP12Q02952 1782 aa12.48□□□□□ -0.41
CAST-240ENST00000514055 KIAA1210Q9ULL0 1709 aa12.48□□□□□ -0.41
CAST-240ENST00000514055 NLRP6P59044 892 aa12.47□□□□□ -0.41
CAST-240ENST00000514055 CCER1Q8TC90 406 aaPredicted RBP12.47□□□□□ -0.41
CAST-240ENST00000514055 ATP10DQ9P241 1426 aa12.46□□□□□ -0.41
CAST-240ENST00000514055 TONSLQ96HA7 1378 aa12.46□□□□□ -0.41
CAST-240ENST00000514055 CLSPNQ9HAW4 1339 aa12.46□□□□□ -0.41
CAST-240ENST00000514055 EXOC5O00471 708 aa12.46□□□□□ -0.41
CAST-240ENST00000514055 L3MBTL2Q969R5 705 aa12.46□□□□□ -0.41
CAST-240ENST00000514055 CDCA7Q9BWT1 371 aaPredicted RBP12.46□□□□□ -0.41
CAST-240ENST00000514055 SLIT3O75094 1523 aa12.46□□□□□ -0.42
CAST-240ENST00000514055 PPIP5K1Q6PFW1 1433 aa12.45□□□□□ -0.42
CAST-240ENST00000514055 CSB-PGBD3P0DP91 1061 aa12.45□□□□□ -0.42
CAST-240ENST00000514055 HSPA6P17066 643 aa12.45□□□□□ -0.42
CAST-240ENST00000514055 CARD10Q9BWT7 1032 aa12.45□□□□□ -0.42
CAST-240ENST00000514055 CABP2Q9NPB3 220 aa12.45□□□□□ -0.42
CAST-240ENST00000514055 SOX12O15370 315 aa12.44□□□□□ -0.42
CAST-240ENST00000514055 ZNF526Q8TF50 670 aaPredicted RBP12.44□□□□□ -0.42
CAST-240ENST00000514055 AKT1S1Q96B36 256 aa12.44□□□□□ -0.42
CAST-240ENST00000514055 TRPM1Q7Z4N2 1603 aa12.44□□□□□ -0.42
CAST-240ENST00000514055 PNPLA7Q6ZV29 1317 aa12.43□□□□□ -0.42
CAST-240ENST00000514055 NHSQ6T4R5 1651 aa12.43□□□□□ -0.42
CAST-240ENST00000514055 POLD1P28340 1107 aa12.43□□□□□ -0.42
CAST-240ENST00000514055 KCNQ4P56696 695 aa12.43□□□□□ -0.42
CAST-240ENST00000514055 SRPK2P78362 688 aaKnown RBP12.43□□□□□ -0.42
CAST-240ENST00000514055 CPSF1Q10570 1443 aaKnown RBP12.43□□□□□ -0.42
CAST-240ENST00000514055 ARHGEF25Q86VW2 580 aa12.42□□□□□ -0.42
CAST-240ENST00000514055 RGPD5Q99666 1765 aa12.42□□□□□ -0.42
CAST-240ENST00000514055 USP6P35125 1406 aa12.42□□□□□ -0.42
CAST-240ENST00000514055 TNS2Q63HR2 1409 aa12.42□□□□□ -0.42
CAST-240ENST00000514055 GPBP1L1Q9HC44 474 aaPredicted RBP12.41□□□□□ -0.42
CAST-240ENST00000514055 CABP1Q9NZU7 370 aa12.41□□□□□ -0.42
CAST-240ENST00000514055 BRD4O60885 1362 aaPredicted RBP12.41□□□□□ -0.42
CAST-240ENST00000514055 BTAF1O14981 1849 aa12.4□□□□□ -0.42
CAST-240ENST00000514055 GRIN3BO60391 1043 aa12.4□□□□□ -0.42
CAST-240ENST00000514055 SLC16A10Q8TF71 515 aa12.4□□□□□ -0.42
CAST-240ENST00000514055 PIK3C2AO00443 1686 aa12.4□□□□□ -0.42
CAST-240ENST00000514055 KAT6BQ8WYB5 2073 aa12.39□□□□□ -0.43
CAST-240ENST00000514055 COL24A1Q17RW2 1714 aa12.39□□□□□ -0.43
CAST-240ENST00000514055 NBPF1Q3BBV0 1214 aa12.38□□□□□ -0.43
CAST-240ENST00000514055 TFCP2L1Q9NZI6 479 aa12.38□□□□□ -0.43
CAST-240ENST00000514055 CCDC7Q96M83 1385 aa12.38□□□□□ -0.43
CAST-240ENST00000514055 TUBGCP6Q96RT7 1819 aa12.37□□□□□ -0.43
CAST-240ENST00000514055 ADCY9O60503 1353 aa12.37□□□□□ -0.43
CAST-240ENST00000514055 ABCC6O95255 1503 aa12.37□□□□□ -0.43
CAST-240ENST00000514055 MSL1Q68DK7 614 aa12.36□□□□□ -0.43
CAST-240ENST00000514055 WWC3Q9ULE0 1092 aa12.36□□□□□ -0.43
CAST-240ENST00000514055 CAPN15O75808 1086 aa12.35□□□□□ -0.43
CAST-240ENST00000514055 NLRP2Q9NX02 1062 aa12.35□□□□□ -0.43
CAST-240ENST00000514055 TIMELESSQ9UNS1 1208 aa12.35□□□□□ -0.43
CAST-240ENST00000514055 TTC21BQ7Z4L5 1316 aa12.35□□□□□ -0.43
CAST-240ENST00000514055 QSER1Q2KHR3 1735 aa12.34□□□□□ -0.43
CAST-240ENST00000514055 ROCK2O75116 1388 aaKnown RBP12.34□□□□□ -0.43
CAST-240ENST00000514055 NFAT5O94916 1531 aa12.34□□□□□ -0.43
CAST-240ENST00000514055 KIF3CO14782 793 aa12.34□□□□□ -0.43
CAST-240ENST00000514055 MSH5O43196 834 aa12.34□□□□□ -0.43
CAST-240ENST00000514055 IL2RBP14784 551 aa12.33□□□□□ -0.44
CAST-240ENST00000514055 SLC27A3Q5K4L6 730 aa12.33□□□□□ -0.44
CAST-240ENST00000514055 COL23A1Q86Y22 540 aaPredicted RBP12.33□□□□□ -0.44
CAST-240ENST00000514055 KCNH5Q8NCM2 988 aa12.33□□□□□ -0.44
CAST-240ENST00000514055 CENPJQ9HC77 1338 aaPredicted RBP12.33□□□□□ -0.44
CAST-240ENST00000514055 QRICH2Q9H0J4 1663 aa12.32□□□□□ -0.44
CAST-240ENST00000514055 DNAJC5GQ8N7S2 189 aa12.32□□□□□ -0.44
CAST-240ENST00000514055 COL13A1Q5TAT6 717 aaPredicted RBP12.31□□□□□ -0.44
CAST-240ENST00000514055 DDX54Q8TDD1 881 aaKnown RBP12.31□□□□□ -0.44
CAST-240ENST00000514055 ERBB3P21860 1342 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms