RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 PLEKHH1Q9ULM0 1364 aa13.27□□□□□ -0.29
TPM3-221ENST00000513769 PTPRUQ92729 1446 aa13.27□□□□□ -0.29
TPM3-221ENST00000513769 NPHP4O75161 1426 aaPredicted RBP13.26□□□□□ -0.29
TPM3-221ENST00000513769 MORC1Q86VD1 984 aa13.26□□□□□ -0.29
TPM3-221ENST00000513769 MYOM1P52179 1685 aa13.25□□□□□ -0.29
TPM3-221ENST00000513769 MED1Q15648 1581 aaPredicted RBP13.25□□□□□ -0.29
TPM3-221ENST00000513769 FAM9BQ8IZU0 186 aa13.25□□□□□ -0.29
TPM3-221ENST00000513769 ATP7BP35670 1465 aa13.23□□□□□ -0.29
TPM3-221ENST00000513769 CPSF1Q10570 1443 aaKnown RBP13.23□□□□□ -0.29
TPM3-221ENST00000513769 FYB1O15117 783 aa13.23□□□□□ -0.29
TPM3-221ENST00000513769 ECM2O94769 699 aaPredicted RBP13.23□□□□□ -0.29
TPM3-221ENST00000513769 NCOA3Q9Y6Q9 1424 aa13.22□□□□□ -0.29
TPM3-221ENST00000513769 NGEFQ8N5V2 710 aa13.22□□□□□ -0.29
TPM3-221ENST00000513769 CHD2O14647 1828 aaKnown RBP13.22□□□□□ -0.29
TPM3-221ENST00000513769 NSD3Q9BZ95 1437 aa13.22□□□□□ -0.29
TPM3-221ENST00000513769 USP32Q8NFA0 1604 aa13.21□□□□□ -0.29
TPM3-221ENST00000513769 ADGRB2O60241 1585 aa13.21□□□□□ -0.29
TPM3-221ENST00000513769 G3V3G9 751 aa13.21□□□□□ -0.29
TPM3-221ENST00000513769 A0A1W2PP64 1363 aa13.2□□□□□ -0.3
TPM3-221ENST00000513769 ST18O60284 1047 aa13.2□□□□□ -0.3
TPM3-221ENST00000513769 CNGB1Q14028 1251 aaPredicted RBP13.2□□□□□ -0.3
TPM3-221ENST00000513769 BOLA1Q9Y3E2 137 aa13.2□□□□□ -0.3
TPM3-221ENST00000513769 PPIP5K1Q6PFW1 1433 aa13.2□□□□□ -0.3
TPM3-221ENST00000513769 POLR3AO14802 1390 aaPredicted RBP13.2□□□□□ -0.3
TPM3-221ENST00000513769 CD163L1Q9NR16 1453 aa13.19□□□□□ -0.3
TPM3-221ENST00000513769 HNRNPUQ00839 825 aaKnown RBP eCLIP13.19□□□□□ -0.3
TPM3-221ENST00000513769 CFAP53Q96M91 514 aa13.19□□□□□ -0.3
TPM3-221ENST00000513769 ANKARQ7Z5J8 1434 aa13.19□□□□□ -0.3
TPM3-221ENST00000513769 C19orf44Q9H6X5 657 aa13.18□□□□□ -0.3
TPM3-221ENST00000513769 TAOK2Q9UL54 1235 aa13.18□□□□□ -0.3
TPM3-221ENST00000513769 EDC4Q6P2E9 1401 aaKnown RBP13.18□□□□□ -0.3
TPM3-221ENST00000513769 XRN1Q8IZH2 1706 aaKnown RBP13.18□□□□□ -0.3
TPM3-221ENST00000513769 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.18□□□□□ -0.3
TPM3-221ENST00000513769 ZBED9Q6R2W3 1325 aa13.17□□□□□ -0.3
TPM3-221ENST00000513769 PROSER2Q86WR7 435 aaPredicted RBP13.17□□□□□ -0.3
TPM3-221ENST00000513769 ACEP12821 1306 aa13.16□□□□□ -0.3
TPM3-221ENST00000513769 TTC21AQ8NDW8 1320 aa13.16□□□□□ -0.3
TPM3-221ENST00000513769 PRR36Q9H6K5 1346 aa13.16□□□□□ -0.3
TPM3-221ENST00000513769 SNPHO15079 494 aa13.16□□□□□ -0.3
TPM3-221ENST00000513769 SOX12O15370 315 aa13.16□□□□□ -0.3
TPM3-221ENST00000513769 PDE3BQ13370 1112 aa13.16□□□□□ -0.3
TPM3-221ENST00000513769 WDR43Q15061 677 aaKnown RBP eCLIP13.16□□□□□ -0.3
TPM3-221ENST00000513769 LRRC7Q96NW7 1537 aa13.16□□□□□ -0.3
TPM3-221ENST00000513769 MTHFSP49914 203 aa13.15□□□□□ -0.3
TPM3-221ENST00000513769 BCL11BQ9C0K0 894 aaPredicted RBP13.15□□□□□ -0.3
TPM3-221ENST00000513769 PNNQ9H307 717 aaKnown RBP13.15□□□□□ -0.3
TPM3-221ENST00000513769 PLSCR2Q9NRY7 297 aa13.15□□□□□ -0.3
TPM3-221ENST00000513769 NGDNQ8NEJ9 315 aaKnown RBP13.14□□□□□ -0.31
TPM3-221ENST00000513769 COG3Q96JB2 828 aa13.14□□□□□ -0.31
TPM3-221ENST00000513769 ADAMTS8Q9UP79 889 aa13.14□□□□□ -0.31
TPM3-221ENST00000513769 NUDCQ9Y266 331 aa13.14□□□□□ -0.31
TPM3-221ENST00000513769 CDC42BPGQ6DT37 1551 aa13.14□□□□□ -0.31
TPM3-221ENST00000513769 AATKQ6ZMQ8 1374 aa13.13□□□□□ -0.31
TPM3-221ENST00000513769 RGL2O15211 777 aa13.13□□□□□ -0.31
TPM3-221ENST00000513769 GGNBP2Q9H3C7 697 aa13.13□□□□□ -0.31
TPM3-221ENST00000513769 PHF8Q9UPP1 1060 aa13.13□□□□□ -0.31
TPM3-221ENST00000513769 TTC21BQ7Z4L5 1316 aa13.13□□□□□ -0.31
TPM3-221ENST00000513769 PCDH10Q9P2E7 1040 aa13.12□□□□□ -0.31
TPM3-221ENST00000513769 STK24Q9Y6E0 443 aa13.12□□□□□ -0.31
TPM3-221ENST00000513769 NKTRP30414 1462 aaKnown RBP13.11□□□□□ -0.31
TPM3-221ENST00000513769 PNPLA6Q8IY17 1366 aa13.11□□□□□ -0.31
TPM3-221ENST00000513769 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.11□□□□□ -0.31
TPM3-221ENST00000513769 MS4A4AQ96JQ5 239 aa13.11□□□□□ -0.31
TPM3-221ENST00000513769 STRCP1A6NGW2 1772 aa13.11□□□□□ -0.31
TPM3-221ENST00000513769 ADGRL3Q9HAR2 1447 aa13.11□□□□□ -0.31
TPM3-221ENST00000513769 TMEM121BQ9BXQ6 578 aaPredicted RBP13.1□□□□□ -0.31
TPM3-221ENST00000513769 SSH2Q76I76 1423 aa13.1□□□□□ -0.31
TPM3-221ENST00000513769 NWD1Q149M9 1564 aa13.1□□□□□ -0.31
TPM3-221ENST00000513769 STK25O00506 426 aa13.09□□□□□ -0.31
TPM3-221ENST00000513769 USP6P35125 1406 aa13.09□□□□□ -0.31
TPM3-221ENST00000513769 C14orf37Q86TY3 774 aa13.09□□□□□ -0.31
TPM3-221ENST00000513769 CADPS2Q86UW7 1296 aa13.09□□□□□ -0.31
TPM3-221ENST00000513769 USP31Q70CQ4 1352 aa13.08□□□□□ -0.31
TPM3-221ENST00000513769 ATF3P18847 181 aa13.08□□□□□ -0.32
TPM3-221ENST00000513769 POLKQ9UBT6 870 aa13.08□□□□□ -0.32
TPM3-221ENST00000513769 RGS17Q9UGC6 210 aaPredicted RBP13.08□□□□□ -0.32
TPM3-221ENST00000513769 TNNT2P45379 298 aaPredicted RBP13.07□□□□□ -0.32
TPM3-221ENST00000513769 PSME1Q06323 249 aa13.07□□□□□ -0.32
TPM3-221ENST00000513769 MICALL2Q8IY33 904 aa13.07□□□□□ -0.32
TPM3-221ENST00000513769 PMFBP1Q8TBY8 1022 aa13.07□□□□□ -0.32
TPM3-221ENST00000513769 ITSN1Q15811 1721 aa13.07□□□□□ -0.32
TPM3-221ENST00000513769 AKAP12Q02952 1782 aa13.07□□□□□ -0.32
TPM3-221ENST00000513769 DCCP43146 1447 aa13.06□□□□□ -0.32
TPM3-221ENST00000513769 NUTM2FA1L443 756 aa13.06□□□□□ -0.32
TPM3-221ENST00000513769 DIAPH1O60610 1272 aaKnown RBP13.06□□□□□ -0.32
TPM3-221ENST00000513769 FCHSD2O94868 740 aa13.06□□□□□ -0.32
TPM3-221ENST00000513769 ESCO1Q5FWF5 840 aa13.06□□□□□ -0.32
TPM3-221ENST00000513769 NME9Q86XW9 330 aa13.06□□□□□ -0.32
TPM3-221ENST00000513769 RUNDC1Q96C34 613 aa13.06□□□□□ -0.32
TPM3-221ENST00000513769 BLMP54132 1417 aaPredicted RBP13.05□□□□□ -0.32
TPM3-221ENST00000513769 TOPAZ1Q8N9V7 1692 aa13.05□□□□□ -0.32
TPM3-221ENST00000513769 MON2Q7Z3U7 1717 aa13.05□□□□□ -0.32
TPM3-221ENST00000513769 FMN2Q9NZ56 1722 aa13.05□□□□□ -0.32
TPM3-221ENST00000513769 ANKRD26Q9UPS8 1709 aa13.05□□□□□ -0.32
TPM3-221ENST00000513769 NLRP6P59044 892 aa13.04□□□□□ -0.32
TPM3-221ENST00000513769 KIF24Q5T7B8 1368 aa13.04□□□□□ -0.32
TPM3-221ENST00000513769 CCDC27Q2M243 656 aa13.03□□□□□ -0.32
TPM3-221ENST00000513769 ABTB2Q8N961 1025 aa13.03□□□□□ -0.32
TPM3-221ENST00000513769 TMEM94Q12767 1356 aa13.03□□□□□ -0.32
TPM3-221ENST00000513769 POTEAQ6S8J7 498 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms