RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 TRMT44Q8IYL2 757 aaKnown RBP9.22□□□□□ -0.93
MSH3-202ENST00000512258 WIZO95785 1651 aa9.22□□□□□ -0.93
MSH3-202ENST00000512258 FIGNL2A6NMB9 653 aa9.21□□□□□ -0.94
MSH3-202ENST00000512258 IGHA1P01876 353 aa9.21□□□□□ -0.94
MSH3-202ENST00000512258 SH3BP5LQ7L8J4 393 aa9.21□□□□□ -0.94
MSH3-202ENST00000512258 CABLES1Q8TDN4 633 aa9.2□□□□□ -0.94
MSH3-202ENST00000512258 ATAD2BQ9ULI0 1458 aa9.2□□□□□ -0.94
MSH3-202ENST00000512258 SUPT5HO00267 1087 aaKnown RBP9.19□□□□□ -0.94
MSH3-202ENST00000512258 SPINT1O43278 529 aa9.19□□□□□ -0.94
MSH3-202ENST00000512258 TTLL12Q14166 644 aaPredicted RBP9.19□□□□□ -0.94
MSH3-202ENST00000512258 Q6ZVU0 165 aa9.19□□□□□ -0.94
MSH3-202ENST00000512258 CCDC116Q8IYX3 515 aa9.19□□□□□ -0.94
MSH3-202ENST00000512258 ZBTB3Q9H5J0 574 aa9.19□□□□□ -0.94
MSH3-202ENST00000512258 EMILIN1Q9Y6C2 1016 aa9.19□□□□□ -0.94
MSH3-202ENST00000512258 CBLBQ13191 982 aa9.18□□□□□ -0.94
MSH3-202ENST00000512258 XP32Q5T750 250 aa9.18□□□□□ -0.94
MSH3-202ENST00000512258 VASH1Q7L8A9 365 aaPredicted RBP9.18□□□□□ -0.94
MSH3-202ENST00000512258 VWA5B2Q8N398 1253 aa9.18□□□□□ -0.94
MSH3-202ENST00000512258 PEG3Q9GZU2 1588 aa9.17□□□□□ -0.94
MSH3-202ENST00000512258 TULP1O00294 542 aaPredicted RBP9.17□□□□□ -0.94
MSH3-202ENST00000512258 ITGA6P23229 1130 aa9.17□□□□□ -0.94
MSH3-202ENST00000512258 PRPF38BQ5VTL8 546 aaKnown RBP9.17□□□□□ -0.94
MSH3-202ENST00000512258 KANK3Q6NY19 840 aa9.16□□□□□ -0.94
MSH3-202ENST00000512258 SMARCA2P51531 1590 aa9.16□□□□□ -0.94
MSH3-202ENST00000512258 FOXK2Q01167 660 aa9.15□□□□□ -0.94
MSH3-202ENST00000512258 PPP1R26Q5T8A7 1209 aaPredicted RBP9.15□□□□□ -0.94
MSH3-202ENST00000512258 LYPD4Q6UWN0 246 aa9.15□□□□□ -0.94
MSH3-202ENST00000512258 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.15□□□□□ -0.94
MSH3-202ENST00000512258 ITGB2P05107 769 aa9.14□□□□□ -0.95
MSH3-202ENST00000512258 BARGINQ6ZT62 677 aa9.14□□□□□ -0.95
MSH3-202ENST00000512258 NCAPD3P42695 1498 aa9.14□□□□□ -0.95
MSH3-202ENST00000512258 SENP3-EIF4A1A0A087X0R7 540 aa9.13□□□□□ -0.95
MSH3-202ENST00000512258 RIC3Q7Z5B4 369 aa9.13□□□□□ -0.95
MSH3-202ENST00000512258 ADAMTS2O95450 1211 aa9.12□□□□□ -0.95
MSH3-202ENST00000512258 CTSOP43234 321 aaPredicted RBP9.12□□□□□ -0.95
MSH3-202ENST00000512258 MARSP56192 900 aaKnown RBP9.12□□□□□ -0.95
MSH3-202ENST00000512258 DIXDC1Q155Q3 683 aa9.12□□□□□ -0.95
MSH3-202ENST00000512258 QPCTQ16769 361 aa9.12□□□□□ -0.95
MSH3-202ENST00000512258 ERFEQ4G0M1 354 aa9.12□□□□□ -0.95
MSH3-202ENST00000512258 SV2AQ7L0J3 742 aa9.12□□□□□ -0.95
MSH3-202ENST00000512258 ARMC2Q8NEN0 867 aa9.12□□□□□ -0.95
MSH3-202ENST00000512258 BAZ1BQ9UIG0 1483 aaKnown RBP9.12□□□□□ -0.95
MSH3-202ENST00000512258 MAGEB6P1A0A0J9YX57 407 aa9.11□□□□□ -0.95
MSH3-202ENST00000512258 CDC14CA4D256 554 aa9.11□□□□□ -0.95
MSH3-202ENST00000512258 NBPF14Q5TI25 921 aa9.11□□□□□ -0.95
MSH3-202ENST00000512258 PARP9Q8IXQ6 854 aa9.11□□□□□ -0.95
MSH3-202ENST00000512258 SCARF2Q96GP6 870 aaPredicted RBP9.11□□□□□ -0.95
MSH3-202ENST00000512258 HMGXB3Q12766 1538 aa9.1□□□□□ -0.95
MSH3-202ENST00000512258 ZMYND10O75800 440 aa9.1□□□□□ -0.95
MSH3-202ENST00000512258 GAS6Q14393 721 aa9.1□□□□□ -0.95
MSH3-202ENST00000512258 CSPP1Q1MSJ5 1256 aa9.1□□□□□ -0.95
MSH3-202ENST00000512258 LIMD1Q9UGP4 676 aa9.1□□□□□ -0.95
MSH3-202ENST00000512258 ADAM23O75077 832 aa9.09□□□□□ -0.95
MSH3-202ENST00000512258 AGBL1Q96MI9 1066 aa9.09□□□□□ -0.95
MSH3-202ENST00000512258 TOP2AP11388 1531 aaKnown RBP9.09□□□□□ -0.95
MSH3-202ENST00000512258 LILRB3O75022 631 aa9.08□□□□□ -0.96
MSH3-202ENST00000512258 CELA2BP08218 269 aaPredicted RBP9.08□□□□□ -0.96
MSH3-202ENST00000512258 PLA2G4EQ3MJ16 856 aa9.08□□□□□ -0.96
MSH3-202ENST00000512258 INSM2Q96T92 566 aaPredicted RBP9.08□□□□□ -0.96
MSH3-202ENST00000512258 CARD14Q9BXL6 1004 aa9.08□□□□□ -0.96
MSH3-202ENST00000512258 CUEDC1Q9NWM3 386 aaPredicted RBP9.08□□□□□ -0.96
MSH3-202ENST00000512258 PGPEP1Q9NXJ5 209 aa9.08□□□□□ -0.96
MSH3-202ENST00000512258 SRSF11Q05519 484 aaKnown RBP9.07□□□□□ -0.96
MSH3-202ENST00000512258 RNF217Q8TC41 542 aa9.07□□□□□ -0.96
MSH3-202ENST00000512258 TUSC1Q2TAM9 212 aa9.06□□□□□ -0.96
MSH3-202ENST00000512258 TSC1Q92574 1164 aa9.06□□□□□ -0.96
MSH3-202ENST00000512258 KRTAP4-8Q9BYQ9 185 aa9.06□□□□□ -0.96
MSH3-202ENST00000512258 HAP1P54257 671 aaPredicted RBP9.05□□□□□ -0.96
MSH3-202ENST00000512258 GPKOWQ92917 476 aaPredicted RBP eCLIP9.05□□□□□ -0.96
MSH3-202ENST00000512258 DCAF5Q96JK2 942 aa9.05□□□□□ -0.96
MSH3-202ENST00000512258 SPOCK3Q9BQ16 436 aa9.05□□□□□ -0.96
MSH3-202ENST00000512258 PROCP04070 461 aa9.04□□□□□ -0.96
MSH3-202ENST00000512258 RELBQ01201 579 aa9.04□□□□□ -0.96
MSH3-202ENST00000512258 RTL5Q5HYW3 569 aaPredicted RBP9.04□□□□□ -0.96
MSH3-202ENST00000512258 MYSM1Q5VVJ2 828 aa9.04□□□□□ -0.96
MSH3-202ENST00000512258 KCTD15Q96SI1 283 aaPredicted RBP9.04□□□□□ -0.96
MSH3-202ENST00000512258 MSTNO14793 375 aa9.03□□□□□ -0.96
MSH3-202ENST00000512258 INTS6LQ5JSJ4 861 aaKnown RBP9.03□□□□□ -0.96
MSH3-202ENST00000512258 FOXD4L5Q5VV16 416 aaPredicted RBP9.03□□□□□ -0.96
MSH3-202ENST00000512258 CNTNAP5Q8WYK1 1306 aa9.03□□□□□ -0.96
MSH3-202ENST00000512258 KDF1Q8NAX2 398 aaPredicted RBP9.02□□□□□ -0.97
MSH3-202ENST00000512258 OCSTAMPQ9BR26 566 aa9.02□□□□□ -0.97
MSH3-202ENST00000512258 ZNF395Q9H8N7 513 aaPredicted RBP9.01□□□□□ -0.97
MSH3-202ENST00000512258 POLMQ9NP87 494 aaPredicted RBP9.01□□□□□ -0.97
MSH3-202ENST00000512258 CCDC88BA6NC98 1476 aa9.01□□□□□ -0.97
MSH3-202ENST00000512258 NUTM2BA6NNL0 878 aaPredicted RBP9□□□□□ -0.97
MSH3-202ENST00000512258 NUTM2EB1AL46 878 aaPredicted RBP9□□□□□ -0.97
MSH3-202ENST00000512258 TRIM66O15016 1216 aa9□□□□□ -0.97
MSH3-202ENST00000512258 NUTM2DQ5VT03 806 aaPredicted RBP9□□□□□ -0.97
MSH3-202ENST00000512258 PDXDC2PQ6P474 469 aa9□□□□□ -0.97
MSH3-202ENST00000512258 NUTM2AQ8IVF1 878 aaPredicted RBP9□□□□□ -0.97
MSH3-202ENST00000512258 ZC3H15Q8WU90 426 aaKnown RBP9□□□□□ -0.97
MSH3-202ENST00000512258 MAP3K10Q02779 954 aa8.99□□□□□ -0.97
MSH3-202ENST00000512258 DHX9Q08211 1270 aaKnown RBP8.99□□□□□ -0.97
MSH3-202ENST00000512258 HELBQ8NG08 1087 aaPredicted RBP8.98□□□□□ -0.97
MSH3-202ENST00000512258 ARHGAP9Q9BRR9 750 aa8.98□□□□□ -0.97
MSH3-202ENST00000512258 ADD1P35611 737 aaKnown RBP8.97□□□□□ -0.97
MSH3-202ENST00000512258 SLC10A4Q96EP9 437 aa8.97□□□□□ -0.97
MSH3-202ENST00000512258 TMPRSS4Q9NRS4 437 aa8.97□□□□□ -0.97
MSH3-202ENST00000512258 CDV3Q9UKY7 258 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms