RNA–Protein interactions for RNA: ENST00000513507.5

APBB3-220, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 3

Gene APBB3, Length 723 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-220ENST00000513507 DEFB132Q7Z7B7 95 aa21.97■■□□□ 1.11
APBB3-220ENST00000513507 WDR17Q8IZU2 1322 aa21.97■■□□□ 1.11
APBB3-220ENST00000513507 OVOS2A0A0J9YW53 1432 aa21.97■■□□□ 1.11
APBB3-220ENST00000513507 OVOS2Q6IE36 1432 aa21.97■■□□□ 1.11
APBB3-220ENST00000513507 SF3B2Q13435 895 aaKnown RBP21.96■■□□□ 1.11
APBB3-220ENST00000513507 ZRANB1Q9UGI0 708 aa21.96■■□□□ 1.11
APBB3-220ENST00000513507 PEAK1Q9H792 1746 aa21.96■■□□□ 1.11
APBB3-220ENST00000513507 LTN1O94822 1766 aa21.96■■□□□ 1.11
APBB3-220ENST00000513507 USP47Q96K76 1375 aa21.96■■□□□ 1.11
APBB3-220ENST00000513507 NME9Q86XW9 330 aa21.94■■□□□ 1.1
APBB3-220ENST00000513507 TMC1Q8TDI8 760 aa21.94■■□□□ 1.1
APBB3-220ENST00000513507 USP35Q9P2H5 1018 aa21.94■■□□□ 1.1
APBB3-220ENST00000513507 C11orf95C9JLR9 678 aaPredicted RBP21.93■■□□□ 1.1
APBB3-220ENST00000513507 FAM182BQ5T319 152 aa21.93■■□□□ 1.1
APBB3-220ENST00000513507 SBF2Q86WG5 1849 aa21.93■■□□□ 1.1
APBB3-220ENST00000513507 LRRC37A3O60309 1634 aa21.92■■□□□ 1.1
APBB3-220ENST00000513507 BAG6P46379 1132 aa21.92■■□□□ 1.1
APBB3-220ENST00000513507 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.92■■□□□ 1.1
APBB3-220ENST00000513507 CARD10Q9BWT7 1032 aa21.92■■□□□ 1.1
APBB3-220ENST00000513507 ANKRD36BQ8N2N9 1353 aa21.91■■□□□ 1.1
APBB3-220ENST00000513507 CDCA7Q9BWT1 371 aaPredicted RBP21.91■■□□□ 1.1
APBB3-220ENST00000513507 BCL9O00512 1426 aa21.9■■□□□ 1.1
APBB3-220ENST00000513507 TMF1P82094 1093 aa21.9■■□□□ 1.1
APBB3-220ENST00000513507 PDE3BQ13370 1112 aa21.9■■□□□ 1.1
APBB3-220ENST00000513507 TOM1L2Q6ZVM7 507 aa21.88■■□□□ 1.09
APBB3-220ENST00000513507 CAMKK2Q96RR4 588 aa21.87■■□□□ 1.09
APBB3-220ENST00000513507 PARD3Q8TEW0 1356 aa21.87■■□□□ 1.09
APBB3-220ENST00000513507 CCDC7Q96M83 1385 aa21.87■■□□□ 1.09
APBB3-220ENST00000513507 RREB1Q92766 1687 aa21.86■■□□□ 1.09
APBB3-220ENST00000513507 CDCA8Q53HL2 280 aa21.86■■□□□ 1.09
APBB3-220ENST00000513507 PCGF6Q9BYE7 350 aa21.86■■□□□ 1.09
APBB3-220ENST00000513507 MYOM1P52179 1685 aa21.85■■□□□ 1.09
APBB3-220ENST00000513507 ERBB3P21860 1342 aa21.85■■□□□ 1.09
APBB3-220ENST00000513507 RGPD3A6NKT7 1758 aaPredicted RBP21.85■■□□□ 1.09
APBB3-220ENST00000513507 RGPD4Q7Z3J3 1758 aa21.85■■□□□ 1.09
APBB3-220ENST00000513507 ZBTB7CA1YPR0 619 aa21.85■■□□□ 1.09
APBB3-220ENST00000513507 EN1Q05925 392 aaPredicted RBP21.85■■□□□ 1.09
APBB3-220ENST00000513507 TRIM37O94972 964 aa21.84■■□□□ 1.09
APBB3-220ENST00000513507 OVOS2A0A0G2JMS6 1433 aa21.83■■□□□ 1.09
APBB3-220ENST00000513507 SRCAPQ6ZRS2 3230 aa21.83■■□□□ 1.09
APBB3-220ENST00000513507 FAM208AQ9UK61 1670 aaKnown RBP21.83■■□□□ 1.09
APBB3-220ENST00000513507 DDB1Q16531 1140 aa21.83■■□□□ 1.09
APBB3-220ENST00000513507 SOX12O15370 315 aa21.82■■□□□ 1.08
APBB3-220ENST00000513507 IP6K1Q92551 441 aa21.82■■□□□ 1.08
APBB3-220ENST00000513507 FYB1O15117 783 aa21.81■■□□□ 1.08
APBB3-220ENST00000513507 KIF20BQ96Q89 1820 aa21.79■■□□□ 1.08
APBB3-220ENST00000513507 EZH2Q15910 746 aaKnown RBP21.79■■□□□ 1.08
APBB3-220ENST00000513507 MARCH10Q8NA82 808 aaPredicted RBP21.79■■□□□ 1.08
APBB3-220ENST00000513507 COG3Q96JB2 828 aa21.79■■□□□ 1.08
APBB3-220ENST00000513507 LRP5O75197 1615 aa21.79■■□□□ 1.08
APBB3-220ENST00000513507 NUP188Q5SRE5 1749 aa21.78■■□□□ 1.08
APBB3-220ENST00000513507 APBA3O96018 575 aa21.78■■□□□ 1.08
APBB3-220ENST00000513507 PLSCR1O15162 318 aa21.77■■□□□ 1.08
APBB3-220ENST00000513507 CSB-PGBD3P0DP91 1061 aa21.77■■□□□ 1.08
APBB3-220ENST00000513507 TNS2Q63HR2 1409 aa21.77■■□□□ 1.08
APBB3-220ENST00000513507 ANKRD24Q8TF21 1146 aa21.76■■□□□ 1.07
APBB3-220ENST00000513507 MAP3K19Q56UN5 1328 aa21.76■■□□□ 1.07
APBB3-220ENST00000513507 EXOC5O00471 708 aa21.75■■□□□ 1.07
APBB3-220ENST00000513507 CARD14Q9BXL6 1004 aa21.75■■□□□ 1.07
APBB3-220ENST00000513507 BCL11BQ9C0K0 894 aaPredicted RBP21.75■■□□□ 1.07
APBB3-220ENST00000513507 RTL1A6NKG5 1358 aa21.74■■□□□ 1.07
APBB3-220ENST00000513507 HOXC9P31274 260 aa21.73■■□□□ 1.07
APBB3-220ENST00000513507 RGPD2P0DJD1 1756 aa21.73■■□□□ 1.07
APBB3-220ENST00000513507 KIF24Q5T7B8 1368 aa21.73■■□□□ 1.07
APBB3-220ENST00000513507 IL2RBP14784 551 aa21.72■■□□□ 1.07
APBB3-220ENST00000513507 CCER1Q8TC90 406 aaPredicted RBP21.71■■□□□ 1.07
APBB3-220ENST00000513507 NLRP2Q9NX02 1062 aa21.71■■□□□ 1.07
APBB3-220ENST00000513507 NHSQ6T4R5 1651 aa21.7■■□□□ 1.06
APBB3-220ENST00000513507 ANKRD26Q9UPS8 1709 aa21.69■■□□□ 1.06
APBB3-220ENST00000513507 FBLN1P23142 703 aa21.69■■□□□ 1.06
APBB3-220ENST00000513507 GGNBP2Q9H3C7 697 aa21.69■■□□□ 1.06
APBB3-220ENST00000513507 EIF4G2P78344 907 aaKnown RBP eCLIP21.68■■□□□ 1.06
APBB3-220ENST00000513507 PTF1AQ7RTS3 328 aa21.68■■□□□ 1.06
APBB3-220ENST00000513507 SHANK3Q9BYB0 1731 aa21.66■■□□□ 1.06
APBB3-220ENST00000513507 PSDA5PKW4 1024 aaPredicted RBP21.66■■□□□ 1.06
APBB3-220ENST00000513507 PROM2Q8N271 834 aa21.66■■□□□ 1.06
APBB3-220ENST00000513507 MAP2P11137 1827 aaKnown RBP21.66■■□□□ 1.06
APBB3-220ENST00000513507 NSD3Q9BZ95 1437 aa21.65■■□□□ 1.06
APBB3-220ENST00000513507 INSRP06213 1382 aa21.65■■□□□ 1.06
APBB3-220ENST00000513507 HSPA5P11021 654 aaKnown RBP21.65■■□□□ 1.06
APBB3-220ENST00000513507 AMPHP49418 695 aa21.65■■□□□ 1.06
APBB3-220ENST00000513507 R3HDM1Q15032 1099 aaKnown RBP21.65■■□□□ 1.06
APBB3-220ENST00000513507 RRS1Q15050 365 aaKnown RBP21.63■■□□□ 1.05
APBB3-220ENST00000513507 NBPF14Q5TI25 921 aa21.62■■□□□ 1.05
APBB3-220ENST00000513507 BTAF1O14981 1849 aa21.62■■□□□ 1.05
APBB3-220ENST00000513507 FLT4P35916 1363 aa21.61■■□□□ 1.05
APBB3-220ENST00000513507 NCAPD2Q15021 1401 aa21.61■■□□□ 1.05
APBB3-220ENST00000513507 KAT6BQ8WYB5 2073 aa21.6■■□□□ 1.05
APBB3-220ENST00000513507 KCNQ2O43526 872 aa21.6■■□□□ 1.05
APBB3-220ENST00000513507 NBPF6Q5VWK0 638 aa21.6■■□□□ 1.05
APBB3-220ENST00000513507 NBPF4Q96M43 638 aa21.6■■□□□ 1.05
APBB3-220ENST00000513507 CGNL1Q0VF96 1302 aa21.59■■□□□ 1.05
APBB3-220ENST00000513507 HSP90AB2PQ58FF8 381 aa21.58■■□□□ 1.05
APBB3-220ENST00000513507 LTV1Q96GA3 475 aaPredicted RBP21.58■■□□□ 1.05
APBB3-220ENST00000513507 MEGF6O75095 1541 aa21.58■■□□□ 1.04
APBB3-220ENST00000513507 CASZ1Q86V15 1759 aa21.58■■□□□ 1.04
APBB3-220ENST00000513507 WASHC2AQ641Q2 1341 aa21.56■■□□□ 1.04
APBB3-220ENST00000513507 TXNRD1Q16881 649 aa21.56■■□□□ 1.04
APBB3-220ENST00000513507 PAPPAQ13219 1627 aa21.55■■□□□ 1.04
APBB3-220ENST00000513507 SMG6Q86US8 1419 aaKnown RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms