RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 TSPYL2Q9H2G4 693 aaPredicted RBP12.88□□□□□ -0.35
MSH3-203ENST00000512531 KIF7Q2M1P5 1343 aa12.88□□□□□ -0.35
MSH3-203ENST00000512531 SF3B2Q13435 895 aaKnown RBP12.87□□□□□ -0.35
MSH3-203ENST00000512531 LMOD2Q6P5Q4 547 aa12.87□□□□□ -0.35
MSH3-203ENST00000512531 SEPT12Q8IYM1 358 aa12.87□□□□□ -0.35
MSH3-203ENST00000512531 EIF3AQ14152 1382 aaKnown RBP12.85□□□□□ -0.35
MSH3-203ENST00000512531 PPP1R37O75864 691 aa12.85□□□□□ -0.35
MSH3-203ENST00000512531 TMEM132AQ24JP5 1023 aa12.85□□□□□ -0.35
MSH3-203ENST00000512531 ADGRB2O60241 1585 aa12.85□□□□□ -0.35
MSH3-203ENST00000512531 PDAP1Q13442 181 aaKnown RBP12.84□□□□□ -0.35
MSH3-203ENST00000512531 CDCA8Q53HL2 280 aa12.84□□□□□ -0.35
MSH3-203ENST00000512531 CFAP70Q5T0N1 1121 aa12.84□□□□□ -0.35
MSH3-203ENST00000512531 KRT27Q7Z3Y8 459 aa12.84□□□□□ -0.35
MSH3-203ENST00000512531 PRAM1Q96QH2 718 aa12.84□□□□□ -0.35
MSH3-203ENST00000512531 PRKRIP1Q9H875 184 aaPredicted RBP12.84□□□□□ -0.35
MSH3-203ENST00000512531 BRWD3Q6RI45 1802 aa12.83□□□□□ -0.35
MSH3-203ENST00000512531 ZNF467Q7Z7K2 595 aaPredicted RBP12.83□□□□□ -0.36
MSH3-203ENST00000512531 RGPD8O14715 1765 aaPredicted RBP12.83□□□□□ -0.36
MSH3-203ENST00000512531 TRPM1Q7Z4N2 1603 aa12.83□□□□□ -0.36
MSH3-203ENST00000512531 PLCH1Q4KWH8 1693 aa12.83□□□□□ -0.36
MSH3-203ENST00000512531 GPRASP1Q5JY77 1395 aa12.82□□□□□ -0.36
MSH3-203ENST00000512531 FAM83GA6ND36 823 aa12.82□□□□□ -0.36
MSH3-203ENST00000512531 POLR3GLQ9BT43 218 aa12.82□□□□□ -0.36
MSH3-203ENST00000512531 POGKQ9P215 609 aa12.82□□□□□ -0.36
MSH3-203ENST00000512531 ABCA3Q99758 1704 aa12.82□□□□□ -0.36
MSH3-203ENST00000512531 CABLES1Q8TDN4 633 aa12.81□□□□□ -0.36
MSH3-203ENST00000512531 MRS2Q9HD23 443 aa12.81□□□□□ -0.36
MSH3-203ENST00000512531 ADGRB1O14514 1584 aa12.81□□□□□ -0.36
MSH3-203ENST00000512531 LRP5O75197 1615 aa12.8□□□□□ -0.36
MSH3-203ENST00000512531 BAG6P46379 1132 aa12.8□□□□□ -0.36
MSH3-203ENST00000512531 TMF1P82094 1093 aa12.8□□□□□ -0.36
MSH3-203ENST00000512531 DEFB132Q7Z7B7 95 aa12.8□□□□□ -0.36
MSH3-203ENST00000512531 CCDC9Q9Y3X0 531 aaKnown RBP12.8□□□□□ -0.36
MSH3-203ENST00000512531 CCDC61Q9Y6R9 512 aa12.8□□□□□ -0.36
MSH3-203ENST00000512531 TRPM3Q9HCF6 1732 aaPredicted RBP12.79□□□□□ -0.36
MSH3-203ENST00000512531 RALBP1Q15311 655 aa12.79□□□□□ -0.36
MSH3-203ENST00000512531 NRAPQ86VF7 1730 aa12.79□□□□□ -0.36
MSH3-203ENST00000512531 COL14A1Q05707 1796 aaKnown RBP12.79□□□□□ -0.36
MSH3-203ENST00000512531 TULP4Q9NRJ4 1543 aa12.78□□□□□ -0.36
MSH3-203ENST00000512531 ALS2Q96Q42 1657 aa12.78□□□□□ -0.36
MSH3-203ENST00000512531 PSEN1P49768 467 aa12.78□□□□□ -0.36
MSH3-203ENST00000512531 HNRNPUQ00839 825 aaKnown RBP eCLIP12.78□□□□□ -0.36
MSH3-203ENST00000512531 PMFBP1Q8TBY8 1022 aa12.78□□□□□ -0.36
MSH3-203ENST00000512531 DISP2A7MBM2 1401 aa12.78□□□□□ -0.36
MSH3-203ENST00000512531 ST20-MTHFSA0A0A6YYL1 179 aa12.77□□□□□ -0.37
MSH3-203ENST00000512531 WASLO00401 505 aaPredicted RBP12.77□□□□□ -0.37
MSH3-203ENST00000512531 SAFB2Q14151 953 aaKnown RBP eCLIP12.77□□□□□ -0.37
MSH3-203ENST00000512531 WDR70Q9NW82 654 aa12.77□□□□□ -0.37
MSH3-203ENST00000512531 BTG4Q9NY30 223 aa12.77□□□□□ -0.37
MSH3-203ENST00000512531 FARP1Q9Y4F1 1045 aaPredicted RBP12.77□□□□□ -0.37
MSH3-203ENST00000512531 SPATA31A5Q5VU36 1347 aa12.77□□□□□ -0.37
MSH3-203ENST00000512531 SPATA31A7Q8IWB4 1347 aa12.77□□□□□ -0.37
MSH3-203ENST00000512531 FBXO22Q8NEZ5 403 aa12.76□□□□□ -0.37
MSH3-203ENST00000512531 C11orf95C9JLR9 678 aaPredicted RBP12.75□□□□□ -0.37
MSH3-203ENST00000512531 FAM98CQ17RN3 349 aaKnown RBP12.75□□□□□ -0.37
MSH3-203ENST00000512531 PRR36Q9H6K5 1346 aa12.75□□□□□ -0.37
MSH3-203ENST00000512531 KIAA1210Q9ULL0 1709 aa12.75□□□□□ -0.37
MSH3-203ENST00000512531 BRPF1P55201 1214 aaPredicted RBP12.74□□□□□ -0.37
MSH3-203ENST00000512531 TRAK1Q9UPV9 953 aa12.74□□□□□ -0.37
MSH3-203ENST00000512531 RGPD1P0DJD0 1748 aa12.74□□□□□ -0.37
MSH3-203ENST00000512531 ZNF579Q8NAF0 562 aaKnown RBP12.73□□□□□ -0.37
MSH3-203ENST00000512531 NGDNQ8NEJ9 315 aaKnown RBP12.73□□□□□ -0.37
MSH3-203ENST00000512531 TMC1Q8TDI8 760 aa12.73□□□□□ -0.37
MSH3-203ENST00000512531 CRYBG1Q9Y4K1 1723 aa12.73□□□□□ -0.37
MSH3-203ENST00000512531 THSD7AQ9UPZ6 1657 aa12.73□□□□□ -0.37
MSH3-203ENST00000512531 ATP7BP35670 1465 aa12.72□□□□□ -0.37
MSH3-203ENST00000512531 PARD3Q8TEW0 1356 aa12.72□□□□□ -0.37
MSH3-203ENST00000512531 MINK1Q8N4C8 1332 aaPredicted RBP12.72□□□□□ -0.37
MSH3-203ENST00000512531 A0A0G2JS52 829 aa12.72□□□□□ -0.37
MSH3-203ENST00000512531 MYT1Q01538 1121 aa12.72□□□□□ -0.37
MSH3-203ENST00000512531 ERICH6BQ5W0A0 696 aa12.72□□□□□ -0.37
MSH3-203ENST00000512531 PRDM11Q9NQV5 511 aa12.72□□□□□ -0.37
MSH3-203ENST00000512531 SUPT16HQ9Y5B9 1047 aaKnown RBP12.72□□□□□ -0.37
MSH3-203ENST00000512531 BRD4O60885 1362 aaPredicted RBP12.71□□□□□ -0.37
MSH3-203ENST00000512531 SPATA31A1Q5TZJ5 1347 aa12.71□□□□□ -0.37
MSH3-203ENST00000512531 ZBED9Q6R2W3 1325 aa12.71□□□□□ -0.37
MSH3-203ENST00000512531 MYBBP1AQ9BQG0 1328 aaKnown RBP12.71□□□□□ -0.37
MSH3-203ENST00000512531 ITSN1Q15811 1721 aa12.71□□□□□ -0.38
MSH3-203ENST00000512531 POLR3AO14802 1390 aaPredicted RBP12.7□□□□□ -0.38
MSH3-203ENST00000512531 FAM196AQ6ZSG2 479 aa12.7□□□□□ -0.38
MSH3-203ENST00000512531 IFNL1Q8IU54 200 aa12.7□□□□□ -0.38
MSH3-203ENST00000512531 FAM9BQ8IZU0 186 aa12.7□□□□□ -0.38
MSH3-203ENST00000512531 EFCAB3Q8N7B9 438 aa12.7□□□□□ -0.38
MSH3-203ENST00000512531 ZC3H15Q8WU90 426 aaKnown RBP12.7□□□□□ -0.38
MSH3-203ENST00000512531 NUDT16Q96DE0 195 aaKnown RBP12.7□□□□□ -0.38
MSH3-203ENST00000512531 EN1Q05925 392 aaPredicted RBP12.69□□□□□ -0.38
MSH3-203ENST00000512531 BARGINQ6ZT62 677 aa12.69□□□□□ -0.38
MSH3-203ENST00000512531 KIAA0232Q92628 1395 aa12.69□□□□□ -0.38
MSH3-203ENST00000512531 PLEKHG3A1L390 1219 aa12.68□□□□□ -0.38
MSH3-203ENST00000512531 SEMA3EO15041 775 aa12.68□□□□□ -0.38
MSH3-203ENST00000512531 PAK3O75914 559 aaPredicted RBP12.68□□□□□ -0.38
MSH3-203ENST00000512531 ARHGEF1Q92888 912 aaKnown RBP12.68□□□□□ -0.38
MSH3-203ENST00000512531 PSDA5PKW4 1024 aaPredicted RBP12.67□□□□□ -0.38
MSH3-203ENST00000512531 NLRP13Q86W25 1043 aa12.67□□□□□ -0.38
MSH3-203ENST00000512531 CAMKK2Q96RR4 588 aa12.67□□□□□ -0.38
MSH3-203ENST00000512531 ARHGEF28Q8N1W1 1705 aaKnown RBP12.67□□□□□ -0.38
MSH3-203ENST00000512531 TNS1Q9HBL0 1735 aaKnown RBP12.67□□□□□ -0.38
MSH3-203ENST00000512531 CPDO75976 1380 aa12.67□□□□□ -0.38
MSH3-203ENST00000512531 TESPA1A2RU30 521 aaPredicted RBP12.66□□□□□ -0.38
MSH3-203ENST00000512531 NBPF1Q3BBV0 1214 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms