RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 STRN4Q9NRL3 753 aa15.41■□□□□ 0.06
HTT-213ENST00000513806 POLKQ9UBT6 870 aa15.41■□□□□ 0.06
HTT-213ENST00000513806 RGS17Q9UGC6 210 aaPredicted RBP15.41■□□□□ 0.06
HTT-213ENST00000513806 BCL9LQ86UU0 1499 aa15.4■□□□□ 0.06
HTT-213ENST00000513806 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.4■□□□□ 0.06
HTT-213ENST00000513806 AMPHP49418 695 aa15.4■□□□□ 0.06
HTT-213ENST00000513806 PARD3Q8TEW0 1356 aa15.39■□□□□ 0.05
HTT-213ENST00000513806 HOXC9P31274 260 aa15.39■□□□□ 0.05
HTT-213ENST00000513806 HSP90AB2PQ58FF8 381 aa15.39■□□□□ 0.05
HTT-213ENST00000513806 USP21Q9UK80 565 aa15.39■□□□□ 0.05
HTT-213ENST00000513806 COL5A2P05997 1499 aaPredicted RBP15.39■□□□□ 0.05
HTT-213ENST00000513806 AATKQ6ZMQ8 1374 aa15.38■□□□□ 0.05
HTT-213ENST00000513806 PPP2R1AP30153 589 aa15.38■□□□□ 0.05
HTT-213ENST00000513806 FNBP4Q8N3X1 1017 aaPredicted RBP15.38■□□□□ 0.05
HTT-213ENST00000513806 PHF23Q9BUL5 403 aaPredicted RBP15.38■□□□□ 0.05
HTT-213ENST00000513806 MTHFSP49914 203 aa15.37■□□□□ 0.05
HTT-213ENST00000513806 LARP1Q6PKG0 1096 aaKnown RBP15.37■□□□□ 0.05
HTT-213ENST00000513806 IP6K1Q92551 441 aa15.37■□□□□ 0.05
HTT-213ENST00000513806 SMG6Q86US8 1419 aaKnown RBP15.36■□□□□ 0.05
HTT-213ENST00000513806 UNC5CLQ8IV45 518 aa15.36■□□□□ 0.05
HTT-213ENST00000513806 PRKRIP1Q9H875 184 aaPredicted RBP15.36■□□□□ 0.05
HTT-213ENST00000513806 EVA1CP58658 441 aa15.35■□□□□ 0.05
HTT-213ENST00000513806 POTEAQ6S8J7 498 aa15.35■□□□□ 0.05
HTT-213ENST00000513806 ANKRD24Q8TF21 1146 aa15.35■□□□□ 0.05
HTT-213ENST00000513806 FLT4P35916 1363 aa15.35■□□□□ 0.05
HTT-213ENST00000513806 ABCC6O95255 1503 aa15.34■□□□□ 0.05
HTT-213ENST00000513806 GLI3P10071 1580 aa15.34■□□□□ 0.05
HTT-213ENST00000513806 CSB-PGBD3P0DP91 1061 aa15.34■□□□□ 0.05
HTT-213ENST00000513806 USP35Q9P2H5 1018 aa15.34■□□□□ 0.05
HTT-213ENST00000513806 CCDC9Q9Y3X0 531 aaKnown RBP15.34■□□□□ 0.05
HTT-213ENST00000513806 RTL1A6NKG5 1358 aa15.34■□□□□ 0.05
HTT-213ENST00000513806 WNK3Q9BYP7 1800 aa15.33■□□□□ 0.05
HTT-213ENST00000513806 CDK12Q9NYV4 1490 aaPredicted RBP15.33■□□□□ 0.05
HTT-213ENST00000513806 USHBP1Q8N6Y0 703 aa15.33■□□□□ 0.04
HTT-213ENST00000513806 QTRT2Q9H974 415 aaKnown RBP15.33■□□□□ 0.04
HTT-213ENST00000513806 ATRNO75882 1429 aa15.33■□□□□ 0.04
HTT-213ENST00000513806 BLMP54132 1417 aaPredicted RBP15.33■□□□□ 0.04
HTT-213ENST00000513806 COL3A1P02461 1466 aaPredicted RBP15.33■□□□□ 0.04
HTT-213ENST00000513806 FAM208AQ9UK61 1670 aaKnown RBP15.32■□□□□ 0.04
HTT-213ENST00000513806 EIF4A2Q14240 407 aaKnown RBP15.32■□□□□ 0.04
HTT-213ENST00000513806 RALBP1Q15311 655 aa15.32■□□□□ 0.04
HTT-213ENST00000513806 DIEXFQ68CQ4 756 aaKnown RBP15.32■□□□□ 0.04
HTT-213ENST00000513806 ERBB3P21860 1342 aa15.32■□□□□ 0.04
HTT-213ENST00000513806 INSRP06213 1382 aa15.32■□□□□ 0.04
HTT-213ENST00000513806 ANP32CO43423 234 aa15.31■□□□□ 0.04
HTT-213ENST00000513806 CCDC184Q52MB2 194 aa15.31■□□□□ 0.04
HTT-213ENST00000513806 TOM1L2Q6ZVM7 507 aa15.31■□□□□ 0.04
HTT-213ENST00000513806 RGPD1P0DJD0 1748 aa15.3■□□□□ 0.04
HTT-213ENST00000513806 ZNF772Q68DY9 489 aaPredicted RBP15.3■□□□□ 0.04
HTT-213ENST00000513806 BRWD3Q6RI45 1802 aa15.3■□□□□ 0.04
HTT-213ENST00000513806 WDR17Q8IZU2 1322 aa15.3■□□□□ 0.04
HTT-213ENST00000513806 MYBBP1AQ9BQG0 1328 aaKnown RBP15.3■□□□□ 0.04
HTT-213ENST00000513806 NLRP2Q9NX02 1062 aa15.3■□□□□ 0.04
HTT-213ENST00000513806 SPATA31A5Q5VU36 1347 aa15.29■□□□□ 0.04
HTT-213ENST00000513806 SPATA31A7Q8IWB4 1347 aa15.29■□□□□ 0.04
HTT-213ENST00000513806 VPS72Q15906 364 aa15.29■□□□□ 0.04
HTT-213ENST00000513806 NBPF6Q5VWK0 638 aa15.29■□□□□ 0.04
HTT-213ENST00000513806 NBPF4Q96M43 638 aa15.29■□□□□ 0.04
HTT-213ENST00000513806 TRPC5Q9UL62 973 aaPredicted RBP15.29■□□□□ 0.04
HTT-213ENST00000513806 CRB1P82279 1406 aa15.28■□□□□ 0.04
HTT-213ENST00000513806 KIF24Q5T7B8 1368 aa15.28■□□□□ 0.04
HTT-213ENST00000513806 SPATA31A1Q5TZJ5 1347 aa15.28■□□□□ 0.04
HTT-213ENST00000513806 IL13P35225 146 aa15.27■□□□□ 0.04
HTT-213ENST00000513806 FAM98CQ17RN3 349 aaKnown RBP15.27■□□□□ 0.04
HTT-213ENST00000513806 GJD4Q96KN9 370 aaPredicted RBP15.27■□□□□ 0.04
HTT-213ENST00000513806 EYA1Q99502 592 aa15.27■□□□□ 0.04
HTT-213ENST00000513806 DIAPH1O60610 1272 aaKnown RBP15.25■□□□□ 0.03
HTT-213ENST00000513806 AEBP1Q8IUX7 1158 aa15.25■□□□□ 0.03
HTT-213ENST00000513806 U2SURPO15042 1029 aaKnown RBP15.24■□□□□ 0.03
HTT-213ENST00000513806 HMOX1P09601 288 aa15.24■□□□□ 0.03
HTT-213ENST00000513806 CARD10Q9BWT7 1032 aa15.24■□□□□ 0.03
HTT-213ENST00000513806 THSD7AQ9UPZ6 1657 aa15.24■□□□□ 0.03
HTT-213ENST00000513806 SHANK3Q9BYB0 1731 aa15.23■□□□□ 0.03
HTT-213ENST00000513806 MEGF6O75095 1541 aa15.23■□□□□ 0.03
HTT-213ENST00000513806 A0A0G2JS52 829 aa15.23■□□□□ 0.03
HTT-213ENST00000513806 RXRBP28702 533 aa15.23■□□□□ 0.03
HTT-213ENST00000513806 MYT1Q01538 1121 aa15.23■□□□□ 0.03
HTT-213ENST00000513806 MIER1Q8N108 512 aa15.23■□□□□ 0.03
HTT-213ENST00000513806 TCP11L2Q8N4U5 519 aa15.23■□□□□ 0.03
HTT-213ENST00000513806 CFAP53Q96M91 514 aa15.23■□□□□ 0.03
HTT-213ENST00000513806 LRRC37A3O60309 1634 aa15.23■□□□□ 0.03
HTT-213ENST00000513806 PARP4Q9UKK3 1724 aaKnown RBP15.23■□□□□ 0.03
HTT-213ENST00000513806 RBM6P78332 1123 aaKnown RBP15.22■□□□□ 0.03
HTT-213ENST00000513806 RGS12O14924 1447 aa15.22■□□□□ 0.03
HTT-213ENST00000513806 IGSF1Q8N6C5 1336 aa15.21■□□□□ 0.03
HTT-213ENST00000513806 SULT6B1Q6IMI4 303 aa15.21■□□□□ 0.03
HTT-213ENST00000513806 DISP2A7MBM2 1401 aa15.2■□□□□ 0.02
HTT-213ENST00000513806 NCAPD2Q15021 1401 aa15.19■□□□□ 0.02
HTT-213ENST00000513806 FAM182BQ5T319 152 aa15.19■□□□□ 0.02
HTT-213ENST00000513806 SEPT12Q8IYM1 358 aa15.19■□□□□ 0.02
HTT-213ENST00000513806 KAT6BQ8WYB5 2073 aa15.19■□□□□ 0.02
HTT-213ENST00000513806 VIRMAQ69YN4 1812 aaKnown RBP15.18■□□□□ 0.02
HTT-213ENST00000513806 U2AF1L5P0DN76 240 aaPredicted RBP15.18■□□□□ 0.02
HTT-213ENST00000513806 IL2RBP14784 551 aa15.18■□□□□ 0.02
HTT-213ENST00000513806 U2AF1Q01081 240 aaKnown RBP eCLIP15.18■□□□□ 0.02
HTT-213ENST00000513806 BARGINQ6ZT62 677 aa15.18■□□□□ 0.02
HTT-213ENST00000513806 MRS2Q9HD23 443 aa15.18■□□□□ 0.02
HTT-213ENST00000513806 PKD1L3Q7Z443 1732 aa15.17■□□□□ 0.02
HTT-213ENST00000513806 SENP3-EIF4A1A0A087X0R7 540 aa15.17■□□□□ 0.02
HTT-213ENST00000513806 ILDR2Q71H61 639 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms