RNA–Protein interactions for RNA: ENST00000512094.5

NPHP3-210, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-210ENST00000512094 CNTNAP3Q9BZ76 1288 aa12.16□□□□□ -0.46
NPHP3-210ENST00000512094 PGPEP1Q9NXJ5 209 aa12.16□□□□□ -0.46
NPHP3-210ENST00000512094 LOC100996750A0A140TA64 210 aa12.15□□□□□ -0.46
NPHP3-210ENST00000512094 FIGNL2A6NMB9 653 aa12.15□□□□□ -0.46
NPHP3-210ENST00000512094 CBLBQ13191 982 aa12.15□□□□□ -0.46
NPHP3-210ENST00000512094 KRTAP4-6Q9BYQ5 205 aa12.15□□□□□ -0.46
NPHP3-210ENST00000512094 GSK3AP49840 483 aa12.13□□□□□ -0.47
NPHP3-210ENST00000512094 Q6ZVU0 165 aa12.13□□□□□ -0.47
NPHP3-210ENST00000512094 KCTD17Q8N5Z5 321 aa12.13□□□□□ -0.47
NPHP3-210ENST00000512094 SPINT1O43278 529 aa12.12□□□□□ -0.47
NPHP3-210ENST00000512094 ARHGAP9Q9BRR9 750 aa12.12□□□□□ -0.47
NPHP3-210ENST00000512094 CCDC155Q8N6L0 562 aa12.11□□□□□ -0.47
NPHP3-210ENST00000512094 SLC10A4Q96EP9 437 aa12.11□□□□□ -0.47
NPHP3-210ENST00000512094 COL25A1Q9BXS0 654 aaPredicted RBP12.11□□□□□ -0.47
NPHP3-210ENST00000512094 CTDSPL2Q05D32 466 aa12.1□□□□□ -0.47
NPHP3-210ENST00000512094 POLR3EQ9NVU0 708 aa12.1□□□□□ -0.47
NPHP3-210ENST00000512094 PDXDC2PQ6P474 469 aa12.09□□□□□ -0.47
NPHP3-210ENST00000512094 NANOS1Q8WY41 292 aaKnown RBP12.09□□□□□ -0.47
NPHP3-210ENST00000512094 KCTD15Q96SI1 283 aaPredicted RBP12.09□□□□□ -0.47
NPHP3-210ENST00000512094 RNF225M0QZC1 329 aaPredicted RBP12.08□□□□□ -0.48
NPHP3-210ENST00000512094 SUZ12Q15022 739 aaKnown RBP12.08□□□□□ -0.48
NPHP3-210ENST00000512094 TMEM151AQ8N4L1 468 aa12.08□□□□□ -0.48
NPHP3-210ENST00000512094 RSPH6AQ9H0K4 717 aa12.08□□□□□ -0.48
NPHP3-210ENST00000512094 CDV3Q9UKY7 258 aaKnown RBP12.08□□□□□ -0.48
NPHP3-210ENST00000512094 ADAMTS8Q9UP79 889 aa12.08□□□□□ -0.48
NPHP3-210ENST00000512094 DHX9Q08211 1270 aaKnown RBP12.07□□□□□ -0.48
NPHP3-210ENST00000512094 SLC24A3Q9HC58 644 aa12.07□□□□□ -0.48
NPHP3-210ENST00000512094 FKBPLQ9UIM3 349 aa12.07□□□□□ -0.48
NPHP3-210ENST00000512094 RASSF7Q02833 373 aa12.06□□□□□ -0.48
NPHP3-210ENST00000512094 RNFT1Q5M7Z0 435 aa12.06□□□□□ -0.48
NPHP3-210ENST00000512094 SLC35F4A4IF30 521 aa12.05□□□□□ -0.48
NPHP3-210ENST00000512094 GDF11O95390 407 aa12.05□□□□□ -0.48
NPHP3-210ENST00000512094 ZNF385CQ66K41 422 aaPredicted RBP12.05□□□□□ -0.48
NPHP3-210ENST00000512094 ZBTB33Q86T24 672 aa12.05□□□□□ -0.48
NPHP3-210ENST00000512094 SVOPQ8N4V2 548 aa12.05□□□□□ -0.48
NPHP3-210ENST00000512094 LRRN4Q8WUT4 740 aa12.05□□□□□ -0.48
NPHP3-210ENST00000512094 AGBL1Q96MI9 1066 aa12.05□□□□□ -0.48
NPHP3-210ENST00000512094 CTSOP43234 321 aaPredicted RBP12.04□□□□□ -0.48
NPHP3-210ENST00000512094 RELBQ01201 579 aa12.04□□□□□ -0.48
NPHP3-210ENST00000512094 CDC14CA4D256 554 aa12.03□□□□□ -0.48
NPHP3-210ENST00000512094 ITGA6P23229 1130 aa12.03□□□□□ -0.48
NPHP3-210ENST00000512094 INTS6LQ5JSJ4 861 aaKnown RBP12.03□□□□□ -0.48
NPHP3-210ENST00000512094 INSM2Q96T92 566 aaPredicted RBP12.02□□□□□ -0.49
NPHP3-210ENST00000512094 POLMQ9NP87 494 aaPredicted RBP12.02□□□□□ -0.49
NPHP3-210ENST00000512094 ZC3H4Q9UPT8 1303 aaKnown RBP12.02□□□□□ -0.49
NPHP3-210ENST00000512094 NR6A1Q15406 480 aa12.01□□□□□ -0.49
NPHP3-210ENST00000512094 VWA5B2Q8N398 1253 aa12.01□□□□□ -0.49
NPHP3-210ENST00000512094 SV2AQ7L0J3 742 aa12□□□□□ -0.49
NPHP3-210ENST00000512094 PTK2Q05397 1052 aa11.99□□□□□ -0.49
NPHP3-210ENST00000512094 WHAMMQ8TF30 809 aa11.99□□□□□ -0.49
NPHP3-210ENST00000512094 SLURP2P0DP57 97 aa11.98□□□□□ -0.49
NPHP3-210ENST00000512094 RNF217Q8TC41 542 aa11.98□□□□□ -0.49
NPHP3-210ENST00000512094 OCSTAMPQ9BR26 566 aa11.98□□□□□ -0.49
NPHP3-210ENST00000512094 ZNF395Q9H8N7 513 aaPredicted RBP11.97□□□□□ -0.49
NPHP3-210ENST00000512094 NBPF20Q3BBV1 942 aa11.96□□□□□ -0.49
NPHP3-210ENST00000512094 FBXO31Q5XUX0 539 aaPredicted RBP11.96□□□□□ -0.49
NPHP3-210ENST00000512094 ADAM32Q8TC27 787 aa11.96□□□□□ -0.49
NPHP3-210ENST00000512094 TMPRSS4Q9NRS4 437 aa11.96□□□□□ -0.49
NPHP3-210ENST00000512094 RAB15P59190 212 aa11.95□□□□□ -0.5
NPHP3-210ENST00000512094 GPSM3Q9Y4H4 160 aa11.95□□□□□ -0.5
NPHP3-210ENST00000512094 SENP3-EIF4A1A0A087X0R7 540 aa11.94□□□□□ -0.5
NPHP3-210ENST00000512094 ARHGEF15O94989 841 aa11.94□□□□□ -0.5
NPHP3-210ENST00000512094 ZNF784Q8NCA9 323 aaPredicted RBP11.94□□□□□ -0.5
NPHP3-210ENST00000512094 ADH1AP07327 375 aa11.93□□□□□ -0.5
NPHP3-210ENST00000512094 IRS1P35568 1242 aa11.93□□□□□ -0.5
NPHP3-210ENST00000512094 SKIV2LQ15477 1246 aaKnown RBP11.93□□□□□ -0.5
NPHP3-210ENST00000512094 FOXD4L5Q5VV16 416 aaPredicted RBP11.92□□□□□ -0.5
NPHP3-210ENST00000512094 ATP1B4Q9UN42 357 aaPredicted RBP11.92□□□□□ -0.5
NPHP3-210ENST00000512094 AP1G2O75843 785 aa11.91□□□□□ -0.5
NPHP3-210ENST00000512094 MARSP56192 900 aaKnown RBP11.91□□□□□ -0.5
NPHP3-210ENST00000512094 SH3D19Q5HYK7 790 aa11.9□□□□□ -0.5
NPHP3-210ENST00000512094 PPP2R2DQ66LE6 453 aa11.9□□□□□ -0.5
NPHP3-210ENST00000512094 PROCA1Q8NCQ7 364 aaPredicted RBP11.9□□□□□ -0.5
NPHP3-210ENST00000512094 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.9□□□□□ -0.5
NPHP3-210ENST00000512094 DNMT3AQ9Y6K1 912 aaPredicted RBP11.9□□□□□ -0.5
NPHP3-210ENST00000512094 ADAMTS2O95450 1211 aa11.89□□□□□ -0.51
NPHP3-210ENST00000512094 DZIP3Q86Y13 1208 aaKnown RBP11.89□□□□□ -0.51
NPHP3-210ENST00000512094 PNMA1Q8ND90 353 aa11.89□□□□□ -0.51
NPHP3-210ENST00000512094 ERVH48-1M5A8F1 160 aa11.88□□□□□ -0.51
NPHP3-210ENST00000512094 LILRA1O75019 489 aa11.88□□□□□ -0.51
NPHP3-210ENST00000512094 ADD1P35611 737 aaKnown RBP11.88□□□□□ -0.51
NPHP3-210ENST00000512094 PTGIRP43119 386 aa11.88□□□□□ -0.51
NPHP3-210ENST00000512094 GPAT2Q6NUI2 795 aa11.88□□□□□ -0.51
NPHP3-210ENST00000512094 EPS8L1Q8TE68 723 aa11.88□□□□□ -0.51
NPHP3-210ENST00000512094 LYSMD3Q7Z3D4 306 aa11.87□□□□□ -0.51
NPHP3-210ENST00000512094 MAP3K10Q02779 954 aa11.86□□□□□ -0.51
NPHP3-210ENST00000512094 KANK3Q6NY19 840 aa11.86□□□□□ -0.51
NPHP3-210ENST00000512094 LYPD4Q6UWN0 246 aa11.86□□□□□ -0.51
NPHP3-210ENST00000512094 KDF1Q8NAX2 398 aaPredicted RBP11.86□□□□□ -0.51
NPHP3-210ENST00000512094 SCARF2Q96GP6 870 aaPredicted RBP11.86□□□□□ -0.51
NPHP3-210ENST00000512094 HMX1Q9NP08 348 aaPredicted RBP11.86□□□□□ -0.51
NPHP3-210ENST00000512094 CUEDC1Q9NWM3 386 aaPredicted RBP11.86□□□□□ -0.51
NPHP3-210ENST00000512094 SRSF11Q05519 484 aaKnown RBP11.85□□□□□ -0.51
NPHP3-210ENST00000512094 USP17L8P0C7I0 530 aa11.84□□□□□ -0.51
NPHP3-210ENST00000512094 GAS6Q14393 721 aa11.84□□□□□ -0.51
NPHP3-210ENST00000512094 ESPNB1AK53 854 aa11.83□□□□□ -0.52
NPHP3-210ENST00000512094 CYLDQ9NQC7 956 aa11.83□□□□□ -0.52
NPHP3-210ENST00000512094 IGHA1P01876 353 aa11.82□□□□□ -0.52
NPHP3-210ENST00000512094 DDRGK1Q96HY6 314 aa11.82□□□□□ -0.52
NPHP3-210ENST00000512094 CELA2BP08218 269 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms