RNA–Protein interactions for RNA: ENST00000513557.5

GYPB-214, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 277 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-214ENST00000513557 LINC01559Q495D7 138 aa6.99□□□□□ -1.29
GYPB-214ENST00000513557 TMEM164Q5U3C3 297 aa6.99□□□□□ -1.29
GYPB-214ENST00000513557 B4GALNT3Q6L9W6 998 aa6.99□□□□□ -1.29
GYPB-214ENST00000513557 LARP1Q6PKG0 1096 aaKnown RBP6.99□□□□□ -1.29
GYPB-214ENST00000513557 SH3RF1Q7Z6J0 888 aa6.99□□□□□ -1.29
GYPB-214ENST00000513557 NKX2-3Q8TAU0 364 aa6.99□□□□□ -1.29
GYPB-214ENST00000513557 STK32AQ8WU08 396 aa6.99□□□□□ -1.29
GYPB-214ENST00000513557 CHIC2Q9UKJ5 165 aa6.99□□□□□ -1.29
GYPB-214ENST00000513557 ZMIZ1Q9ULJ6 1067 aa6.99□□□□□ -1.29
GYPB-214ENST00000513557 EML3Q32P44 896 aa6.98□□□□□ -1.29
GYPB-214ENST00000513557 CRTC2Q53ET0 693 aaPredicted RBP6.98□□□□□ -1.29
GYPB-214ENST00000513557 ZNF511Q8NB15 262 aa6.98□□□□□ -1.29
GYPB-214ENST00000513557 USP17L15C9J2P7 530 aa6.97□□□□□ -1.29
GYPB-214ENST00000513557 USP17L10C9JJH3 530 aa6.97□□□□□ -1.29
GYPB-214ENST00000513557 USP17L13C9JLJ4 530 aa6.97□□□□□ -1.29
GYPB-214ENST00000513557 USP17L12C9JPN9 530 aa6.97□□□□□ -1.29
GYPB-214ENST00000513557 USP17L11C9JVI0 530 aa6.97□□□□□ -1.29
GYPB-214ENST00000513557 USP17L21D6R901 530 aa6.97□□□□□ -1.29
GYPB-214ENST00000513557 USP17L18D6R9N7 530 aa6.97□□□□□ -1.29
GYPB-214ENST00000513557 USP17L22D6RA61 530 aa6.97□□□□□ -1.29
GYPB-214ENST00000513557 USP17L17D6RBQ6 530 aa6.97□□□□□ -1.29
GYPB-214ENST00000513557 USP17L19D6RCP7 530 aa6.97□□□□□ -1.29
GYPB-214ENST00000513557 USP17L20D6RJB6 530 aa6.97□□□□□ -1.29
GYPB-214ENST00000513557 RANGAP1P46060 587 aaPredicted RBP6.97□□□□□ -1.29
GYPB-214ENST00000513557 USP17L24Q0WX57 530 aa6.97□□□□□ -1.29
GYPB-214ENST00000513557 ERFEQ4G0M1 354 aa6.97□□□□□ -1.29
GYPB-214ENST00000513557 NPM2Q86SE8 214 aaKnown RBP6.97□□□□□ -1.29
GYPB-214ENST00000513557 CDAN1Q8IWY9 1227 aa6.97□□□□□ -1.29
GYPB-214ENST00000513557 FOXJ1Q92949 421 aa6.97□□□□□ -1.29
GYPB-214ENST00000513557 SLC10A4Q96EP9 437 aa6.97□□□□□ -1.29
GYPB-214ENST00000513557 PTK7Q13308 1070 aa6.96□□□□□ -1.3
GYPB-214ENST00000513557 TRIM50Q86XT4 487 aa6.96□□□□□ -1.3
GYPB-214ENST00000513557 FAM200AQ8TCP9 573 aa6.96□□□□□ -1.3
GYPB-214ENST00000513557 DOLKQ9UPQ8 538 aa6.96□□□□□ -1.3
GYPB-214ENST00000513557 NOD1Q9Y239 953 aa6.96□□□□□ -1.3
GYPB-214ENST00000513557 GIGYF1O75420 1035 aaPredicted RBP6.95□□□□□ -1.3
GYPB-214ENST00000513557 NBPF20Q3BBV1 942 aa6.95□□□□□ -1.3
GYPB-214ENST00000513557 TSGA10IPQ3SY00 556 aa6.95□□□□□ -1.3
GYPB-214ENST00000513557 C4orf48Q5BLP8 95 aa6.95□□□□□ -1.3
GYPB-214ENST00000513557 RNF20Q5VTR2 975 aa6.95□□□□□ -1.3
GYPB-214ENST00000513557 TRAF7Q6Q0C0 670 aa6.95□□□□□ -1.3
GYPB-214ENST00000513557 ANKMY2Q8IV38 441 aa6.95□□□□□ -1.3
GYPB-214ENST00000513557 OGFOD1Q8N543 542 aa6.95□□□□□ -1.3
GYPB-214ENST00000513557 CDCA7Q9BWT1 371 aaPredicted RBP6.95□□□□□ -1.3
GYPB-214ENST00000513557 IVNS1ABPQ9Y6Y0 642 aa6.95□□□□□ -1.3
GYPB-214ENST00000513557 ATP1A2P50993 1020 aa6.94□□□□□ -1.3
GYPB-214ENST00000513557 MFAP1P55081 439 aaKnown RBP6.94□□□□□ -1.3
GYPB-214ENST00000513557 OXLD1Q5BKU9 147 aa6.94□□□□□ -1.3
GYPB-214ENST00000513557 ZNF594Q96JF6 807 aaPredicted RBP6.94□□□□□ -1.3
GYPB-214ENST00000513557 CCDC85AQ96PX6 553 aaPredicted RBP6.94□□□□□ -1.3
GYPB-214ENST00000513557 C1QTNF2Q9BXJ5 285 aa6.94□□□□□ -1.3
GYPB-214ENST00000513557 SH3BP2P78314 561 aa6.93□□□□□ -1.3
GYPB-214ENST00000513557 CLDN10P78369 228 aa6.93□□□□□ -1.3
GYPB-214ENST00000513557 KCNC4Q03721 635 aa6.93□□□□□ -1.3
GYPB-214ENST00000513557 DPYDQ12882 1025 aa6.93□□□□□ -1.3
GYPB-214ENST00000513557 POTEGQ6S5H5 508 aa6.93□□□□□ -1.3
GYPB-214ENST00000513557 DNAAF2Q9NVR5 837 aaKnown RBP6.93□□□□□ -1.3
GYPB-214ENST00000513557 CDV3Q9UKY7 258 aaKnown RBP6.93□□□□□ -1.3
GYPB-214ENST00000513557 ZBTB24O43167 697 aaPredicted RBP6.92□□□□□ -1.3
GYPB-214ENST00000513557 TRMT44Q8IYL2 757 aaKnown RBP6.92□□□□□ -1.3
GYPB-214ENST00000513557 LARGE2Q8N3Y3 721 aa6.92□□□□□ -1.3
GYPB-214ENST00000513557 PPEF1O14829 653 aaPredicted RBP6.91□□□□□ -1.3
GYPB-214ENST00000513557 GGCXP38435 758 aa6.91□□□□□ -1.3
GYPB-214ENST00000513557 GTF2IP78347 998 aa6.91□□□□□ -1.3
GYPB-214ENST00000513557 FAM69CQ0P6D2 419 aa6.91□□□□□ -1.3
GYPB-214ENST00000513557 TRIM32Q13049 653 aa6.91□□□□□ -1.3
GYPB-214ENST00000513557 CCDC125Q86Z20 511 aa6.91□□□□□ -1.3
GYPB-214ENST00000513557 SEPT12Q8IYM1 358 aa6.91□□□□□ -1.3
GYPB-214ENST00000513557 CLP1Q92989 425 aaKnown RBP6.91□□□□□ -1.3
GYPB-214ENST00000513557 PCDH10Q9P2E7 1040 aa6.91□□□□□ -1.3
GYPB-214ENST00000513557 GNEQ9Y223 722 aaKnown RBP6.91□□□□□ -1.3
GYPB-214ENST00000513557 RBM19Q9Y4C8 960 aaKnown RBP6.91□□□□□ -1.3
GYPB-214ENST00000513557 PCDHB11Q9Y5F2 797 aa6.91□□□□□ -1.3
GYPB-214ENST00000513557 ESPNB1AK53 854 aa6.9□□□□□ -1.3
GYPB-214ENST00000513557 RNF223E7ERA6 249 aa6.9□□□□□ -1.3
GYPB-214ENST00000513557 SSFA2P28290 1259 aa6.9□□□□□ -1.3
GYPB-214ENST00000513557 USP4Q13107 963 aa6.9□□□□□ -1.3
GYPB-214ENST00000513557 SND1Q7KZF4 910 aaKnown RBP eCLIP6.9□□□□□ -1.35e-6■■■□□ 15.5
GYPB-214ENST00000513557 CCER1Q8TC90 406 aaPredicted RBP6.9□□□□□ -1.3
GYPB-214ENST00000513557 SIRT1Q96EB6 747 aa6.9□□□□□ -1.3
GYPB-214ENST00000513557 HCSTQ9UBK5 93 aa6.9□□□□□ -1.3
GYPB-214ENST00000513557 ITGBL1O95965 494 aaPredicted RBP6.89□□□□□ -1.31
GYPB-214ENST00000513557 PSME1Q06323 249 aa6.89□□□□□ -1.31
GYPB-214ENST00000513557 SWI5Q1ZZU3 235 aa6.89□□□□□ -1.31
GYPB-214ENST00000513557 PHLDB3Q6NSJ2 640 aa6.89□□□□□ -1.31
GYPB-214ENST00000513557 SIX5Q8N196 739 aa6.89□□□□□ -1.31
GYPB-214ENST00000513557 ANKLE1Q8NAG6 615 aa6.89□□□□□ -1.31
GYPB-214ENST00000513557 RGS22Q8NE09 1264 aa6.89□□□□□ -1.31
GYPB-214ENST00000513557 KIAA1024Q9UPX6 916 aa6.89□□□□□ -1.31
GYPB-214ENST00000513557 MTMR7Q9Y216 660 aa6.89□□□□□ -1.31
GYPB-214ENST00000513557 ZBTB7BO15156 539 aaPredicted RBP6.88□□□□□ -1.31
GYPB-214ENST00000513557 ATP2B4P23634 1241 aa6.88□□□□□ -1.31
GYPB-214ENST00000513557 VARSP26640 1264 aaKnown RBP6.88□□□□□ -1.31
GYPB-214ENST00000513557 ARID4AP29374 1257 aaPredicted RBP6.88□□□□□ -1.31
GYPB-214ENST00000513557 SEC13P55735 322 aa6.88□□□□□ -1.31
GYPB-214ENST00000513557 WNT7BP56706 349 aa6.88□□□□□ -1.31
GYPB-214ENST00000513557 RAB15P59190 212 aa6.88□□□□□ -1.31
GYPB-214ENST00000513557 CCDC27Q2M243 656 aa6.88□□□□□ -1.31
GYPB-214ENST00000513557 CCDC102BQ68D86 513 aa6.88□□□□□ -1.31
GYPB-214ENST00000513557 TPCN2Q8NHX9 752 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 592.8 ms