RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 AATKQ6ZMQ8 1374 aa20.33■□□□□ 0.84
SPCS3-204ENST00000513139 COL18A1P39060 1754 aa20.32■□□□□ 0.84
SPCS3-204ENST00000513139 DDB1Q16531 1140 aa20.32■□□□□ 0.84
SPCS3-204ENST00000513139 BCL9O00512 1426 aa20.32■□□□□ 0.84
SPCS3-204ENST00000513139 PPIP5K1Q6PFW1 1433 aa20.31■□□□□ 0.84
SPCS3-204ENST00000513139 ANO8Q9HCE9 1232 aaPredicted RBP20.31■□□□□ 0.84
SPCS3-204ENST00000513139 SLIT3O75094 1523 aa20.31■□□□□ 0.84
SPCS3-204ENST00000513139 MYOM1P52179 1685 aa20.3■□□□□ 0.84
SPCS3-204ENST00000513139 CDCA7Q9BWT1 371 aaPredicted RBP20.28■□□□□ 0.84
SPCS3-204ENST00000513139 RGPD5Q99666 1765 aa20.27■□□□□ 0.84
SPCS3-204ENST00000513139 PROM2Q8N271 834 aa20.27■□□□□ 0.84
SPCS3-204ENST00000513139 PTGER2P43116 358 aa20.26■□□□□ 0.83
SPCS3-204ENST00000513139 SRPK2P78362 688 aaKnown RBP20.26■□□□□ 0.83
SPCS3-204ENST00000513139 TOM1L2Q6ZVM7 507 aa20.26■□□□□ 0.83
SPCS3-204ENST00000513139 USP6P35125 1406 aa20.26■□□□□ 0.83
SPCS3-204ENST00000513139 NLRP6P59044 892 aa20.25■□□□□ 0.83
SPCS3-204ENST00000513139 PDGFDQ9GZP0 370 aaPredicted RBP20.25■□□□□ 0.83
SPCS3-204ENST00000513139 PIK3C2AO00443 1686 aa20.25■□□□□ 0.83
SPCS3-204ENST00000513139 WDR17Q8IZU2 1322 aa20.25■□□□□ 0.83
SPCS3-204ENST00000513139 QRICH2Q9H0J4 1663 aa20.24■□□□□ 0.83
SPCS3-204ENST00000513139 PTF1AQ7RTS3 328 aa20.24■□□□□ 0.83
SPCS3-204ENST00000513139 MARCH10Q8NA82 808 aaPredicted RBP20.24■□□□□ 0.83
SPCS3-204ENST00000513139 ZNF784Q8NCA9 323 aaPredicted RBP20.24■□□□□ 0.83
SPCS3-204ENST00000513139 ZBTB7AO95365 584 aa20.23■□□□□ 0.83
SPCS3-204ENST00000513139 ZBTB7CA1YPR0 619 aa20.22■□□□□ 0.83
SPCS3-204ENST00000513139 HOXD11P31277 338 aaPredicted RBP20.22■□□□□ 0.83
SPCS3-204ENST00000513139 CENPJQ9HC77 1338 aaPredicted RBP20.22■□□□□ 0.83
SPCS3-204ENST00000513139 TXNRD1Q16881 649 aa20.21■□□□□ 0.83
SPCS3-204ENST00000513139 CABP2Q9NPB3 220 aa20.21■□□□□ 0.83
SPCS3-204ENST00000513139 STK32BQ9NY57 414 aa20.21■□□□□ 0.83
SPCS3-204ENST00000513139 CPSF1Q10570 1443 aaKnown RBP20.2■□□□□ 0.82
SPCS3-204ENST00000513139 SLC15A2Q16348 729 aa20.2■□□□□ 0.82
SPCS3-204ENST00000513139 NBPF1Q3BBV0 1214 aa20.2■□□□□ 0.82
SPCS3-204ENST00000513139 SYT17Q9BSW7 474 aa20.2■□□□□ 0.82
SPCS3-204ENST00000513139 CABP1Q9NZU7 370 aa20.2■□□□□ 0.82
SPCS3-204ENST00000513139 ATF5Q9Y2D1 282 aaPredicted RBP20.2■□□□□ 0.82
SPCS3-204ENST00000513139 AXIN2Q9Y2T1 843 aa20.2■□□□□ 0.82
SPCS3-204ENST00000513139 CARD10Q9BWT7 1032 aa20.19■□□□□ 0.82
SPCS3-204ENST00000513139 MTFR1LQ9H019 292 aa20.19■□□□□ 0.82
SPCS3-204ENST00000513139 ARHGEF25Q86VW2 580 aa20.18■□□□□ 0.82
SPCS3-204ENST00000513139 FHDC1Q9C0D6 1143 aaPredicted RBP20.18■□□□□ 0.82
SPCS3-204ENST00000513139 NHSQ6T4R5 1651 aa20.18■□□□□ 0.82
SPCS3-204ENST00000513139 KAT6BQ8WYB5 2073 aa20.17■□□□□ 0.82
SPCS3-204ENST00000513139 TRPM1Q7Z4N2 1603 aa20.17■□□□□ 0.82
SPCS3-204ENST00000513139 KCNH5Q8NCM2 988 aa20.17■□□□□ 0.82
SPCS3-204ENST00000513139 SGIP1Q9BQI5 828 aa20.17■□□□□ 0.82
SPCS3-204ENST00000513139 EXOC5O00471 708 aa20.16■□□□□ 0.82
SPCS3-204ENST00000513139 ABCC6O95255 1503 aa20.16■□□□□ 0.82
SPCS3-204ENST00000513139 CCDC7Q96M83 1385 aa20.14■□□□□ 0.81
SPCS3-204ENST00000513139 MAP3K5Q99683 1374 aa20.14■□□□□ 0.81
SPCS3-204ENST00000513139 TNS2Q63HR2 1409 aa20.13■□□□□ 0.81
SPCS3-204ENST00000513139 ZNF692Q9BU19 519 aaPredicted RBP20.13■□□□□ 0.81
SPCS3-204ENST00000513139 PAPPAQ13219 1627 aa20.13■□□□□ 0.81
SPCS3-204ENST00000513139 CSB-PGBD3P0DP91 1061 aa20.12■□□□□ 0.81
SPCS3-204ENST00000513139 GOLGB1Q14789 3259 aaKnown RBP20.12■□□□□ 0.81
SPCS3-204ENST00000513139 BTAF1O14981 1849 aa20.11■□□□□ 0.81
SPCS3-204ENST00000513139 EVC2Q86UK5 1308 aa20.11■□□□□ 0.81
SPCS3-204ENST00000513139 C1QTNF8P60827 252 aa20.11■□□□□ 0.81
SPCS3-204ENST00000513139 NFAT5O94916 1531 aa20.11■□□□□ 0.81
SPCS3-204ENST00000513139 TTC21BQ7Z4L5 1316 aa20.1■□□□□ 0.81
SPCS3-204ENST00000513139 TTC21AQ8NDW8 1320 aa20.1■□□□□ 0.81
SPCS3-204ENST00000513139 ARXQ96QS3 562 aa20.1■□□□□ 0.81
SPCS3-204ENST00000513139 QSER1Q2KHR3 1735 aa20.1■□□□□ 0.81
SPCS3-204ENST00000513139 SENP3-EIF4A1A0A087X0R7 540 aa20.09■□□□□ 0.81
SPCS3-204ENST00000513139 COL24A1Q17RW2 1714 aa20.08■□□□□ 0.81
SPCS3-204ENST00000513139 USP54Q70EL1 1684 aa20.07■□□□□ 0.8
SPCS3-204ENST00000513139 CEP350Q5VT06 3117 aa20.06■□□□□ 0.8
SPCS3-204ENST00000513139 LTN1O94822 1766 aa20.06■□□□□ 0.8
SPCS3-204ENST00000513139 MON2Q7Z3U7 1717 aa20.05■□□□□ 0.8
SPCS3-204ENST00000513139 SOX12O15370 315 aa20.04■□□□□ 0.8
SPCS3-204ENST00000513139 SLC16A10Q8TF71 515 aa20.03■□□□□ 0.8
SPCS3-204ENST00000513139 ACSBG1Q96GR2 724 aa20.02■□□□□ 0.8
SPCS3-204ENST00000513139 ERBB3P21860 1342 aa20.02■□□□□ 0.79
SPCS3-204ENST00000513139 KTN1Q86UP2 1357 aaKnown RBP20.01■□□□□ 0.79
SPCS3-204ENST00000513139 IL2RBP14784 551 aa20.01■□□□□ 0.79
SPCS3-204ENST00000513139 GPR162Q16538 588 aa20.01■□□□□ 0.79
SPCS3-204ENST00000513139 USP31Q70CQ4 1352 aa19.99■□□□□ 0.79
SPCS3-204ENST00000513139 ZNF827Q17R98 1081 aa19.99■□□□□ 0.79
SPCS3-204ENST00000513139 LRRC4BQ9NT99 713 aa19.99■□□□□ 0.79
SPCS3-204ENST00000513139 NLRP2Q9NX02 1062 aa19.99■□□□□ 0.79
SPCS3-204ENST00000513139 TUBGCP6Q96RT7 1819 aa19.99■□□□□ 0.79
SPCS3-204ENST00000513139 SLC27A3Q5K4L6 730 aa19.98■□□□□ 0.79
SPCS3-204ENST00000513139 GIGYF1O75420 1035 aaPredicted RBP19.97■□□□□ 0.79
SPCS3-204ENST00000513139 AKT1S1Q96B36 256 aa19.97■□□□□ 0.79
SPCS3-204ENST00000513139 POLD1P28340 1107 aa19.96■□□□□ 0.79
SPCS3-204ENST00000513139 FAM208AQ9UK61 1670 aaKnown RBP19.96■□□□□ 0.79
SPCS3-204ENST00000513139 SHANK3Q9BYB0 1731 aa19.95■□□□□ 0.78
SPCS3-204ENST00000513139 LY75O60449 1722 aa19.94■□□□□ 0.78
SPCS3-204ENST00000513139 IFFO2Q5TF58 517 aa19.94■□□□□ 0.78
SPCS3-204ENST00000513139 ANKRD24Q8TF21 1146 aa19.93■□□□□ 0.78
SPCS3-204ENST00000513139 L3MBTL2Q969R5 705 aa19.93■□□□□ 0.78
SPCS3-204ENST00000513139 PNPLA7Q6ZV29 1317 aa19.92■□□□□ 0.78
SPCS3-204ENST00000513139 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.91■□□□□ 0.78
SPCS3-204ENST00000513139 ROCK2O75116 1388 aaKnown RBP19.91■□□□□ 0.78
SPCS3-204ENST00000513139 KLHL34Q8N239 644 aa19.9■□□□□ 0.78
SPCS3-204ENST00000513139 SBNO2Q9Y2G9 1366 aa19.9■□□□□ 0.78
SPCS3-204ENST00000513139 CD163L1Q9NR16 1453 aa19.9■□□□□ 0.78
SPCS3-204ENST00000513139 NME9Q86XW9 330 aa19.89■□□□□ 0.77
SPCS3-204ENST00000513139 TFCP2L1Q9NZI6 479 aa19.89■□□□□ 0.77
SPCS3-204ENST00000513139 DOT1LQ8TEK3 1739 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms