RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 SAFB2Q14151 953 aaKnown RBP eCLIP14.87□□□□□ -0.03
NEDD9-213ENST00000512665 DNAJC5GQ8N7S2 189 aa14.87□□□□□ -0.03
NEDD9-213ENST00000512665 CDCA7Q9BWT1 371 aaPredicted RBP14.87□□□□□ -0.03
NEDD9-213ENST00000512665 YBX3P16989 372 aaKnown RBP eCLIP14.86□□□□□ -0.03
NEDD9-213ENST00000512665 POGKQ9P215 609 aa14.86□□□□□ -0.03
NEDD9-213ENST00000512665 NHSQ6T4R5 1651 aa14.85□□□□□ -0.03
NEDD9-213ENST00000512665 WASLO00401 505 aaPredicted RBP14.85□□□□□ -0.03
NEDD9-213ENST00000512665 POLD1P28340 1107 aa14.85□□□□□ -0.03
NEDD9-213ENST00000512665 PELP1Q8IZL8 1130 aaKnown RBP14.85□□□□□ -0.03
NEDD9-213ENST00000512665 MARCH10Q8NA82 808 aaPredicted RBP14.85□□□□□ -0.03
NEDD9-213ENST00000512665 POLR3AO14802 1390 aaPredicted RBP14.85□□□□□ -0.03
NEDD9-213ENST00000512665 LOC105371045A0A1W2PR82 267 aa14.84□□□□□ -0.03
NEDD9-213ENST00000512665 RGL3Q3MIN7 710 aa14.84□□□□□ -0.03
NEDD9-213ENST00000512665 ADGRB1O14514 1584 aa14.83□□□□□ -0.04
NEDD9-213ENST00000512665 ITGAEP38570 1179 aa14.83□□□□□ -0.04
NEDD9-213ENST00000512665 COL13A1Q5TAT6 717 aaPredicted RBP14.83□□□□□ -0.04
NEDD9-213ENST00000512665 NLGN2Q8NFZ4 835 aa14.83□□□□□ -0.04
NEDD9-213ENST00000512665 SLC4A1APQ9BWU0 796 aaKnown RBP14.83□□□□□ -0.04
NEDD9-213ENST00000512665 BRD4O60885 1362 aaPredicted RBP14.82□□□□□ -0.04
NEDD9-213ENST00000512665 CFAP70Q5T0N1 1121 aa14.81□□□□□ -0.04
NEDD9-213ENST00000512665 HIRIP3Q9BW71 556 aaPredicted RBP14.81□□□□□ -0.04
NEDD9-213ENST00000512665 ZNF827Q17R98 1081 aa14.8□□□□□ -0.04
NEDD9-213ENST00000512665 PCDH10Q9P2E7 1040 aa14.8□□□□□ -0.04
NEDD9-213ENST00000512665 KIF3CO14782 793 aa14.79□□□□□ -0.04
NEDD9-213ENST00000512665 CAPN15O75808 1086 aa14.79□□□□□ -0.04
NEDD9-213ENST00000512665 GCP02774 474 aa14.79□□□□□ -0.04
NEDD9-213ENST00000512665 NUTM2GQ5VZR2 741 aa14.79□□□□□ -0.04
NEDD9-213ENST00000512665 TNS4Q8IZW8 715 aa14.79□□□□□ -0.04
NEDD9-213ENST00000512665 KLHL34Q8N239 644 aa14.79□□□□□ -0.04
NEDD9-213ENST00000512665 JMYQ8N9B5 988 aa14.79□□□□□ -0.04
NEDD9-213ENST00000512665 MINK1Q8N4C8 1332 aaPredicted RBP14.78□□□□□ -0.04
NEDD9-213ENST00000512665 AKT1S1Q96B36 256 aa14.78□□□□□ -0.04
NEDD9-213ENST00000512665 TRPM1Q7Z4N2 1603 aa14.77□□□□□ -0.04
NEDD9-213ENST00000512665 TNS2Q63HR2 1409 aa14.77□□□□□ -0.04
NEDD9-213ENST00000512665 WDR17Q8IZU2 1322 aa14.77□□□□□ -0.04
NEDD9-213ENST00000512665 ARHGEF28Q8N1W1 1705 aaKnown RBP14.76□□□□□ -0.05
NEDD9-213ENST00000512665 NLRP13Q86W25 1043 aa14.76□□□□□ -0.05
NEDD9-213ENST00000512665 ABTB2Q8N961 1025 aa14.76□□□□□ -0.05
NEDD9-213ENST00000512665 NUDT16Q96DE0 195 aaKnown RBP14.76□□□□□ -0.05
NEDD9-213ENST00000512665 ABCC6O95255 1503 aa14.76□□□□□ -0.05
NEDD9-213ENST00000512665 COL18A1P39060 1754 aa14.75□□□□□ -0.05
NEDD9-213ENST00000512665 WDR90Q96KV7 1748 aa14.75□□□□□ -0.05
NEDD9-213ENST00000512665 TOM1L2Q6ZVM7 507 aa14.75□□□□□ -0.05
NEDD9-213ENST00000512665 SLIT3O75094 1523 aa14.75□□□□□ -0.05
NEDD9-213ENST00000512665 PNPLA7Q6ZV29 1317 aa14.74□□□□□ -0.05
NEDD9-213ENST00000512665 BTAF1O14981 1849 aa14.74□□□□□ -0.05
NEDD9-213ENST00000512665 PCNTO95613 3336 aa14.74□□□□□ -0.05
NEDD9-213ENST00000512665 ZNF526Q8TF50 670 aaPredicted RBP14.74□□□□□ -0.05
NEDD9-213ENST00000512665 ACEP12821 1306 aa14.73□□□□□ -0.05
NEDD9-213ENST00000512665 PLEKHG3A1L390 1219 aa14.73□□□□□ -0.05
NEDD9-213ENST00000512665 TOMM70O94826 608 aa14.73□□□□□ -0.05
NEDD9-213ENST00000512665 LRRC4BQ9NT99 713 aa14.73□□□□□ -0.05
NEDD9-213ENST00000512665 TUBGCP6Q96RT7 1819 aa14.72□□□□□ -0.05
NEDD9-213ENST00000512665 EXOC5O00471 708 aa14.72□□□□□ -0.05
NEDD9-213ENST00000512665 SLC27A3Q5K4L6 730 aa14.72□□□□□ -0.05
NEDD9-213ENST00000512665 KLRG1Q96E93 195 aa14.72□□□□□ -0.05
NEDD9-213ENST00000512665 CARD10Q9BWT7 1032 aa14.72□□□□□ -0.05
NEDD9-213ENST00000512665 USP6P35125 1406 aa14.72□□□□□ -0.05
NEDD9-213ENST00000512665 TRAK1Q9UPV9 953 aa14.71□□□□□ -0.05
NEDD9-213ENST00000512665 CD2APQ9Y5K6 639 aa14.71□□□□□ -0.05
NEDD9-213ENST00000512665 CCDC61Q9Y6R9 512 aa14.7□□□□□ -0.06
NEDD9-213ENST00000512665 CCDC7Q96M83 1385 aa14.7□□□□□ -0.06
NEDD9-213ENST00000512665 CICQ96RK0 1608 aaPredicted RBP14.7□□□□□ -0.06
NEDD9-213ENST00000512665 CPSF1Q10570 1443 aaKnown RBP14.68□□□□□ -0.06
NEDD9-213ENST00000512665 PPIP5K1Q6PFW1 1433 aa14.66□□□□□ -0.06
NEDD9-213ENST00000512665 TFCP2L1Q9NZI6 479 aa14.66□□□□□ -0.06
NEDD9-213ENST00000512665 AXIN2Q9Y2T1 843 aa14.66□□□□□ -0.06
NEDD9-213ENST00000512665 RBM46Q8TBY0 533 aaKnown RBP14.64□□□□□ -0.07
NEDD9-213ENST00000512665 ACSBG1Q96GR2 724 aa14.64□□□□□ -0.07
NEDD9-213ENST00000512665 WWC3Q9ULE0 1092 aa14.64□□□□□ -0.07
NEDD9-213ENST00000512665 PIK3C2AO00443 1686 aa14.63□□□□□ -0.07
NEDD9-213ENST00000512665 CDK19Q9BWU1 502 aa14.63□□□□□ -0.07
NEDD9-213ENST00000512665 LY75O60449 1722 aa14.62□□□□□ -0.07
NEDD9-213ENST00000512665 ARHGEF25Q86VW2 580 aa14.62□□□□□ -0.07
NEDD9-213ENST00000512665 ZBTB7CA1YPR0 619 aa14.6□□□□□ -0.07
NEDD9-213ENST00000512665 FSTL1Q12841 308 aa14.6□□□□□ -0.07
NEDD9-213ENST00000512665 RGPD5Q99666 1765 aa14.6□□□□□ -0.07
NEDD9-213ENST00000512665 CSB-PGBD3P0DP91 1061 aa14.59□□□□□ -0.07
NEDD9-213ENST00000512665 NLRP6P59044 892 aa14.59□□□□□ -0.07
NEDD9-213ENST00000512665 MPHOSPH9Q99550 1183 aa14.59□□□□□ -0.07
NEDD9-213ENST00000512665 C10orf71Q711Q0 1435 aa14.58□□□□□ -0.08
NEDD9-213ENST00000512665 COL23A1Q86Y22 540 aaPredicted RBP14.57□□□□□ -0.08
NEDD9-213ENST00000512665 KCNH5Q8NCM2 988 aa14.57□□□□□ -0.08
NEDD9-213ENST00000512665 STAC3Q96MF2 364 aa14.57□□□□□ -0.08
NEDD9-213ENST00000512665 IGSF1Q8N6C5 1336 aa14.57□□□□□ -0.08
NEDD9-213ENST00000512665 QRICH2Q9H0J4 1663 aa14.56□□□□□ -0.08
NEDD9-213ENST00000512665 NFAT5O94916 1531 aa14.56□□□□□ -0.08
NEDD9-213ENST00000512665 IL2RBP14784 551 aa14.55□□□□□ -0.08
NEDD9-213ENST00000512665 HTRA3P83110 453 aa14.55□□□□□ -0.08
NEDD9-213ENST00000512665 HSPA1AP0DMV8 641 aaKnown RBP14.54□□□□□ -0.08
NEDD9-213ENST00000512665 HSPA1BP0DMV9 641 aaKnown RBP14.54□□□□□ -0.08
NEDD9-213ENST00000512665 NMRK2Q9NPI5 230 aa14.54□□□□□ -0.08
NEDD9-213ENST00000512665 ANKRD36BQ8N2N9 1353 aa14.53□□□□□ -0.08
NEDD9-213ENST00000512665 HMGB2P26583 209 aaKnown RBP14.53□□□□□ -0.08
NEDD9-213ENST00000512665 FLAD1Q8NFF5 587 aa14.53□□□□□ -0.08
NEDD9-213ENST00000512665 NSD2O96028 1365 aa14.52□□□□□ -0.08
NEDD9-213ENST00000512665 ERBB3P21860 1342 aa14.52□□□□□ -0.08
NEDD9-213ENST00000512665 MSL1Q68DK7 614 aa14.52□□□□□ -0.09
NEDD9-213ENST00000512665 USP54Q70EL1 1684 aa14.52□□□□□ -0.09
NEDD9-213ENST00000512665 PLEKHG2Q9H7P9 1386 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms