RNA–Protein interactions for RNA: ENST00000512923.5

SSBP2-216, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-216ENST00000512923 COG3Q96JB2 828 aa13.67□□□□□ -0.22
SSBP2-216ENST00000512923 PHRF1Q9P1Y6 1649 aaKnown RBP13.67□□□□□ -0.22
SSBP2-216ENST00000512923 CRYBG1Q9Y4K1 1723 aa13.67□□□□□ -0.22
SSBP2-216ENST00000512923 RALBP1Q15311 655 aa13.66□□□□□ -0.22
SSBP2-216ENST00000512923 LMOD2Q6P5Q4 547 aa13.66□□□□□ -0.22
SSBP2-216ENST00000512923 PRKRIP1Q9H875 184 aaPredicted RBP13.66□□□□□ -0.22
SSBP2-216ENST00000512923 COL22A1Q8NFW1 1626 aaPredicted RBP13.66□□□□□ -0.22
SSBP2-216ENST00000512923 ABCA3Q99758 1704 aa13.66□□□□□ -0.22
SSBP2-216ENST00000512923 NLRP6P59044 892 aa13.65□□□□□ -0.22
SSBP2-216ENST00000512923 MORC1Q86VD1 984 aa13.65□□□□□ -0.22
SSBP2-216ENST00000512923 NLRP13Q86W25 1043 aa13.65□□□□□ -0.22
SSBP2-216ENST00000512923 PHF12Q96QT6 1004 aa13.65□□□□□ -0.22
SSBP2-216ENST00000512923 SLIT3O75094 1523 aa13.65□□□□□ -0.22
SSBP2-216ENST00000512923 POTEIP0CG38 1075 aa13.64□□□□□ -0.23
SSBP2-216ENST00000512923 LRRC59Q96AG4 307 aaKnown RBP13.64□□□□□ -0.23
SSBP2-216ENST00000512923 SHPRHQ149N8 1683 aa13.64□□□□□ -0.23
SSBP2-216ENST00000512923 USP19O94966 1318 aa13.63□□□□□ -0.23
SSBP2-216ENST00000512923 NUTM2GQ5VZR2 741 aa13.63□□□□□ -0.23
SSBP2-216ENST00000512923 MYBBP1AQ9BQG0 1328 aaKnown RBP13.62□□□□□ -0.23
SSBP2-216ENST00000512923 NFAT5O94916 1531 aa13.62□□□□□ -0.23
SSBP2-216ENST00000512923 LTN1O94822 1766 aa13.62□□□□□ -0.23
SSBP2-216ENST00000512923 AATKQ6ZMQ8 1374 aa13.62□□□□□ -0.23
SSBP2-216ENST00000512923 KCNH5Q8NCM2 988 aa13.62□□□□□ -0.23
SSBP2-216ENST00000512923 MAP2P11137 1827 aaKnown RBP13.61□□□□□ -0.23
SSBP2-216ENST00000512923 PNPLA6Q8IY17 1366 aa13.61□□□□□ -0.23
SSBP2-216ENST00000512923 TNNT2P45379 298 aaPredicted RBP13.61□□□□□ -0.23
SSBP2-216ENST00000512923 GALR2O43603 387 aaPredicted RBP13.6□□□□□ -0.23
SSBP2-216ENST00000512923 PPP2R1AP30153 589 aa13.59□□□□□ -0.23
SSBP2-216ENST00000512923 SMG6Q86US8 1419 aaKnown RBP13.59□□□□□ -0.23
SSBP2-216ENST00000512923 JCADQ9P266 1359 aa13.58□□□□□ -0.24
SSBP2-216ENST00000512923 SOX12O15370 315 aa13.58□□□□□ -0.24
SSBP2-216ENST00000512923 MIER1Q8N108 512 aa13.58□□□□□ -0.24
SSBP2-216ENST00000512923 PLEKHG5O94827 1062 aa13.57□□□□□ -0.24
SSBP2-216ENST00000512923 GCP02774 474 aa13.57□□□□□ -0.24
SSBP2-216ENST00000512923 HSPA1LP34931 641 aa13.57□□□□□ -0.24
SSBP2-216ENST00000512923 HAP1P54257 671 aaPredicted RBP13.57□□□□□ -0.24
SSBP2-216ENST00000512923 CDK12Q9NYV4 1490 aaPredicted RBP13.57□□□□□ -0.24
SSBP2-216ENST00000512923 ABCC6O95255 1503 aa13.56□□□□□ -0.24
SSBP2-216ENST00000512923 KIF24Q5T7B8 1368 aa13.56□□□□□ -0.24
SSBP2-216ENST00000512923 CLCN6P51797 869 aa13.56□□□□□ -0.24
SSBP2-216ENST00000512923 FBXO41Q8TF61 875 aa13.56□□□□□ -0.24
SSBP2-216ENST00000512923 PEAK1Q9H792 1746 aa13.56□□□□□ -0.24
SSBP2-216ENST00000512923 RTL1A6NKG5 1358 aa13.55□□□□□ -0.24
SSBP2-216ENST00000512923 CABLES1Q8TDN4 633 aa13.55□□□□□ -0.24
SSBP2-216ENST00000512923 POLKQ9UBT6 870 aa13.55□□□□□ -0.24
SSBP2-216ENST00000512923 CPDO75976 1380 aa13.54□□□□□ -0.24
SSBP2-216ENST00000512923 CCER2I3L3R5 266 aa13.54□□□□□ -0.24
SSBP2-216ENST00000512923 MTHFSP49914 203 aa13.54□□□□□ -0.24
SSBP2-216ENST00000512923 RRS1Q15050 365 aaKnown RBP13.54□□□□□ -0.24
SSBP2-216ENST00000512923 TSPYL2Q9H2G4 693 aaPredicted RBP13.54□□□□□ -0.24
SSBP2-216ENST00000512923 MAP3K19Q56UN5 1328 aa13.54□□□□□ -0.24
SSBP2-216ENST00000512923 FLT4P35916 1363 aa13.54□□□□□ -0.24
SSBP2-216ENST00000512923 PPM1GO15355 546 aaPredicted RBP13.53□□□□□ -0.24
SSBP2-216ENST00000512923 FBLN1P23142 703 aa13.53□□□□□ -0.24
SSBP2-216ENST00000512923 CFAP53Q96M91 514 aa13.53□□□□□ -0.24
SSBP2-216ENST00000512923 EMILIN1Q9Y6C2 1016 aa13.53□□□□□ -0.24
SSBP2-216ENST00000512923 SPATA31A6Q5VVP1 1343 aa13.53□□□□□ -0.24
SSBP2-216ENST00000512923 COL14A1Q05707 1796 aaKnown RBP13.53□□□□□ -0.24
SSBP2-216ENST00000512923 AMPHP49418 695 aa13.52□□□□□ -0.25
SSBP2-216ENST00000512923 ZC3H6P61129 1189 aaKnown RBP13.52□□□□□ -0.25
SSBP2-216ENST00000512923 ARHGEF25Q86VW2 580 aa13.52□□□□□ -0.25
SSBP2-216ENST00000512923 DCBLD2Q96PD2 775 aa13.52□□□□□ -0.25
SSBP2-216ENST00000512923 KIAA0232Q92628 1395 aa13.52□□□□□ -0.25
SSBP2-216ENST00000512923 LMO7Q8WWI1 1683 aa13.51□□□□□ -0.25
SSBP2-216ENST00000512923 COL18A1P39060 1754 aa13.51□□□□□ -0.25
SSBP2-216ENST00000512923 ZBTB7CA1YPR0 619 aa13.51□□□□□ -0.25
SSBP2-216ENST00000512923 PLCD3Q8N3E9 789 aa13.51□□□□□ -0.25
SSBP2-216ENST00000512923 MRS2Q9HD23 443 aa13.51□□□□□ -0.25
SSBP2-216ENST00000512923 BLMP54132 1417 aaPredicted RBP13.51□□□□□ -0.25
SSBP2-216ENST00000512923 COL3A1P02461 1466 aaPredicted RBP13.51□□□□□ -0.25
SSBP2-216ENST00000512923 RGPD5Q99666 1765 aa13.51□□□□□ -0.25
SSBP2-216ENST00000512923 HOXC9P31274 260 aa13.5□□□□□ -0.25
SSBP2-216ENST00000512923 INSRP06213 1382 aa13.5□□□□□ -0.25
SSBP2-216ENST00000512923 PLCH1Q4KWH8 1693 aa13.5□□□□□ -0.25
SSBP2-216ENST00000512923 FAM208AQ9UK61 1670 aaKnown RBP13.5□□□□□ -0.25
SSBP2-216ENST00000512923 PRDM11Q9NQV5 511 aa13.49□□□□□ -0.25
SSBP2-216ENST00000512923 NUTM2BA6NNL0 878 aaPredicted RBP13.48□□□□□ -0.25
SSBP2-216ENST00000512923 NUTM2EB1AL46 878 aaPredicted RBP13.48□□□□□ -0.25
SSBP2-216ENST00000512923 NUTM2AQ8IVF1 878 aaPredicted RBP13.48□□□□□ -0.25
SSBP2-216ENST00000512923 IP6K1Q92551 441 aa13.48□□□□□ -0.25
SSBP2-216ENST00000512923 NWD2Q9ULI1 1742 aa13.48□□□□□ -0.25
SSBP2-216ENST00000512923 CCDC184Q52MB2 194 aa13.47□□□□□ -0.25
SSBP2-216ENST00000512923 LRP6O75581 1613 aa13.47□□□□□ -0.25
SSBP2-216ENST00000512923 RGPD1P0DJD0 1748 aa13.46□□□□□ -0.25
SSBP2-216ENST00000512923 DIAPH1O60610 1272 aaKnown RBP13.46□□□□□ -0.25
SSBP2-216ENST00000512923 CHRNA2Q15822 529 aa13.46□□□□□ -0.25
SSBP2-216ENST00000512923 HSP90AB2PQ58FF8 381 aa13.46□□□□□ -0.25
SSBP2-216ENST00000512923 RASEFQ8IZ41 740 aa13.46□□□□□ -0.25
SSBP2-216ENST00000512923 CAMTA1Q9Y6Y1 1673 aa13.46□□□□□ -0.26
SSBP2-216ENST00000512923 ADAMTS2O95450 1211 aa13.45□□□□□ -0.26
SSBP2-216ENST00000512923 LHX8Q68G74 356 aa13.45□□□□□ -0.26
SSBP2-216ENST00000512923 MS4A3Q96HJ5 214 aa13.45□□□□□ -0.26
SSBP2-216ENST00000512923 NUDCQ9Y266 331 aa13.45□□□□□ -0.26
SSBP2-216ENST00000512923 COL5A2P05997 1499 aaPredicted RBP13.45□□□□□ -0.26
SSBP2-216ENST00000512923 NRAPQ86VF7 1730 aa13.45□□□□□ -0.26
SSBP2-216ENST00000512923 EIF4A2Q14240 407 aaKnown RBP13.44□□□□□ -0.26
SSBP2-216ENST00000512923 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.26
SSBP2-216ENST00000512923 ERBB3P21860 1342 aa13.44□□□□□ -0.26
SSBP2-216ENST00000512923 FAM83GA6ND36 823 aa13.43□□□□□ -0.26
SSBP2-216ENST00000512923 AXIN2Q9Y2T1 843 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms